# STOCKHOLM 1.0
#=GF ID 4.10.240.10/FF/000027
#=GF DE Specific RNA polymerase II transcription factor
#=GF AC 4.10.240.10/FF/000027
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 74.040
#=GS A0A1D8PCY0/40-117  AC A0A1D8PCY0
#=GS A0A1D8PCY0/40-117  OS Candida albicans SC5314
#=GS A0A1D8PCY0/40-117  DE Aro80p
#=GS A0A1D8PCY0/40-117  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS E6RAU5/61-125      AC E6RAU5
#=GS E6RAU5/61-125      OS Cryptococcus gattii WM276
#=GS E6RAU5/61-125      DE Uncharacterized protein
#=GS E6RAU5/61-125      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A1D8NBP8/68-132  AC A0A1D8NBP8
#=GS A0A1D8NBP8/68-132  OS Yarrowia lipolytica
#=GS A0A1D8NBP8/68-132  DE Uncharacterized protein
#=GS A0A1D8NBP8/68-132  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS B9W7A1/40-117      AC B9W7A1
#=GS B9W7A1/40-117      OS Candida dubliniensis CD36
#=GS B9W7A1/40-117      DE Zinc-finger transcriptional activator, putative
#=GS B9W7A1/40-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS Q5KBM6/89-155      AC Q5KBM6
#=GS Q5KBM6/89-155      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KBM6/89-155      DE Uncharacterized protein
#=GS Q5KBM6/89-155      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0D0VLR7/61-125  AC A0A0D0VLR7
#=GS A0A0D0VLR7/61-125  OS Cryptococcus gattii CA1280
#=GS A0A0D0VLR7/61-125  DE Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence
#=GS A0A0D0VLR7/61-125  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS A0A0D0YZT9/61-125  AC A0A0D0YZT9
#=GS A0A0D0YZT9/61-125  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0YZT9/61-125  DE Unplaced genomic scaffold supercont2.3, whole genome shotgun sequence
#=GS A0A0D0YZT9/61-125  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS J9VUI7/91-156      AC J9VUI7
#=GS J9VUI7/91-156      OS Cryptococcus neoformans var. grubii H99
#=GS J9VUI7/91-156      DE Specific RNA polymerase II transcription factor
#=GS J9VUI7/91-156      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS C4YEV6/40-117      AC C4YEV6
#=GS C4YEV6/40-117      OS Candida albicans WO-1
#=GS C4YEV6/40-117      DE Uncharacterized protein
#=GS C4YEV6/40-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q6CBH8/68-132      AC Q6CBH8
#=GS Q6CBH8/68-132      OS Yarrowia lipolytica CLIB122
#=GS Q6CBH8/68-132      DE YALI0C18645p
#=GS Q6CBH8/68-132      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS A0A0D0YEZ9/61-125  AC A0A0D0YEZ9
#=GS A0A0D0YEZ9/61-125  OS Cryptococcus gattii EJB2
#=GS A0A0D0YEZ9/61-125  DE Unplaced genomic scaffold supercont1.57, whole genome shotgun sequence
#=GS A0A0D0YEZ9/61-125  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A226BCE7/91-156  AC A0A226BCE7
#=GS A0A226BCE7/91-156  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BCE7/91-156  DE Specific RNA polymerase II transcription factor
#=GS A0A226BCE7/91-156  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A225Y1F0/91-156  AC A0A225Y1F0
#=GS A0A225Y1F0/91-156  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225Y1F0/91-156  DE Specific RNA polymerase II transcription factor
#=GS A0A225Y1F0/91-156  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS Q55N94/89-155      AC Q55N94
#=GS Q55N94/89-155      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q55N94/89-155      DE Uncharacterized protein
#=GS Q55N94/89-155      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS Q5KBT2/15-80       AC Q5KBT2
