# STOCKHOLM 1.0 #=GF ID 4.10.410.10/FF/000020 #=GF DE Collagen, type VI, alpha 3 #=GF AC 4.10.410.10/FF/000020 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 93.616 #=GS O76840/1607-1681 AC O76840 #=GS O76840/1607-1681 OS Caenorhabditis elegans #=GS O76840/1607-1681 DE Papilin #=GS O76840/1607-1681 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS O76840/1607-1681 DR GO; GO:0000902; GO:0002119; GO:0005604; GO:0009792; GO:0032504; GO:0048598; #=GS Q868Z9/1845-1911 AC Q868Z9 #=GS Q868Z9/1845-1911 OS Drosophila melanogaster #=GS Q868Z9/1845-1911 DE Papilin #=GS Q868Z9/1845-1911 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q868Z9/1845-1911 DR GO; GO:0005201; GO:0005604; GO:0030198; #=GS F1QMR9/222-292 AC F1QMR9 #=GS F1QMR9/222-292 OS Danio rerio #=GS F1QMR9/222-292 DE Collagen, type VI, alpha 3 #=GS F1QMR9/222-292 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS F1QMR9/222-292 DR GO; GO:0008045; GO:0048675; #=GS F1Q924/2473-2541 AC F1Q924 #=GS F1Q924/2473-2541 OS Danio rerio #=GS F1Q924/2473-2541 DE Collagen, type VI, alpha 4a #=GS F1Q924/2473-2541 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS F1Q924/2473-2541 DR GO; GO:0007409; GO:0007517; #=GS G5ED57/14-80 AC G5ED57 #=GS G5ED57/14-80 OS Caenorhabditis elegans #=GS G5ED57/14-80 DE Uncharacterized protein #=GS G5ED57/14-80 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS T1FSK9/505-571 AC T1FSK9 #=GS T1FSK9/505-571 OS Helobdella robusta #=GS T1FSK9/505-571 DE Uncharacterized protein #=GS T1FSK9/505-571 DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; #=GS E9FR49/15-65 AC E9FR49 #=GS E9FR49/15-65 OS Daphnia pulex #=GS E9FR49/15-65 DE Uncharacterized protein #=GS E9FR49/15-65 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; #=GS F6ZS44/2281-2348 AC F6ZS44 #=GS F6ZS44/2281-2348 OS Equus caballus #=GS F6ZS44/2281-2348 DE Uncharacterized protein #=GS F6ZS44/2281-2348 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; #=GS G1KCV9/2976-3047 AC G1KCV9 #=GS G1KCV9/2976-3047 OS Anolis carolinensis #=GS G1KCV9/2976-3047 DE Uncharacterized protein #=GS G1KCV9/2976-3047 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; #=GS H2LW08/2538-2610 AC H2LW08 #=GS H2LW08/2538-2610 OS Oryzias latipes #=GS H2LW08/2538-2610 DE Uncharacterized protein #=GS H2LW08/2538-2610 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS E3MQS3/17-82 AC E3MQS3 #=GS E3MQS3/17-82 OS Caenorhabditis remanei #=GS E3MQS3/17-82 DE Uncharacterized protein #=GS E3MQS3/17-82 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A2G5TII1/27-94 AC A0A2G5TII1 #=GS A0A2G5TII1/27-94 OS Caenorhabditis nigoni #=GS A0A2G5TII1/27-94 DE Uncharacterized protein #=GS A0A2G5TII1/27-94 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A1I7T4M8/14-81 AC A0A1I7T4M8 #=GS A0A1I7T4M8/14-81 OS Caenorhabditis tropicalis #=GS A0A1I7T4M8/14-81 DE Uncharacterized protein #=GS A0A1I7T4M8/14-81 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A261BV77/17-82 AC A0A261BV77 #=GS A0A261BV77/17-82 OS Caenorhabditis latens #=GS A0A261BV77/17-82 DE Uncharacterized protein #=GS A0A261BV77/17-82 