# STOCKHOLM 1.0 #=GF ID 4.10.110.10/FF/000006 #=GF DE Trefoil factor 1 #=GF AC 4.10.110.10/FF/000006 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 93.882 #=GS H2XY92/70-119 AC H2XY92 #=GS H2XY92/70-119 OS Ciona intestinalis #=GS H2XY92/70-119 DE trefoil factor 2-like #=GS H2XY92/70-119 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS F7C2Y4/111-167 AC F7C2Y4 #=GS F7C2Y4/111-167 OS Xenopus tropicalis #=GS F7C2Y4/111-167 DE Uncharacterized protein #=GS F7C2Y4/111-167 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS C3ZZ91/1-46 AC C3ZZ91 #=GS C3ZZ91/1-46 OS Branchiostoma floridae #=GS C3ZZ91/1-46 DE Uncharacterized protein #=GS C3ZZ91/1-46 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS G1NP11/24-78 AC G1NP11 #=GS G1NP11/24-78 OS Meleagris gallopavo #=GS G1NP11/24-78 DE Trefoil factor 2 #=GS G1NP11/24-78 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris; Meleagris gallopavo; #=GS F6QZB8/19-76 AC F6QZB8 #=GS F6QZB8/19-76 OS Monodelphis domestica #=GS F6QZB8/19-76 DE Uncharacterized protein #=GS F6QZB8/19-76 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; #=GS R4GDD5/179-231 AC R4GDD5 #=GS R4GDD5/179-231 OS Anolis carolinensis #=GS R4GDD5/179-231 DE Uncharacterized protein #=GS R4GDD5/179-231 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; #=GS G3N3Q9/24-74 AC G3N3Q9 #=GS G3N3Q9/24-74 OS Bos taurus #=GS G3N3Q9/24-74 DE Trefoil factor 1 #=GS G3N3Q9/24-74 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; #=GS A0A493TRR5/80-131 AC A0A493TRR5 #=GS A0A493TRR5/80-131 OS Anas platyrhynchos platyrhynchos #=GS A0A493TRR5/80-131 DE Trefoil factor 2 #=GS A0A493TRR5/80-131 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos; Anas platyrhynchos platyrhynchos; #=GS A0A226PJ54/10-63 AC A0A226PJ54 #=GS A0A226PJ54/10-63 OS Colinus virginianus #=GS A0A226PJ54/10-63 DE Uncharacterized protein #=GS A0A226PJ54/10-63 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Colinus; Colinus virginianus; #=GS A0A226MUE9/38-90 AC A0A226MUE9 #=GS A0A226MUE9/38-90 OS Callipepla squamata #=GS A0A226MUE9/38-90 DE Uncharacterized protein #=GS A0A226MUE9/38-90 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Callipepla; Callipepla squamata; #=GS E1BZ37/77-127 AC E1BZ37 #=GS E1BZ37/77-127 OS Gallus gallus #=GS E1BZ37/77-127 DE Trefoil factor 2 #=GS E1BZ37/77-127 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; #=GS R0J657/3-53 AC R0J657 #=GS R0J657/3-53 OS Anas platyrhynchos #=GS R0J657/3-53 DE Trefoil factor 1 #=GS R0J657/3-53 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos; #=GS F7AXF4/50-103 AC F7AXF4 #=GS F7AXF4/50-103 OS Ciona