#=GS Q5KBT2/15-80       OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KBT2/15-80       DE Specific RNA polymerase II transcription factor, putative
#=GS Q5KBT2/15-80       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS F5HDX4/15-80       AC F5HDX4
#=GS F5HDX4/15-80       OS Cryptococcus neoformans var. neoformans B-3501A
#=GS F5HDX4/15-80       DE Uncharacterized protein
#=GS F5HDX4/15-80       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS J9VWX8/15-80       AC J9VWX8
#=GS J9VWX8/15-80       OS Cryptococcus neoformans var. grubii H99
#=GS J9VWX8/15-80       DE Specific RNA polymerase II transcription factor
#=GS J9VWX8/15-80       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A225Y235/15-80   AC A0A225Y235
#=GS A0A225Y235/15-80   OS Cryptococcus neoformans var. grubii c45
#=GS A0A225Y235/15-80   DE Specific RNA polymerase II transcription factor
#=GS A0A225Y235/15-80   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GF SQ 18
A0A1D8PCY0/40-117          RNYRACLNCRLRKVKCDLGPVDNPHDGKCARCLRERKDCVFVESKRGGT------TNVVNGKRKRQRASSRAMSRSETQSPDSN
E6RAU5/61-125              -GYRACTNCRLRKARCDLGDVNAPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREGSLDL----------PQ--
A0A1D8NBP8/68-132          -SYKACLNCRKRKIKCDLGDLSNPSKPPCARCRREGKQCVFVESKRGGV------ANVRAGKEKKRKLES----------PS--
B9W7A1/40-117              RNYRACLNCRLRKVKCDLGPVDNPHDGKCARCLRERKDCVFVESKRGGT------ANVVNGKRKKQRTSSTVMSRSETQSPDSN
Q5KBM6/89-155              -GYRACTNCRLRKARCDLGDVNSPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREESLDL----------PQTE
A0A0D0VLR7/61-125          -GYRACTNCRLRKARCDLGDVNAPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREGSLDL----------PQ--
A0A0D0YZT9/61-125          -GYRACTNCRLRKARCDLGDVNAPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREGSLDL----------PQ--
J9VUI7/91-156              -GYRACTNCRLRKARCDLGDVNSPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREEPLDL----------PQA-
C4YEV6/40-117              RNYRACLNCRLRKVKCDLGPVDNPHDGKCARCLRERKDCVFVESKRGGT------TNVVNGKRKRQRTSSRAMSRSETQSPDSN
Q6CBH8/68-132              -SYKACLNCRKRKIKCDLGDLSNPSKPPCARCRREGKQCVFVESKRGGV------ANVRAGKEKKRKLES----------PS--
A0A0D0YEZ9/61-125          -GYRACTNCRLRKARCDLGDVNAPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREGSLDL----------PQ--
A0A226BCE7/91-156          -GYRACTNCRLRKARCDLGDVNSPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREEPLDL----------PQA-
A0A225Y1F0/91-156          -GYRACTNCRLRKARCDLGDVNSPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREEPLDL----------PQA-
Q55N94/89-155              -GYRACTNCRLRKARCDLGDVNSPSEPPCSRCRREQRDCVFLPSKR------RRRTSVADPALREEALDL----------PQTE
Q5KBT2/15-80               -GYRACLHCRSRKAKCDLGDIDAPSSPPCSRCKRESRECVFAPSRRGGNNKKRARTDSEDISREDED-----------------
F5HDX4/15-80               -GYRACLHCRSRKAKCDLGDIDAPSSPPCSRCKRESRECVFAPSRRGGNNKKRARTDSEDISREDED-----------------
J9VWX8/15-80               -GYRACLHCRSRKAKCDLGDIDAPSSPPCSRCKRESRECVFAPSRRGGNNKKRARTDSEDISREDED-----------------
A0A225Y235/15-80           -GYRACLHCRSRKAKCDLGDIDAPSSPPCSRCKRESRECVFAPSRRGGNNKKRARTDSEDISREDED-----------------
#=GC scorecons             059899569949957999966559646696995994769995597933100032375645444555333200000000004200
#=GC scorecons_70          __****_***_**_*****_*__**_*_****_**_*****__***_________*_*__________________________
#=GC scorecons_80          __****__**_**__****____*____*_**_**_*_***__***_________*____________________________
#=GC scorecons_90          __****__**_**__****____*____*_**_**___***__*_*______________________________________
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