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS G0N8W4/14-81 AC G0N8W4 #=GS G0N8W4/14-81 OS Caenorhabditis brenneri #=GS G0N8W4/14-81 DE Uncharacterized protein #=GS G0N8W4/14-81 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A8X8P2/14-81 AC A8X8P2 #=GS A8X8P2/14-81 OS Caenorhabditis briggsae #=GS A8X8P2/14-81 DE Protein CBG09606 #=GS A8X8P2/14-81 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS F1Q4X1/2695-2765 AC F1Q4X1 #=GS F1Q4X1/2695-2765 OS Danio rerio #=GS F1Q4X1/2695-2765 DE Collagen, type VI, alpha 3 #=GS F1Q4X1/2695-2765 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS F1Q4X1/2695-2765 DR GO; GO:0008045; GO:0048675; #=GS F1QV92/161-231 AC F1QV92 #=GS F1QV92/161-231 OS Danio rerio #=GS F1QV92/161-231 DE Collagen, type VI, alpha 3 #=GS F1QV92/161-231 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS F1QV92/161-231 DR GO; GO:0008045; GO:0048675; #=GS F7BGN8/2080-2147 AC F7BGN8 #=GS F7BGN8/2080-2147 OS Equus caballus #=GS F7BGN8/2080-2147 DE Uncharacterized protein #=GS F7BGN8/2080-2147 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; #=GS A0A2R8Q996/2663-2733 AC A0A2R8Q996 #=GS A0A2R8Q996/2663-2733 OS Danio rerio #=GS A0A2R8Q996/2663-2733 DE Uncharacterized protein #=GS A0A2R8Q996/2663-2733 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS A0A2G5TJ57/23-90 AC A0A2G5TJ57 #=GS A0A2G5TJ57/23-90 OS Caenorhabditis nigoni #=GS A0A2G5TJ57/23-90 DE Uncharacterized protein #=GS A0A2G5TJ57/23-90 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A261ADZ8/17-82 AC A0A261ADZ8 #=GS A0A261ADZ8/17-82 OS Caenorhabditis remanei #=GS A0A261ADZ8/17-82 DE Uncharacterized protein #=GS A0A261ADZ8/17-82 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A0R1E806/1846-1912 AC A0A0R1E806 #=GS A0A0R1E806/1846-1912 OS Drosophila yakuba #=GS A0A0R1E806/1846-1912 DE Uncharacterized protein, isoform B #=GS A0A0R1E806/1846-1912 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS B4IH12/1841-1910 AC B4IH12 #=GS B4IH12/1841-1910 OS Drosophila sechellia #=GS B4IH12/1841-1910 DE GM16292 #=GS B4IH12/1841-1910 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS B3P5S6/1837-1905 AC B3P5S6 #=GS B3P5S6/1837-1905 OS Drosophila erecta #=GS B3P5S6/1837-1905 DE GG12068 #=GS B3P5S6/1837-1905 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; #=GS B4PQS4/1846-1912 AC B4PQS4 #=GS B4PQS4/1846-1912 OS Drosophila yakuba #=GS B4PQS4/1846-1912 DE Uncharacterized protein, isoform A #=GS B4PQS4/1846-1912 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS A0A0R1E5B8/1846-1912 AC A0A0R1E5B8 #=GS A0A0R1E5B8/1846-1912 OS Drosophila yakuba #=GS A0A0R1E5B8/1846-1912 DE Uncharacterized protein, isoform D #=GS A0A0R1E5B8/1846-1912 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS B4QYR5/1844-1913 AC B4QYR5 #=GS B4QYR5/1844-1913 OS Drosophila simulans #=GS B4QYR5/1844-1913 DE GD18032 #=GS B4QYR5/1844-1913 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GF SQ 28 O76840/1607-1681 AR-HHTP----DSEEERVDCYAVP--DPG-SCG-DYRLVWHYSATSNSCRQFYYGGCAGNTNRFETRDKCETSCVAKIEERVES-- Q868Z9/1845-1911 ---------------AKDICEIPA--EVG-ECA-NYVTSWYYDTQDQACRQFYYGGCGGNENRFPTEESCLARCDRKPEPTTTTPA