# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/000093
#=GF DE BHLH domain class transcription factor
#=GF AC 4.10.280.10/FF/000093
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.049
#=GS F4K9L3/278-351      AC F4K9L3
#=GS F4K9L3/278-351      OS Arabidopsis thaliana
#=GS F4K9L3/278-351      DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS F4K9L3/278-351      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4K9L3/278-351      DR GO; GO:0003677; GO:0003700; GO:0005515; GO:0005634; GO:0006351; GO:0006355; GO:0009742; GO:1902448; 
#=GS Q9FMB6/29-106       AC Q9FMB6
#=GS Q9FMB6/29-106       OS Arabidopsis thaliana
#=GS Q9FMB6/29-106       DE Transcription factor BIM3
#=GS Q9FMB6/29-106       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FMB6/29-106       DR GO; GO:0003700; GO:0005515; GO:0006351; GO:0006355; 
#=GS Q9CAA4/43-115       AC Q9CAA4
#=GS Q9CAA4/43-115       OS Arabidopsis thaliana
#=GS Q9CAA4/43-115       DE Transcription factor BIM2
#=GS Q9CAA4/43-115       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9CAA4/43-115       DR GO; GO:0003700; GO:0005515; GO:0006351; GO:0043565; 
#=GS Q9LEZ3/274-347      AC Q9LEZ3
#=GS Q9LEZ3/274-347      OS Arabidopsis thaliana
#=GS Q9LEZ3/274-347      DE Transcription factor BIM1
#=GS Q9LEZ3/274-347      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9LEZ3/274-347      DR GO; GO:0005515; 
#=GS A0A1P8BB12/29-106   AC A0A1P8BB12
#=GS A0A1P8BB12/29-106   OS Arabidopsis thaliana
#=GS A0A1P8BB12/29-106   DE BES1-interacting Myc-like protein 3
#=GS A0A1P8BB12/29-106   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4K9L4/154-227      AC F4K9L4
#=GS F4K9L4/154-227      OS Arabidopsis thaliana
#=GS F4K9L4/154-227      DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS F4K9L4/154-227      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8BBP3/278-351  AC A0A1P8BBP3
#=GS A0A1P8BBP3/278-351  OS Arabidopsis thaliana
#=GS A0A1P8BBP3/278-351  DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS A0A1P8BBP3/278-351  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4K9L2/274-347      AC F4K9L2
#=GS F4K9L2/274-347      OS Arabidopsis thaliana
#=GS F4K9L2/274-347      DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS F4K9L2/274-347      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8BBN4/274-347  AC A0A1P8BBN4
#=GS A0A1P8BBN4/274-347  OS Arabidopsis thaliana
#=GS A0A1P8BBN4/274-347  DE Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
#=GS A0A1P8BBN4/274-347  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS C0SVN9/154-227      AC C0SVN9
#=GS C0SVN9/154-227      OS Arabidopsis thaliana
#=GS C0SVN9/154-227      DE Uncharacterized protein At5g08130
#=GS C0SVN9/154-227      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS M5XCV5/41-111       AC M5XCV5
#=GS M5XCV5/41-111       OS Prunus persica
#=GS M5XCV5/41-111       DE Uncharacterized protein
#=GS M5XCV5/41-111       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus; Prunus persica; 
#=GS A0A0L9UTD6/42-111   AC A0A0L9UTD6
#=GS A0A0L9UTD6/42-111   OS Vigna angularis
#=GS A0A0L9UTD6/42-111   DE Uncharacterized protein
#=GS A0A0L9UTD6/42-111   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; 
#=GS V4NL63/33-108       AC V4NL63
#=GS V4NL63/33-108       OS Eutrema salsugineum
#=GS V4NL63/33-108       DE Uncharacterized protein
#=GS V4NL63/33-108       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A078I7H6/40-112   AC A0A078I7H6
#=GS A0A078I7H6/40-112   OS Brassica napus