intestinalis #=GS F7AXF4/50-103 DE Uncharacterized protein #=GS F7AXF4/50-103 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS H2Y0E0/107-157 AC H2Y0E0 #=GS H2Y0E0/107-157 OS Ciona intestinalis #=GS H2Y0E0/107-157 DE integumentary mucin A.1-like #=GS H2Y0E0/107-157 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS F7AGL1/133-189 AC F7AGL1 #=GS F7AGL1/133-189 OS Xenopus tropicalis #=GS F7AGL1/133-189 DE Uncharacterized protein #=GS F7AGL1/133-189 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS B1H2Z4/197-253 AC B1H2Z4 #=GS B1H2Z4/197-253 OS Xenopus tropicalis #=GS B1H2Z4/197-253 DE LOC100145517 protein #=GS B1H2Z4/197-253 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS C3YWH1/1-49 AC C3YWH1 #=GS C3YWH1/1-49 OS Branchiostoma floridae #=GS C3YWH1/1-49 DE Uncharacterized protein #=GS C3YWH1/1-49 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3Y1U4/1-50 AC C3Y1U4 #=GS C3Y1U4/1-50 OS Branchiostoma floridae #=GS C3Y1U4/1-50 DE Uncharacterized protein #=GS C3Y1U4/1-50 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3YVW9/1-50 AC C3YVW9 #=GS C3YVW9/1-50 OS Branchiostoma floridae #=GS C3YVW9/1-50 DE Uncharacterized protein #=GS C3YVW9/1-50 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3YZG4/1-50 AC C3YZG4 #=GS C3YZG4/1-50 OS Branchiostoma floridae #=GS C3YZG4/1-50 DE Uncharacterized protein #=GS C3YZG4/1-50 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3YZH7/1-50 AC C3YZH7 #=GS C3YZH7/1-50 OS Branchiostoma floridae #=GS C3YZH7/1-50 DE Uncharacterized protein #=GS C3YZH7/1-50 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS F6QFL6/16-66 AC F6QFL6 #=GS F6QFL6/16-66 OS Xenopus tropicalis #=GS F6QFL6/16-66 DE Trefoil factor 1 #=GS F6QFL6/16-66 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS F7DPS8/24-75 AC F7DPS8 #=GS F7DPS8/24-75 OS Xenopus tropicalis #=GS F7DPS8/24-75 DE Trefoil factor 1 #=GS F7DPS8/24-75 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS F7AZ82/171-221 AC F7AZ82 #=GS F7AZ82/171-221 OS Xenopus tropicalis #=GS F7AZ82/171-221 DE Trefoil factor 2 #=GS F7AZ82/171-221 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS H2XVQ0/30-88 AC H2XVQ0 #=GS H2XVQ0/30-88 OS Ciona intestinalis #=GS H2XVQ0/30-88 DE Uncharacterized protein #=GS H2XVQ0/30-88 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS A0A1W5B985/44-101 AC A0A1W5B985 #=GS A0A1W5B985/44-101 OS Ciona intestinalis #=GS A0A1W5B985/44-101 DE uncharacterized protein LOC100181921 #=GS A0A1W5B985/44-101 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS H2XLH9/83-133 AC H2XLH9 #=GS H2XLH9/83-133 OS Ciona intestinalis #=GS H2XLH9/83-133 DE Uncharacterized