# STOCKHOLM 1.0 #=GF ID 4.10.280.10/FF/000095 #=GF DE Basic helix-loop-helix family protein #=GF AC 4.10.280.10/FF/000095 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 73.202 #=GS Q1PF16/111-181 AC Q1PF16 #=GS Q1PF16/111-181 OS Arabidopsis thaliana #=GS Q1PF16/111-181 DE Transcription factor bHLH19 #=GS Q1PF16/111-181 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q1PF16/111-181 DR GO; GO:0003700; GO:0005515; GO:0006355; GO:0043565; #=GS Q1PF17/120-193 AC Q1PF17 #=GS Q1PF17/120-193 OS Arabidopsis thaliana #=GS Q1PF17/120-193 DE Transcription factor bHLH18 #=GS Q1PF17/120-193 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q1PF17/120-193 DR GO; GO:0003700; GO:0005515; GO:0006355; #=GS Q8S3F1/126-190 AC Q8S3F1 #=GS Q8S3F1/126-190 OS Arabidopsis thaliana #=GS Q8S3F1/126-190 DE Transcription factor NAI1 #=GS Q8S3F1/126-190 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q8S3F1/126-190 DR GO; GO:0003700; GO:0006355; GO:0007029; #=GS Q9T072/141-214 AC Q9T072 #=GS Q9T072/141-214 OS Arabidopsis thaliana #=GS Q9T072/141-214 DE Transcription factor bHLH25 #=GS Q9T072/141-214 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9T072/141-214 DR GO; GO:0003700; GO:0006355; #=GS A0A1P8B0N4/148-221 AC A0A1P8B0N4 #=GS A0A1P8B0N4/148-221 OS Arabidopsis thaliana #=GS A0A1P8B0N4/148-221 DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein #=GS A0A1P8B0N4/148-221 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A1P8B0Q3/148-221 AC A0A1P8B0Q3 #=GS A0A1P8B0Q3/148-221 OS Arabidopsis thaliana #=GS A0A1P8B0Q3/148-221 DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein #=GS A0A1P8B0Q3/148-221 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A1P8B0N9/144-217 AC A0A1P8B0N9 #=GS A0A1P8B0N9/144-217 OS Arabidopsis thaliana #=GS A0A1P8B0N9/144-217 DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein #=GS A0A1P8B0N9/144-217 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178UTY6/141-214 AC A0A178UTY6 #=GS A0A178UTY6/141-214 OS Arabidopsis thaliana #=GS A0A178UTY6/141-214 DE Uncharacterized protein #=GS A0A178UTY6/141-214 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS C0SV56/111-181 AC C0SV56 #=GS C0SV56/111-181 OS Arabidopsis thaliana #=GS C0SV56/111-181 DE Uncharacterized protein At2g22760 #=GS C0SV56/111-181 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A1P8AXG9/111-181 AC A0A1P8AXG9 #=GS A0A1P8AXG9/111-181 OS Arabidopsis thaliana #=GS A0A1P8AXG9/111-181 DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein #=GS A0A1P8AXG9/111-181 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178VWP9/126-190 AC A0A178VWP9 #=GS A0A178VWP9/126-190 OS Arabidopsis thaliana #=GS A0A178VWP9/126-190 DE NAI1 #=GS A0A178VWP9/126-190 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A0D3C1A6/140-215 AC A0A0D3C1A6 #=GS A0A0D3C1A6/140-215 OS Brassica oleracea var. oleracea #=GS A0A0D3C1A6/140-215 DE Uncharacterized protein #=GS A0A0D3C1A6/140-215 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS V4NIV1/116-188 AC V4NIV1 #=GS V4NIV1/116-188 OS Eutrema salsugineum #=GS V4NIV1/116-188 DE Uncharacterized protein #=GS V4NIV1/116-188 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A1J3E2V3/157-232 AC A0A1J3E2V3 #=GS A0A1J3E2V3/157-232 OS Noccaea caerulescens #=GS A0A1J3E2V3/157-232 DE Transcription factor bHLH18 #=GS A0A1J3E2V3/157-232 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS A0A087GSE3/128-192 AC A0A087GSE3 #=GS A0A087GSE3/128-192 OS Arabis alpina #=GS A0A087GSE3/128-192 DE Uncharacterized protein #=GS A0A087GSE3/128-192 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS R0F325/145-217 AC R0F325 #=GS R0F325/145-217 OS Capsella rubella #=GS R0F325/145-217 DE Uncharacterized protein #=GS R0F325/145-217 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A397ZU18/141-216 AC A0A397ZU18 #=GS A0A397ZU18/141-216 OS Brassica rapa #=GS A0A397ZU18/141-216 DE Uncharacterized protein #=GS A0A397ZU18/141-216 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS D7LE33/120-195 AC D7LE33 #=GS D7LE33/120-195 OS Arabidopsis lyrata subsp. lyrata #=GS D7LE33/120-195 DE Basic helix-loop-helix family protein #=GS D7LE33/120-195 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A078GM01/141-216 AC A0A078GM01 #=GS A0A078GM01/141-216 OS Brassica napus #=GS A0A078GM01/141-216 DE BnaA04g13200D protein #=GS A0A078GM01/141-216 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4EN40/141-216 AC M4EN40 #=GS M4EN40/141-216 OS Brassica rapa subsp. pekinensis #=GS M4EN40/141-216 DE Uncharacterized protein #=GS M4EN40/141-216 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A3P6FTB7/151-223 AC A0A3P6FTB7 #=GS A0A3P6FTB7/151-223 OS Brassica oleracea #=GS A0A3P6FTB7/151-223 DE Uncharacterized protein #=GS A0A3P6FTB7/151-223 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; #=GS A0A0D3A158/151-223 AC A0A0D3A158 #=GS A0A0D3A158/151-223 OS Brassica oleracea var. oleracea #=GS A0A0D3A158/151-223 DE Uncharacterized protein #=GS A0A0D3A158/151-223 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A398AI44/150-221 AC A0A398AI44 #=GS A0A398AI44/150-221 OS Brassica rapa #=GS A0A398AI44/150-221 DE Uncharacterized protein #=GS A0A398AI44/150-221 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS M4D5N3/150-221 AC M4D5N3 #=GS M4D5N3/150-221 OS Brassica rapa subsp. pekinensis #=GS M4D5N3/150-221 DE Uncharacterized protein #=GS M4D5N3/150-221 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A1J3CWY6/152-225 AC A0A1J3CWY6 #=GS A0A1J3CWY6/152-225 OS Noccaea caerulescens #=GS A0A1J3CWY6/152-225 DE Transcription factor bHLH25 #=GS A0A1J3CWY6/152-225 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS R0HWW4/116-186 AC R0HWW4 #=GS R0HWW4/116-186 OS Capsella rubella #=GS R0HWW4/116-186 DE Uncharacterized protein #=GS R0HWW4/116-186 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7LE34/101-170 AC D7LE34 #=GS D7LE34/101-170 OS Arabidopsis lyrata subsp. lyrata #=GS D7LE34/101-170 DE Basic helix-loop-helix family protein #=GS D7LE34/101-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS R0FWX6/135-198 AC R0FWX6 #=GS R0FWX6/135-198 OS Capsella rubella #=GS R0FWX6/135-198 DE Uncharacterized protein #=GS R0FWX6/135-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7LE35/127-190 AC D7LE35 #=GS D7LE35/127-190 OS Arabidopsis lyrata subsp. lyrata #=GS D7LE35/127-190 DE Uncharacterized protein #=GS D7LE35/127-190 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GF SQ 29 Q1PF16/111-181 ---TRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM---------- Q1PF17/120-193 -----SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLV----- Q8S3F1/126-190 -----EPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV-------------- Q9T072/141-214 QPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLE---------- A0A1P8B0N4/148-221 -----SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLV----- A0A1P8B0Q3/148-221 -----SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLV----- A0A1P8B0N9/144-217 -----SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLV----- A0A178UTY6/141-214 QPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLE---------- C0SV56/111-181 ---TRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM---------- A0A1P8AXG9/111-181 ---TRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM---------- A0A178VWP9/126-190 -----EPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV-------------- A0A0D3C1A6/140-215 -----SHSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKERTMESMVLVKK--- V4NIV1/116-188 -------SNSQDHILAERKRREKLSQRFVALSALIPGLKKMDKASVLGDAIKHIKNLQESVKEFEEQKKERTMESMVLVK---- A0A1J3E2V3/157-232 -----SQSNAQDHILAERKRREKLTERFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKERTMESMVLVKK--- A0A087GSE3/128-192 ----REPHLMKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATILEDAIKHLKQLQERVKKLDEERV--------------- R0F325/145-217 -PLPRSQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQEKVGELEEQKKERRLE---------- A0A397ZU18/141-216 -----SQSNAQDHILAERKRREKLTQRFVALSAQIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKERTMESMVLVKK--- D7LE33/120-195 -----SQSNAQDHILAERKRREKLTQRFVALSALVPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTM---VVVKKSQL A0A078GM01/141-216 -----SQSNAQDHILAERKRREKLTQRFVALSAQIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKERTMESMVLVKK--- M4EN40/141-216 -----SQSNAQDHILAERKRREKLTQRFVALSAQIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKERTMESMVLVKK--- A0A3P6FTB7/151-223 -PLYRNQTNAQDHIMAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKREKRLE---------- A0A0D3A158/151-223 -PLYRNQTNAQDHIMAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKREKRLE---------- A0A398AI44/150-221 --LCRNQTNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEFEEQKRERRLE---------- M4D5N3/150-221 --LCRNQTNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEFEEQKRERRLE---------- A0A1J3CWY6/152-225 QPLARSQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEFEEQKKERRLE---------- R0HWW4/116-186 ---TRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTVLDDAISRMKQLQEQIRKLKEEKEAKREM---------- D7LE34/101-170 ---TRSPVLAKEHVLAERNRREKLSQKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRKLKEEKEATRE----------- R0FWX6/135-198 -------HLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQEKVKKLEEERVGT------------- D7LE35/127-190 -----EPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERV--------------- #=GC scorecons 000024445667977999899799567779999759999959976795997676959994755569674433230000000000 #=GC scorecons_70 _________***************_*********_*****_***_**_*******_***_*___****________________ #=GC scorecons_80 ____________*__*********__**_*****_*****_**__**_**__*_*_***_*____*_*________________ #=GC scorecons_90 ____________*__******_**_____****__*****_**___*_**____*_***______*__________________ //