#=GS A0A078I7H6/40-112   DE BnaA02g14220D protein
#=GS A0A078I7H6/40-112   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A087HGS6/40-112   AC A0A087HGS6
#=GS A0A087HGS6/40-112   OS Arabis alpina
#=GS A0A087HGS6/40-112   DE Uncharacterized protein
#=GS A0A087HGS6/40-112   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A1J3CM67/44-116   AC A0A1J3CM67
#=GS A0A1J3CM67/44-116   OS Noccaea caerulescens
#=GS A0A1J3CM67/44-116   DE Transcription factor BIM2
#=GS A0A1J3CM67/44-116   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0I005/47-119       AC R0I005
#=GS R0I005/47-119       OS Capsella rubella
#=GS R0I005/47-119       DE Uncharacterized protein
#=GS R0I005/47-119       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D9ZIP3/41-111       AC D9ZIP3
#=GS D9ZIP3/41-111       OS Malus domestica
#=GS D9ZIP3/41-111       DE BHLH domain class transcription factor
#=GS D9ZIP3/41-111       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus; Malus domestica; 
#=GS D7MJT9/29-104       AC D7MJT9
#=GS D7MJT9/29-104       OS Arabidopsis lyrata subsp. lyrata
#=GS D7MJT9/29-104       DE Uncharacterized protein
#=GS D7MJT9/29-104       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS M4FB66/39-111       AC M4FB66
#=GS M4FB66/39-111       OS Brassica rapa subsp. pekinensis
#=GS M4FB66/39-111       DE Uncharacterized protein
#=GS M4FB66/39-111       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS E4MVZ2/44-116       AC E4MVZ2
#=GS E4MVZ2/44-116       OS Eutrema halophilum
#=GS E4MVZ2/44-116       DE mRNA, clone: RTFL01-03-H22
#=GS E4MVZ2/44-116       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema halophilum; 
#=GS A0A0D3CZ53/76-148   AC A0A0D3CZ53
#=GS A0A0D3CZ53/76-148   OS Brassica oleracea var. oleracea
#=GS A0A0D3CZ53/76-148   DE Uncharacterized protein
#=GS A0A0D3CZ53/76-148   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A1S3VZT6/43-112   AC A0A1S3VZT6
#=GS A0A1S3VZT6/43-112   OS Vigna radiata var. radiata
#=GS A0A1S3VZT6/43-112   DE transcription factor BIM2 isoform X1
#=GS A0A1S3VZT6/43-112   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS V4KEV1/45-117       AC V4KEV1
#=GS V4KEV1/45-117       OS Eutrema salsugineum
#=GS V4KEV1/45-117       DE Uncharacterized protein
#=GS V4KEV1/45-117       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS V4MAX5/44-116       AC V4MAX5
#=GS V4MAX5/44-116       OS Eutrema salsugineum
#=GS V4MAX5/44-116       DE Uncharacterized protein
#=GS V4MAX5/44-116       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A0D3AP56/39-111   AC A0A0D3AP56
#=GS A0A0D3AP56/39-111   OS Brassica oleracea var. oleracea
#=GS A0A0D3AP56/39-111   DE Uncharacterized protein
#=GS A0A0D3AP56/39-111   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A078H6T1/46-118   AC A0A078H6T1
#=GS A0A078H6T1/46-118   OS Brassica napus
#=GS A0A078H6T1/46-118   DE BnaC06g29910D protein
#=GS A0A078H6T1/46-118   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A1S3VYZ3/42-111   AC A0A1S3VYZ3
#=GS A0A1S3VYZ3/42-111   OS Vigna radiata var. radiata
#=GS A0A1S3VYZ3/42-111   DE transcription factor BIM2 isoform X2
#=GS A0A1S3VYZ3/42-111   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS D7KWX4/43-115       AC D7KWX4
#=GS D7KWX4/43-115       OS Arabidopsis lyrata subsp. lyrata
#=GS D7KWX4/43-115       DE Uncharacterized protein
#=GS D7KWX4/43-115       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS M4CJH1/74-143       AC M4CJH1
#=GS M4CJH1/74-143       OS Brassica rapa subsp. pekinensis