protein #=GS H2XLH9/83-133 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GF SQ 27 H2XY92/70-119 --------CDRGYPHQRVNCGWAGISRAMCERNWDCCFD--DSVS-GVPFCYKHDRARQEE----- F7C2Y4/111-167 ----EIADCKAVPPGQRTECGSPGISADQCRKL-NCCFD--SSIS-GVKWCFYSSSQAQAQAQLQ- C3ZZ91/1-46 -------ECGV-EVSARRDCGSPGITQAECLQR-GCCFD--STTV-NAIMCFYKRGGL-------- G1NP11/24-78 -KPPSKCQCKI-AARERRNCGPPGISAADCRKA-GCCFN--ASVP-GVPWCFTAKPKKVKK----- F6QZB8/19-76 LLTQGEDTCNV-EPKKRVNCGWPGVTEQECLDK-KCCFD--TTVP-NTPWCFSPEAIETECIF--- R4GDD5/179-231 -----VRMCGM-APKKRVQCGYAGISADECLGK-GCCYEHYQYAP-KVPWCFEPSEKEGNF----- G3N3Q9/24-74 ETGKTAPSCSV-EPHQRRNCGHPGITAKECKEK-GCCFD--NTVR-GVPW-FDPLRK--------- A0A493TRR5/80-131 -------VCPA-DPRIRVNCGYPGITAKECTSR-KCCFR--AHPA-GVPWCFYHRTVEEGNISH-- A0A226PJ54/10-63 LSSTAKCQCKI-AARERRNCGPPGISAADCRKA-GCCFN--ASVP-GVPWCFTAKPKKV------- A0A226MUE9/38-90 LSSTAKCQCKI-AARERRNCGPPGISAADCRKA-GCCFN--ASVP-GVPWCFTAKPKK-------- E1BZ37/77-127 -----KKVCPA-DPRIRVNCGYPGITAKECISR-RCCFR--AHPA-GVPWCFYHRTVEEGC----- R0J657/3-53 --SAVKKVCPA-DPRIRVNCGYPGITAKECTSR-KCCFR--AHPA-GVPWCFYHRTVE-------- F7AXF4/50-103 ----RFDLCDI-SPVNRYDCGYEGISYSNCIRR-GCCWD--SSVQ-GTIWCFRHSITPTNHGQ--- H2Y0E0/107-157 ---STVRTCSA-APIDRVECGWSSISRQSCEAR-GCCFD--RSVR-GVPWCFQADSLLI------- F7AGL1/133-189 ----EIADCKAVPPGQRTECGSPGISADQCRKL-NCCFD--SSIS-GVKWCFYSSSQAQAQAQLQ- B1H2Z4/197-253 -----VADCKAVPPGQRTECGSPGISADQCRKL-NCCFD--SSIS-GVKWCFYSSSQAQAQAQLQA C3YWH1/1-49 -------ECLV-RPAMRKDCGWSGITRDECLLK-GCCFN--SSIP-GVASCFYKKGGSCCS----- C3Y1U4/1-50 --GMLPEECLV-EPSLRQECGWGGITQHQCRQR-GCCFD--SSVP-TMKWCFHKKGV--------- C3YVW9/1-50 -----ENECQLVDPYARQNCGWPGITADECQER-GCCWD--NSIR-GVKWCFNSTGGTI------- C3YZG4/1-50 ---ITENECQL-DPSARQDCGWGGITPAECQER-GCCFD--SSFQ-DAPWCFYSTGGA-------- C3YZH7/1-50 ---ITENECQL-DPSARQDCGWGDITPAECQGR-GCCFD--SSFQ-DAPWCFYSTGGA-------- F6QFL6/16-66 ---YTEEQCTV-ERLARVNCGYSGITADECTKH-GCCFD--SKVA-DAIWCYYPRATPA------- F7DPS8/24-75 QAAYTEEQCTV-ERLARVNCGYSGITADECTKH-GCCFD--SKVA-DAIWCYYPRAT--------- F7AZ82/171-221 ----ELLQCAV-LPKTRVNCGFPSITMDQCYQK-GCCYD--SSQS-DTIWCFYPDIEEVT------ H2XVQ0/30-88 ---VNVTQCKNIPEAVRVECGFAGITPKQCRAR-GCCFL--TTFTLNVPWCYSVQDSIPTPKTTT- A0A1W5B985/44-101 ---VNVTQCKNIPEAVRVECGFAGITPKQCRAR-GCCFL--TTFTLNVPWCYSVQDSIPTPKTT-- H2XLH9/83-133 -----DFTCDNVSVTDRIECGWSGITQVDCFLR-GCCYLN-AGSV-YDKWCYHTKYGTL------- #=GC scorecons 000012239340353393599357864359334069974004443055478743333210000000 #=GC scorecons_70 ________*_______*__**__***___*_____***___________***______________ #=GC scorecons_80 ________*_______*__**__**____*_____***___________***______________ #=GC scorecons_90 ________*_______*__**___*____*_____**_____________*_______________ //