# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/000096
#=GF DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GF AC 4.10.280.10/FF/000096
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.343
#=GS Q9FT81/353-420      AC Q9FT81
#=GS Q9FT81/353-420      OS Arabidopsis thaliana
#=GS Q9FT81/353-420      DE Transcription factor TT8
#=GS Q9FT81/353-420      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FT81/353-420      DR GO; GO:0000976; GO:0003700; GO:0005515; GO:0009867; GO:0009962; GO:0010026; GO:0010214; GO:0031542; GO:0048316; GO:2000029; 
#=GS Q0V7X4/118-193      AC Q0V7X4
#=GS Q0V7X4/118-193      OS Arabidopsis thaliana
#=GS Q0V7X4/118-193      DE Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
#=GS Q0V7X4/118-193      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q0V7X4/118-193      DR GO; GO:0003700; GO:0005515; GO:0006355; GO:0010039; GO:0034756; GO:0071281; GO:0071369; GO:0071732; 
#=GS Q700E3/51-129       AC Q700E3
#=GS Q700E3/51-129       OS Arabidopsis thaliana
#=GS Q700E3/51-129       DE Transcription factor bHLH27
#=GS Q700E3/51-129       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q700E3/51-129       DR GO; GO:0003700; GO:0006355; 
#=GS F4KAJ5/48-117       AC F4KAJ5
#=GS F4KAJ5/48-117       OS Arabidopsis thaliana
#=GS F4KAJ5/48-117       DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS F4KAJ5/48-117       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4KAJ5/48-117       DR GO; GO:0003700; GO:0006355; 
#=GS C0SV65/118-193      AC C0SV65
#=GS C0SV65/118-193      OS Arabidopsis thaliana
#=GS C0SV65/118-193      DE Uncharacterized protein At2g28160
#=GS C0SV65/118-193      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8AYH9/118-193  AC A0A1P8AYH9
#=GS A0A1P8AYH9/118-193  OS Arabidopsis thaliana
#=GS A0A1P8AYH9/118-193  DE FER-like regulator of iron uptake
#=GS A0A1P8AYH9/118-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8B6K8/51-128   AC A0A1P8B6K8
#=GS A0A1P8B6K8/51-128   OS Arabidopsis thaliana
#=GS A0A1P8B6K8/51-128   DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS A0A1P8B6K8/51-128   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8B6L1/51-130   AC A0A1P8B6L1
#=GS A0A1P8B6L1/51-130   OS Arabidopsis thaliana
#=GS A0A1P8B6L1/51-130   DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS A0A1P8B6L1/51-130   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q2HIV9/48-117       AC Q2HIV9
#=GS Q2HIV9/48-117       OS Arabidopsis thaliana
#=GS Q2HIV9/48-117       DE Transcription factor bHLH35
#=GS Q2HIV9/48-117       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8BCX2/47-116   AC A0A1P8BCX2
#=GS A0A1P8BCX2/47-116   OS Arabidopsis thaliana
#=GS A0A1P8BCX2/47-116   DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS A0A1P8BCX2/47-116   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4KAJ4/47-116       AC F4KAJ4
#=GS F4KAJ4/47-116       OS Arabidopsis thaliana
#=GS F4KAJ4/47-116       DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS F4KAJ4/47-116       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A3N6RR57/117-192  AC A0A3N6RR57
#=GS A0A3N6RR57/117-192  OS Brassica cretica
#=GS A0A3N6RR57/117-192  DE Uncharacterized protein
#=GS A0A3N6RR57/117-192  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica cretica; 
#=GS V4LL51/116-191      AC V4LL51
#=GS V4LL51/116-191      OS Eutrema salsugineum
#=GS V4LL51/116-191      DE Uncharacterized protein
#=GS V4LL51/116-191      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS R0HDZ8/354-419      AC R0HDZ8
#=GS R0HDZ8/354-419      OS Capsella rubella
#=GS R0HDZ8/354-419      DE Uncharacterized protein
#=GS R0HDZ8/354-419      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7LXD5/353-420      AC D7LXD5
#=GS D7LXD5/353-420      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LXD5/353-420      DE Uncharacterized protein
#=GS D7LXD5/353-420      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A0D3C2H9/117-192  AC A0A0D3C2H9
#=GS A0A0D3C2H9/117-192  OS Brassica oleracea var. oleracea
#=GS A0A0D3C2H9/117-192  DE Uncharacterized protein
#=GS A0A0D3C2H9/117-192  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS M4EZZ9/117-192      AC M4EZZ9
#=GS M4EZZ9/117-192      OS Brassica rapa subsp. pekinensis
#=GS M4EZZ9/117-192      DE Uncharacterized protein
#=GS M4EZZ9/117-192      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A078GVH7/117-192  AC A0A078GVH7
#=GS A0A078GVH7/117-192  OS Brassica napus
#=GS A0A078GVH7/117-192  DE BnaA04g16280D protein
#=GS A0A078GVH7/117-192  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A3P6CM34/117-192  AC A0A3P6CM34
#=GS A0A3P6CM34/117-192  OS Brassica rapa
#=GS A0A3P6CM34/117-192  DE Uncharacterized protein
#=GS A0A3P6CM34/117-192  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; 
#=GS A0A3P6CI17/116-191  AC A0A3P6CI17
#=GS A0A3P6CI17/116-191  OS Brassica oleracea
#=GS A0A3P6CI17/116-191  DE Uncharacterized protein
#=GS A0A3P6CI17/116-191  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS D7LIE6/118-193      AC D7LIE6
#=GS D7LIE6/118-193      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LIE6/118-193      DE Fe-deficiency induced transcription factor 1
#=GS D7LIE6/118-193      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS R0HDB5/120-195      AC R0HDB5
#=GS R0HDB5/120-195      OS Capsella rubella
#=GS R0HDB5/120-195      DE Uncharacterized protein
