# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/000132
#=GF DE CRE-HLH-2 protein
#=GF AC 4.10.280.10/FF/000132
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 61.703
#=GS G5EEG9/290-370      AC G5EEG9
#=GS G5EEG9/290-370      OS Caenorhabditis elegans
#=GS G5EEG9/290-370      DE Helix Loop Helix
#=GS G5EEG9/290-370      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EEG9/290-370      DR GO; GO:0000003; GO:0000977; GO:0000981; GO:0001708; GO:0002119; GO:0005634; GO:0005737; GO:0006366; GO:0008406; GO:0009792; GO:0010171; GO:0014018; GO:0035262; GO:0040025; GO:0042803; GO:0043068; GO:0043425; GO:0043565; GO:0045138; GO:0045944; GO:0046982; GO:0048666; GO:0090575; 
#=GS H3DW54/220-303      AC H3DW54
#=GS H3DW54/220-303      OS Pristionchus pacificus
#=GS H3DW54/220-303      DE Uncharacterized protein
#=GS H3DW54/220-303      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A8Y164/318-403      AC A8Y164
#=GS A8Y164/318-403      OS Caenorhabditis briggsae
#=GS A8Y164/318-403      DE Protein CBR-HLH-2
#=GS A8Y164/318-403      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5VH26/307-389  AC A0A2G5VH26
#=GS A0A2G5VH26/307-389  OS Caenorhabditis nigoni
#=GS A0A2G5VH26/307-389  DE Uncharacterized protein
#=GS A0A2G5VH26/307-389  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261BVL3/286-368  AC A0A261BVL3
#=GS A0A261BVL3/286-368  OS Caenorhabditis latens
#=GS A0A261BVL3/286-368  DE Uncharacterized protein
#=GS A0A261BVL3/286-368  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS G0P4R9/297-377      AC G0P4R9
#=GS G0P4R9/297-377      OS Caenorhabditis brenneri
#=GS G0P4R9/297-377      DE Uncharacterized protein
#=GS G0P4R9/297-377      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3NH49/286-368      AC E3NH49
#=GS E3NH49/286-368      OS Caenorhabditis remanei
#=GS E3NH49/286-368      DE CRE-HLH-2 protein
#=GS E3NH49/286-368      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A2H2I9F7/290-372  AC A0A2H2I9F7
#=GS A0A2H2I9F7/290-372  OS Caenorhabditis japonica
#=GS A0A2H2I9F7/290-372  DE Uncharacterized protein
#=GS A0A2H2I9F7/290-372  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A454XS22/220-303  AC A0A454XS22
#=GS A0A454XS22/220-303  OS Pristionchus pacificus
#=GS A0A454XS22/220-303  DE Hlh-2
#=GS A0A454XS22/220-303  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS H3FR70/52-143       AC H3FR70
#=GS H3FR70/52-143       OS Pristionchus pacificus
#=GS H3FR70/52-143       DE Uncharacterized protein
#=GS H3FR70/52-143       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS G0PI19/297-377      AC G0PI19
#=GS G0PI19/297-377      OS Caenorhabditis brenneri
#=GS G0PI19/297-377      DE Uncharacterized protein
#=GS G0PI19/297-377      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GF SQ 11
G5EEG9/290-370              -SDNESMS-DDKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVSVITQLEEQVRQ-------RNMNPKVM
H3DW54/220-303              -EDFDE-NEGEDDHDRRKLNNIRERVRVKDINNAFHELGHMVNQFDN-------AGVTMEKQQTKLGILHNAVELIKNLEEQVKR-------RNLARNMA
A8Y164/318-403              LSDNESVSNDEKDTDRRSQNNARERIRVKDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVAVITQLEEQVREFGSPKGVRNLK----
A0A2G5VH26/307-389          LSDNESVSNDEKDTDRRSQNNARERIRVKDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVAVITQLEEQVRQ-------RNMNPKAM
A0A261BVL3/286-368          LSDNESVSNDEKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVAVITQLEEQVRQ-------RNMNPKAM
G0P4R9/297-377              -SDNESVS-DEKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVSVITQLEEQVRQ-------RNMNPKAM
E3NH49/286-368              LSDNESVSNDEKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVAVITQLEEQVRQ-------RNMNPKAM
A0A2H2I9F7/290-372          LSDNESVSNDEKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNPTT----------ERNQTKLGILHTAVSVITALEEQVRQ-------RNMNPKAM
A0A454XS22/220-303          -EDFDE-NEGEDDHDRRKLNNIRERVRVKDINNAFHELGHMVNQFDN-------AGVTMEKQQTKLGILHNAVELIKNLEEQVKR-------RNLARNMA
H3FR70/52-143               -GDSDGEGGSDKEVVRRDQNNARERIRVRDINQAFKELGKMCYQLQHSSMGGANGGAGGDKAQTKLGILHQAVEVIQKLEEQVRQ-------RNLNPKSA
G0PI19/297-377              -SDNESVS-DEKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNQNT----------ERNQTKLGILHNAVSVITQLEEQVRQ-------RNMNPKAM
#=GC scorecons              1594752535767469945996999799699959969996954945423000000100077599999999699469449999975000000099654434
#=GC scorecons_70           __*_*_____*_*_***__**_**********_******_*__*_______________**_***********_**__******________***_____
#=GC scorecons_80           __*_______*_*__**__**_******_***_**_***_*__*_______________*__********_**__*__******________**______
#=GC scorecons_90           __*____________**__**_***_**_***_**_***_*__*__________________********_**__*__*****_________**______
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