F1QMR9/222-292 ------P-----VNTLLEPCSLDF--DTGLPCK-DYQAKWYFDRKNGFCTQFWYGGCGGNDNRFETESDCLKRCMKTVAEQRAAD- F1Q924/2473-2541 ------PQTQVETALFNDACLMKQ--DVG-PCS-NYVLSWYYDIQQNECSQFWFGGCEGNKNRFETRAECEALCLKDIQ------- G5ED57/14-80 --------VNSQQLLSNPKCNHWP--DRG-TCELDFHVKWYYDRYDHRCRRFFYGGCEGNENRFDSLEECSSQCHYQV-------- T1FSK9/505-571 -------------EPPRDVCLQQY--DAG-PCR-DFTMKFFWSKEHQACSTFYYGGCGGNDNRFETVGECEAACSPHASTTEAS-- E9FR49/15-65 ----------------IEICDLPPIENKGFEC---YALKHSWTFKSGKCVNYVYGGCLGTENLFDTEEAS---------------- F6ZS44/2281-2348 ------TGKKINSDTAYGPCSLDP--VEG-ECQ-DYVLKWYYDKEERACQQFWYGSCGGNANRFETKEECEAHCVPKP-------- G1KCV9/2976-3047 SEPLEGPNT--------DPCLLDL--DMGTQCK-EYQVKWFFDYKNKICTKVWYGGCGGNANRFETEADCISRCLKPSDEEVM--- H2LW08/2538-2610 ---LDNPQT---VSELADPCSLGF--DPGMPCK-DYQAKWYYERQNGFCTQFWYGGCGGNDNRFDSEALCLKRCLRSEVQLA---- E3MQS3/17-82 --------VTSQQLLSNPRCNHWP--DRG-TCELAFHVKWYYDRYDHRCRRFFYGGCEGNENRFDTLEECSSQCHYQ--------- A0A2G5TII1/27-94 -------AVNSQQLLSNPRCNHWP--DRG-TCELEFQVKWYYDRYDHRCRRFFYGGCEGNENRFNSLEECSSQCHYEE-------- A0A1I7T4M8/14-81 -------AVNSQQLLSNPKCNHWP--DRG-TCELAFHVKWYYDRYDHRCRRFFYGGCEGNENRFNSLEECSSQCHYEE-------- A0A261BV77/17-82 --------VSSQQLLSNPRCNHWP--DRG-TCELAFHVKWYYDRYDHRCRRFFYGGCEGNENRFGTLEECSSQCHYQ--------- G0N8W4/14-81 -------AVNSQQLLSNPRCNHWP--DRG-TCELAFHVKWYYDRYDHRCRRFFYGGCEGNENRFDTLEECTSQCHYEE-------- A8X8P2/14-81 -------AVNSQQLLSNPRCNHWP--DRG-TCELEFQVKWYYDRYDHRCRRFFYGGCEGNENRFNSLEECSSQCHYEE-------- F1Q4X1/2695-2765 ------P-----VNTLLEPCSLDF--DTGLPCK-DYQAKWYFDRKNGFCTQFWYGGCGGNDNRFETESDCLKRCMKTVAEQRAAD- F1QV92/161-231 ------P-----VNTLLEPCSLDF--DTGLPCK-DYQAKWYFDRKNGFCTQFWYGGCGGNDNRFETESDCLKRCMKTVAEQRAAD- F7BGN8/2080-2147 ------TGKKINSDTAYGPCSLDP--VEG-ECQ-DYVLKWYYDKEERACQQFWYGSCGGNANRFETKEECEAHCVPKP-------- A0A2R8Q996/2663-2733 ------P-----VNTLLEPCSLDF--DTGLPCK-DYQAKWYFDRKNGFCTQFWYGGCGGNDNRFETESDCLKRCMKTVAEQRAAD- A0A2G5TJ57/23-90 -------AVNSQQLLSNPRCNHWP--DRG-TCELEFQVKWYYDRYDHRCRRFFYGGCEGNENRFNSLEECSSQCHYEE-------- A0A261ADZ8/17-82 --------VTSQQLLSNPRCNHWP--DRG-TCELAFHVKWYYDRYDHRCRRFFYGGCEGNENRFDTLEECSSQCHYQ--------- A0A0R1E806/1846-1912 ------------RQVAKDICEIPA--EVG-ECA-NYVTSWYYDTQDQACRQFYYGGCGGNENRFATEESCLARCDRKPEPTTT--- B4IH12/1841-1910 ------------RQVAKDICEIPA--EVG-ECA-NYVTSWYYDTQDQACRQFYYGGCGGNENRFSTKESCLARCDRKPEPTTTTPA B3P5S6/1837-1905 ------------RQVAKDICEIPA--EVG-ECA-NYVSNWYYDTKDQACRQFYYGGCGGNENRFPTEESCLARCDRKPEPTTTTT- B4PQS4/1846-1912 ------------RQVAKDICEIPA--EVG-ECA-NYVTSWYYDTQDQACRQFYYGGCGGNENRFATEESCLARCDRKPEPTTT--- A0A0R1E5B8/1846-1912 ------------RQVAKDICEIPA--EVG-ECA-NYVTSWYYDTQDQACRQFYYGGCGGNENRFATEESCLARCDRKPEPTTT--- B4QYR5/1844-1913 ------------RQVAKDICEIPA--EVG-ECA-NYVTSWYYDTQDQACRQFYYGGCGGNENRFSTEESCLARCDRKPEPTTTTPA #=GC scorecons 00000000100122333439342400639049304734577774354394584898959859894745483448333211111000 #=GC scorecons_70 ___________________*______*_*__*___*___****_____*__*_****_**_***_*___*___*____________ #=GC scorecons_80 ___________________*________*__*___*___**_______*__*_****_**_***_*___*___*____________ #=GC scorecons_90 ___________________*________*__*________________*__*_****_**_***_____*________________ //