# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/000127
#=GF DE Helix-loop-helix protein 11
#=GF AC 4.10.280.10/FF/000127
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 60.617
#=GS P34474/104-165      AC P34474
#=GS P34474/104-165      OS Caenorhabditis elegans
#=GS P34474/104-165      DE Helix-loop-helix protein 11
#=GS P34474/104-165      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS T1FAU4/12-96        AC T1FAU4
#=GS T1FAU4/12-96        OS Helobdella robusta
#=GS T1FAU4/12-96        DE Uncharacterized protein
#=GS T1FAU4/12-96        DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS H3EXI5/28-97        AC H3EXI5
#=GS H3EXI5/28-97        OS Pristionchus pacificus
#=GS H3EXI5/28-97        DE Uncharacterized protein
#=GS H3EXI5/28-97        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2H2I7Q2/103-165  AC A0A2H2I7Q2
#=GS A0A2H2I7Q2/103-165  OS Caenorhabditis japonica
#=GS A0A2H2I7Q2/103-165  DE Uncharacterized protein
#=GS A0A2H2I7Q2/103-165  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A8XA81/162-222      AC A8XA81
#=GS A8XA81/162-222      OS Caenorhabditis briggsae
#=GS A8XA81/162-222      DE Protein CBR-HLH-11
#=GS A8XA81/162-222      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS G0MK76/104-166      AC G0MK76
#=GS G0MK76/104-166      OS Caenorhabditis brenneri
#=GS G0MK76/104-166      DE CBN-HLH-11 protein
#=GS G0MK76/104-166      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3LSB0/104-165      AC E3LSB0
#=GS E3LSB0/104-165      OS Caenorhabditis remanei
#=GS E3LSB0/104-165      DE CRE-HLH-11 protein
#=GS E3LSB0/104-165      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A260ZZB1/104-163  AC A0A260ZZB1
#=GS A0A260ZZB1/104-163  OS Caenorhabditis latens
#=GS A0A260ZZB1/104-163  DE Uncharacterized protein
#=GS A0A260ZZB1/104-163  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5UH93/104-166  AC A0A2G5UH93
#=GS A0A2G5UH93/104-166  OS Caenorhabditis nigoni
#=GS A0A2G5UH93/104-166  DE Uncharacterized protein
#=GS A0A2G5UH93/104-166  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A1I7UQJ4/95-157   AC A0A1I7UQJ4
#=GS A0A1I7UQJ4/95-157   OS Caenorhabditis tropicalis
#=GS A0A1I7UQJ4/95-157   DE Uncharacterized protein
#=GS A0A1I7UQJ4/95-157   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A2A6CI69/80-149   AC A0A2A6CI69
#=GS A0A2A6CI69/80-149   OS Pristionchus pacificus
#=GS A0A2A6CI69/80-149   DE HLH domain containing protein
#=GS A0A2A6CI69/80-149   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 11
P34474/104-165              -LDPDRRSRMRRQIANCNERRRMQSINAGFLALRALLPRKEGEKLSKAAILQQTADMVHQLLG------------------------
T1FAU4/12-96                SLERDK--KTRREIANSNERRRMQSINSGFQQLKALLPDTEDDKRSKSVILHQAVEHIAKLESEKAHLLNQNSKLMCLVQQEMDGRM
H3EXI5/28-97                ---------IRRQIANCNERRRMQSINAGFQSLRALLPRKEGEKLSKAAILQQTAELIQQLRAERSRFLERTGS------SEEDT--
A0A2H2I7Q2/103-165          -VDPDRRSRMRRQIANCNERRRMQSINAGFMSLRALLPRKEGEKLSKAAILQQTAEMVHQLLGQ-----------------------
A8XA81/162-222              -LDPDR--RMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTADMVHHLMGQ-----------------------
G0MK76/104-166              -LDPDRRSKMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTADMVHQLLGQ-----------------------
E3LSB0/104-165              -LDPDRRSRMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTAEMVHQLLG------------------------
A0A260ZZB1/104-163          -LDPDR--RMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTAEMVHQLLG------------------------
A0A2G5UH93/104-166          -LDPDRRSRMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTADMVHHLMGQ-----------------------
A0A1I7UQJ4/95-157           -LDPDRRSRMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTADMVHQLLLQ-----------------------
A0A2A6CI69/80-149           ---------IRRQIANCNERRRMQSINAGFQSLRALLPRKEGEKLSKAAILQQTAELIQQLRAERSRFLERTGS------SEEDT--
#=GC scorecons              043243113599799979999999999799449799996697796997799797774656934310001000000000000101000
#=GC scorecons_70           __________********************__************_***********_*_**__________________________
#=GC scorecons_80           __________******_**********_**__******__*_**_**__*****_*____*__________________________
#=GC scorecons_90           __________**_***_**********_**__*_****__*__*_**__**_*_______*__________________________
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