#=GS M4CJH1/74-143       DE Uncharacterized protein
#=GS M4CJH1/74-143       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GF SQ 30
F4K9L3/278-351              --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
Q9FMB6/29-106               RNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEDS-HQMWYQSPTKL
Q9CAA4/43-115               --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
Q9LEZ3/274-347              --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
A0A1P8BB12/29-106           RNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEDS-HQMWYQSPTKL
F4K9L4/154-227              --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
A0A1P8BBP3/278-351          --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
F4K9L2/274-347              --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
A0A1P8BBN4/274-347          --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
C0SVN9/154-227              --LNTPRSKHSATEQRRRSKINDRFQMLRQLIP--NSDQKRDKASFLLEVIEYIQFLQEKADKYVTS-YQGWNHEPAKL
M5XCV5/41-111               --ASAIRSKHSVTEQRRRSKINERFQILRDLIP--HSDQKRDTASFLLEVIEYVQYLQEKVHKYEGS-YQGWSPEP---
A0A0L9UTD6/42-111           --ASAIRSKHSVTEQRRRSKINERFQILRDLIP--HSDQKRDTASFLLEVIEYVQYLQEKVQKYEGS-YPGWGQE----
V4NL63/33-108               RNRSSLRSKHSETEQRRRSKINERFQSLMDIIP--QNDQKRDKASFLLEVIEYIQFLQEKVQMYEGS-HQMWYQAPTKL
A0A078I7H6/40-112           --ASAVRSKHSVTEQRRRSKINERFQVLRELIP--NSEQKRDTASFLLEVIGYVQYLQEKVQKYEGS-YPGWSQEPTK-
A0A087HGS6/40-112           --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWTQEPTK-
A0A1J3CM67/44-116           --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQERVQKYEGS-YPGWSQEPTK-
R0I005/47-119               --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
D9ZIP3/41-111               --ASAIRSKHSVTEQRRRSKINERFQILRDLIP--HSDQKRDTASFLLEVIEYVQYLQEKVHKYEGS-YQGWSPEP---
D7MJT9/29-104               RNRSSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEGSDHQMWDQGP---
M4FB66/39-111               --ASAVRSKHSVTEQRRRSKINERFQVLRELIP--NSEQKRDTASFLLEVIGYVQYLQEKVQKYEGS-YPGWSQEPTK-
E4MVZ2/44-116               --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
A0A0D3CZ53/76-148           --ASAIRSKHSVTEQRRRSKINERFQILREIIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
A0A1S3VZT6/43-112           --ASAIRSKHSVTEQRRRSKINERFQILRDLIP--HSDQKRDTASFLLEVIEYVQYLQEKVQKYEGS-YPGWGQE----
V4KEV1/45-117               --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
V4MAX5/44-116               --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
A0A0D3AP56/39-111           --ASAVRSKHSLTEQRRRSKINERFQVLRELIP--NSEQKRDTASFLLEVIGYVQYLQEKVQKYEGS-YPGWSQEPTK-
A0A078H6T1/46-118           --ASAIRSKHSVTEQRRRSKINERFQILREIIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
A0A1S3VYZ3/42-111           --ASAIRSKHSVTEQRRRSKINERFQILRDLIP--HSDQKRDTASFLLEVIEYVQYLQEKVQKYEGS-YPGWGQE----
D7KWX4/43-115               --ASAIRSKHSVTEQRRRSKINERFQILRELIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWSQEPTK-
M4CJH1/74-143               --ASAIRSKHSVTEQRRRSKINERFQILREIIP--NSEQKRDTASFLLEVIDYVQYLQEKVQKYEGS-YPGWGQE----
#=GC scorecons              0046549999949999999999799959656990057799995999999996977799986569659075694666351
#=GC scorecons_70           ___*__*****_**************_**_***___******_******************_**__*_*__*_***___
#=GC scorecons_80           ______*****_**************_*___**____*****_********_*_******___*__*_*__*_______
#=GC scorecons_90           ______*****_**********_***_*___**_____****_********_*___****___*__*____*_______
//