# STOCKHOLM 1.0
#=GF ID 4.10.400.10/FF/000188
#=GF DE Low-density lipoprotein receptor-related protein 2
#=GF AC 4.10.400.10/FF/000188
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 61.230
#=GS Q95SN5/924-963        AC Q95SN5
#=GS Q95SN5/924-963        OS Drosophila melanogaster
#=GS Q95SN5/924-963        DE GH12891p
#=GS Q95SN5/924-963        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q95SN5/924-963        DR GO; GO:0005829; GO:0005886; GO:0016324; GO:0030100; GO:0040003; GO:0048082; 
#=GS A8JTM7/3746-3780      AC A8JTM7
#=GS A8JTM7/3746-3780      OS Drosophila melanogaster
#=GS A8JTM7/3746-3780      DE Megalin, isoform A
#=GS A8JTM7/3746-3780      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A8JTM7/3746-3780      DR GO; GO:0005829; GO:0005886; GO:0016324; GO:0030100; GO:0040003; GO:0048082; 
#=GS C3Y9Z5/35-77          AC C3Y9Z5
#=GS C3Y9Z5/35-77          OS Branchiostoma floridae
#=GS C3Y9Z5/35-77          DE Uncharacterized protein
#=GS C3Y9Z5/35-77          DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A1J1HT29/3571-3605  AC A0A1J1HT29
#=GS A0A1J1HT29/3571-3605  OS Clunio marinus
#=GS A0A1J1HT29/3571-3605  DE CLUMA_CG004842, isoform A
#=GS A0A1J1HT29/3571-3605  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Chironomoidea; Chironomidae; Orthocladiinae; Clunio; Clunio marinus; 
#=GS A0A0K8VP55/3700-3734  AC A0A0K8VP55
#=GS A0A0K8VP55/3700-3734  OS Bactrocera latifrons
#=GS A0A0K8VP55/3700-3734  DE Low-density lipoprotein receptor-related protein 2
#=GS A0A0K8VP55/3700-3734  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Dacinae; Dacini; Bactrocera; Bactrocera; Bactrocera latifrons; 
#=GS W8B5F2/450-485        AC W8B5F2
#=GS W8B5F2/450-485        OS Ceratitis capitata
#=GS W8B5F2/450-485        DE Low-density lipoprotein receptor-related protein 2
#=GS W8B5F2/450-485        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Dacinae; Ceratitidini; Ceratitis; Ceratitis; Ceratitis capitata; 
#=GS B4M1F4/3724-3758      AC B4M1F4
#=GS B4M1F4/3724-3758      OS Drosophila virilis
#=GS B4M1F4/3724-3758      DE Uncharacterized protein
#=GS B4M1F4/3724-3758      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B3N075/3751-3789      AC B3N075
#=GS B3N075/3751-3789      OS Drosophila ananassae
#=GS B3N075/3751-3789      DE Uncharacterized protein
#=GS B3N075/3751-3789      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A3B0JXP9/3755-3794  AC A0A3B0JXP9
#=GS A0A3B0JXP9/3755-3794  OS Drosophila guanche
#=GS A0A3B0JXP9/3755-3794  DE Blast:Low-density lipoprotein receptor-related protein 2
#=GS A0A3B0JXP9/3755-3794  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B3NT74/3731-3770      AC B3NT74
#=GS B3NT74/3731-3770      OS Drosophila erecta
#=GS B3NT74/3731-3770      DE Uncharacterized protein
#=GS B3NT74/3731-3770      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4NE06/2702-2741      AC B4NE06
#=GS B4NE06/2702-2741      OS Drosophila willistoni
#=GS B4NE06/2702-2741      DE Uncharacterized protein
#=GS B4NE06/2702-2741      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4IDG0/1283-1322      AC B4IDG0
#=GS B4IDG0/1283-1322      OS Drosophila sechellia
#=GS B4IDG0/1283-1322      DE GM11366
#=GS B4IDG0/1283-1322      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4NTQ2/258-297        AC B4NTQ2
#=GS B4NTQ2/258-297        OS Drosophila simulans
#=GS B4NTQ2/258-297        DE GD24659
#=GS B4NTQ2/258-297        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS Q29ID0/3640-3675      AC Q29ID0
#=GS Q29ID0/3640-3675      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29ID0/3640-3675      DE Uncharacterized protein
#=GS Q29ID0/3640-3675      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A1W4VFV3/3751-3785  AC A0A1W4VFV3
#=GS A0A1W4VFV3/3751-3785  OS Drosophila ficusphila
#=GS A0A1W4VFV3/3751-3785  DE low-density lipoprotein receptor-related protein 2
#=GS A0A1W4VFV3/3751-3785  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4PWW3/3739-3773      AC B4PWW3
#=GS B4PWW3/3739-3773      OS Drosophila yakuba
#=GS B4PWW3/3739-3773      DE Uncharacterized protein
#=GS B4PWW3/3739-3773      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4L2N1/3580-3614      AC B4L2N1
#=GS B4L2N1/3580-3614      OS Drosophila mojavensis
#=GS B4L2N1/3580-3614      DE Uncharacterized protein
#=GS B4L2N1/3580-3614      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GF SQ 17
Q95SN5/924-963                L--PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
A8JTM7/3746-3780              -------SDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
C3Y9Z5/35-77                  LDDTCPEGDFKCHSHAVCIREGWRCDGENDCYDGSDE--LDCPET
A0A1J1HT29/3571-3605          ---------FKCKSSGRCILDSWRCDGDADCKDGSDEDPSVCHK-
A0A0K8VP55/3700-3734          ---------FKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCHK-
W8B5F2/450-485                ---------FKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCHKR
B4M1F4/3724-3758              -------SDFKCKTSGRCILDSWRCDGDADCKDGSDEDPLVC---
B3N075/3751-3789              ---PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
A0A3B0JXP9/3755-3794          L--PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
B3NT74/3731-3770              L--PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
B4NE06/2702-2741              L--PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
B4IDG0/1283-1322              L--PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
B4NTQ2/258-297                L--PCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
Q29ID0/3640-3675              -------SDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCF--
A0A1W4VFV3/3751-3785          -------SDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
B4PWW3/3739-3773              -------SDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVC---
B4L2N1/3580-3614              --------DFKCKTSGRCILDSWRCDGDADCKDGSDEDPLVCH--
#=GC scorecons                100111035999777769967799999779969999966569000
#=GC scorecons_70             _________******************************_**___
#=GC scorecons_80             _________*****_*_**_***********_*****____*___
#=GC scorecons_90             _________***_____**___*****__**_*****____*___
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