# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/000107
#=GF DE Basic helix-loop-helix transcription factor
#=GF AC 4.10.280.10/FF/000107
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 38.314
#=GS P13098/4-67       AC P13098
#=GS P13098/4-67       OS Drosophila melanogaster
#=GS P13098/4-67       DE Enhancer of split m8 protein
#=GS P13098/4-67       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS P13098/4-67       DR GO; GO:0001227; GO:0005515; GO:0007498; GO:0010629; GO:0016360; GO:0042803; GO:0043565; GO:0046982; GO:0048749; GO:0048813; 
#=GS P13096/12-75      AC P13096
#=GS P13096/12-75      OS Drosophila melanogaster
#=GS P13096/12-75      DE Enhancer of split m5 protein
#=GS P13096/12-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS P13096/12-75      DR GO; GO:0001227; GO:0005515; GO:0005634; GO:0042803; GO:0043565; GO:0046982; 
#=GS B4LYS2/10-72      AC B4LYS2
#=GS B4LYS2/10-72      OS Drosophila virilis
#=GS B4LYS2/10-72      DE Uncharacterized protein
#=GS B4LYS2/10-72      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A0M4EF44/10-72  AC A0A0M4EF44
#=GS A0A0M4EF44/10-72  OS Drosophila busckii
#=GS A0A0M4EF44/10-72  DE E-spl
#=GS A0A0M4EF44/10-72  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B4JGI9/10-72      AC B4JGI9
#=GS B4JGI9/10-72      OS Drosophila grimshawi
#=GS B4JGI9/10-72      DE GH18145
#=GS B4JGI9/10-72      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS A0A1W4VJX6/4-69   AC A0A1W4VJX6
#=GS A0A1W4VJX6/4-69   OS Drosophila ficusphila
#=GS A0A1W4VJX6/4-69   DE enhancer of split m8 protein
#=GS A0A1W4VJX6/4-69   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS Q5S414/4-67       AC Q5S414
#=GS Q5S414/4-67       OS Drosophila simulans
#=GS Q5S414/4-67       DE Basic helix-loop-helix transcription factor
#=GS Q5S414/4-67       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS Q296Z1/4-68       AC Q296Z1
#=GS Q296Z1/4-68       OS Drosophila pseudoobscura pseudoobscura
#=GS Q296Z1/4-68       DE Uncharacterized protein
#=GS Q296Z1/4-68       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4ICI4/4-67       AC B4ICI4
#=GS B4ICI4/4-67       OS Drosophila sechellia
#=GS B4ICI4/4-67       DE GM10301
#=GS B4ICI4/4-67       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3P6A7/4-68       AC B3P6A7
#=GS B3P6A7/4-68       OS Drosophila erecta
#=GS B3P6A7/4-68       DE GG11459
#=GS B3P6A7/4-68       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PSX3/4-68       AC B4PSX3
#=GS B4PSX3/4-68       OS Drosophila yakuba
#=GS B4PSX3/4-68       DE Uncharacterized protein
#=GS B4PSX3/4-68       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A1W4V7R1/12-75  AC A0A1W4V7R1
#=GS A0A1W4V7R1/12-75  OS Drosophila ficusphila
#=GS A0A1W4V7R1/12-75  DE enhancer of split m5 protein
#=GS A0A1W4V7R1/12-75  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4QW15/12-75      AC B4QW15
#=GS B4QW15/12-75      OS Drosophila simulans
#=GS B4QW15/12-75      DE HLHm5
#=GS B4QW15/12-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A3B0KSB1/12-76  AC A0A3B0KSB1
#=GS A0A3B0KSB1/12-76  OS Drosophila guanche
#=GS A0A3B0KSB1/12-76  DE Blast:Enhancer of split m5 protein
#=GS A0A3B0KSB1/12-76  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4NK32/12-74      AC B4NK32
#=GS B4NK32/12-74      OS Drosophila willistoni
#=GS B4NK32/12-74      DE Uncharacterized protein
#=GS B4NK32/12-74      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B3LY36/13-75      AC B3LY36
#=GS B3LY36/13-75      OS Drosophila ananassae
#=GS B3LY36/13-75      DE Uncharacterized protein
#=GS B3LY36/13-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4GEG5/13-75      AC B4GEG5
#=GS B4GEG5/13-75      OS Drosophila persimilis
#=GS B4GEG5/13-75      DE GL22018
#=GS B4GEG5/13-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B4ICI1/12-75      AC B4ICI1
#=GS B4ICI1/12-75      OS Drosophila sechellia
#=GS B4ICI1/12-75      DE GM10203
#=GS B4ICI1/12-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4K6D0/10-72      AC B4K6D0
#=GS B4K6D0/10-72      OS Drosophila mojavensis
#=GS B4K6D0/10-72      DE Uncharacterized protein
#=GS B4K6D0/10-72      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS Q296Y8/13-75      AC Q296Y8
#=GS Q296Y8/13-75      OS Drosophila pseudoobscura pseudoobscura
#=GS Q296Y8/13-75      DE Uncharacterized protein
#=GS Q296Y8/13-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B3P6B1/12-75      AC B3P6B1
#=GS B3P6B1/12-75      OS Drosophila erecta
#=GS B3P6B1/12-75      DE GG12204
#=GS B3P6B1/12-75      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PSX6/13-76      AC B4PSX6
#=GS B4PSX6/13-76      OS Drosophila yakuba
#=GS B4PSX6/13-76      DE Uncharacterized protein
#=GS B4PSX6/13-76      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 22
P13098/4-67               TTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESAVIFMRQQKT--
P13096/12-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKQVV--
B4LYS2/10-72              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQL---
A0A0M4EF44/10-72          VSKTQHYLKVKKPLLERQRRARMNSCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQL---
B4JGI9/10-72              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEASLLFMRKQL---
A0A1W4VJX6/4-69           TTKTQIYQKVKKPLLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESAVVFMRQQKTQK
Q5S414/4-67               TTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESAVIFMRQQKT--
Q296Z1/4-68               TTKTQIYQKVKKPLLERQRRARINKCLDTLKTLVAELRGDDGILRMDKAEMLESAVIFMRQQKSN-
B4ICI4/4-67               TTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESAVIFMRQQKT--
B3P6A7/4-68               TTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESAVIFMRQQKTT-
B4PSX3/4-68               TTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESAVIFMRQQKTT-
A0A1W4V7R1/12-75          VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKQVV--
B4QW15/12-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKQVV--
A0A3B0KSB1/12-76          VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQVVQ-
B4NK32/12-74              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQV---
B3LY36/13-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKEV---
B4GEG5/13-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQV---
B4ICI1/12-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQADDAILRMDKAEMLEAALVFMRKQVV--
B4K6D0/10-72              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQL---
Q296Y8/13-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRLDKAEMLEAALVFMRKQV---
B3P6B1/12-75              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKQVV--
B4PSX6/13-76              VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKQVV--
#=GC scorecons            569994959999979999999989899969999999668996999799999996866999684200
#=GC scorecons_70         __***_*_*********************************_***********_********____
#=GC scorecons_80         __***_*_*****_**************_*******__***_***_*******_*__***_*____
#=GC scorecons_90         __***_*_*****_**************_*******__***_***_*******_*__***_*____
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