#=GS R0HDB5/120-195      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS M4D664/116-191      AC M4D664
#=GS M4D664/116-191      OS Brassica rapa subsp. pekinensis
#=GS M4D664/116-191      DE Uncharacterized protein
#=GS M4D664/116-191      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A0D3BU90/116-191  AC A0A0D3BU90
#=GS A0A0D3BU90/116-191  OS Brassica oleracea var. oleracea
#=GS A0A0D3BU90/116-191  DE Uncharacterized protein
#=GS A0A0D3BU90/116-191  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS R0F7Y5/51-129       AC R0F7Y5
#=GS R0F7Y5/51-129       OS Capsella rubella
#=GS R0F7Y5/51-129       DE Uncharacterized protein
#=GS R0F7Y5/51-129       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS A0A3P6CQL8/46-115   AC A0A3P6CQL8
#=GS A0A3P6CQL8/46-115   OS Brassica oleracea
#=GS A0A3P6CQL8/46-115   DE Uncharacterized protein
#=GS A0A3P6CQL8/46-115   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS A0A078HWP1/46-115   AC A0A078HWP1
#=GS A0A078HWP1/46-115   OS Brassica napus
#=GS A0A078HWP1/46-115   DE BnaC02g11780D protein
#=GS A0A078HWP1/46-115   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS M4CRJ0/46-115       AC M4CRJ0
#=GS M4CRJ0/46-115       OS Brassica rapa subsp. pekinensis
#=GS M4CRJ0/46-115       DE Uncharacterized protein
#=GS M4CRJ0/46-115       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A398A1N1/46-115   AC A0A398A1N1
#=GS A0A398A1N1/46-115   OS Brassica rapa
#=GS A0A398A1N1/46-115   DE Uncharacterized protein
#=GS A0A398A1N1/46-115   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; 
#=GF SQ 29
Q9FT81/353-420              K---DKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHH-------------------
Q0V7X4/118-193              NNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEAS--------------
Q700E3/51-129               ----------ASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDC-
F4KAJ5/48-117               ------AASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST--------------
C0SV65/118-193              NNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEAS--------------
A0A1P8AYH9/118-193          NNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEAS--------------
A0A1P8B6K8/51-128           ----------ASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPM-DYST-
A0A1P8B6L1/51-130           ----------ASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPFKQMDYS
Q2HIV9/48-117               ------AASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST--------------
A0A1P8BCX2/47-116           ------AASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST--------------
F4KAJ4/47-116               ------AASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST--------------
A0A3N6RR57/117-192          NNDGSRKTKTDRSRTLISERRRRSRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKADIAGLEAS--------------
V4LL51/116-191              NNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKADIAGLEAS--------------
R0HDZ8/354-419              -----KSLPREELNHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIEYVNHLRKRVHELETTHL-------------------
D7LXD5/353-420              K---DKRLPREELNHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELESTHH-------------------
A0A0D3C2H9/117-192          NNDGSRKTKTDRSRTLISERRRRSRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKADIAGLEAS--------------
M4EZZ9/117-192              NNDGSRKTKTDRSRTLISERRRRSRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKADIAGLEAS--------------
A0A078GVH7/117-192          NNDGSRKTKTDRSRTLISERRRRSRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKADIAGLEAS--------------
A0A3P6CM34/117-192          NNDGSRKTKTDRSRTLISERRRRSRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKADIAGLEAS--------------
A0A3P6CI17/116-191          NNDGNRKKKTDRSRTLISERKRRGRMKDKLYALRSLVPNITKMDKASIVGDAVAYVQELQSQAKKLKADIAGLEAS--------------
D7LIE6/118-193              NNDGSRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVSYVQELQSQAKKLKSDIAGLEAS--------------
R0HDB5/120-195              NNDGSRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEAS--------------
M4D664/116-191              NNDGSRKKKTDRSRTLISERKRRGRMKDKLYALRSLVPNITKMDKASIVGDAVAYVQELQSQAKKLKADIAGLEAS--------------
A0A0D3BU90/116-191          NNDGNRKKKTDRSRTLISERKRRGRMKDKLYALRSLVPNITKMDKASIVGDAVAYVQELQSQAKKLKADIAGLEAS--------------
R0F7Y5/51-129               ----------ASSKNVVSERNRRQKLNQRLFALRSVVPNITKLDKASVIKDSIDYMQELIEQEKRLEAEIRELESRSTLLENPIKDYDC-
A0A3P6CQL8/46-115           ------AASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIQGLQNEESKLEAKIRELEST--------------
A0A078HWP1/46-115           ------AASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIQGLQNEESKLEAKIRELEST--------------
M4CRJ0/46-115               ------AASSPASKNIVLERNRRQKLNQRLFALRAVVPNITKMDKASIIKDAISYIQGLQYEETKLEAEIRELEST--------------
A0A398A1N1/46-115           ------AASSPASKNIVLERNRRQKLNQRLFALRAVVPNITKMDKASIIKDAISYIQGLQYEETKLEAEIRELEST--------------
#=GC scorecons              111112323344755576995994766577679985996879799797659673966595364659665644664300000000000000
#=GC scorecons_70           ____________*___****_**_***_**_****_*************_*_*_***_*______***_*__**________________
#=GC scorecons_80           ________________*_**_**_*____*_****_**_*********__*_*_*___*______*________________________
#=GC scorecons_90           __________________**_**_________***_**___*_**_*___*___*___*______*________________________
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