# STOCKHOLM 1.0
#=GF ID 3.90.79.10/FF/000096
#=GF DE Isopentenyl-diphosphate Delta-isomerase
#=GF AC 3.90.79.10/FF/000096
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.411
#=GS Q9NH02/1-239      AC Q9NH02
#=GS Q9NH02/1-239      OS Dictyostelium discoideum
#=GS Q9NH02/1-239      DE Isopentenyl-diphosphate Delta-isomerase
#=GS Q9NH02/1-239      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q9NH02/1-239      DR EC; 5.3.3.2; 
#=GS G5EFQ1/4-235      AC G5EFQ1
#=GS G5EFQ1/4-235      OS Caenorhabditis elegans
#=GS G5EFQ1/4-235      DE Isopentenyl-diphosphate isomerase
#=GS G5EFQ1/4-235      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS E9G5N5/1-222      AC E9G5N5
#=GS E9G5N5/1-222      OS Daphnia pulex
#=GS E9G5N5/1-222      DE Uncharacterized protein
#=GS E9G5N5/1-222      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A0A2K3D775/2-252  AC A0A2K3D775
#=GS A0A2K3D775/2-252  OS Chlamydomonas reinhardtii
#=GS A0A2K3D775/2-252  DE Uncharacterized protein
#=GS A0A2K3D775/2-252  DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS A8JF38/45-306     AC A8JF38
#=GS A8JF38/45-306     OS Chlamydomonas reinhardtii
#=GS A8JF38/45-306     DE Isopentenyl-diphosphate delta-isomerase
#=GS A8JF38/45-306     DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS H3GV87/18-258     AC H3GV87
#=GS H3GV87/18-258     OS Phytophthora ramorum
#=GS H3GV87/18-258     DE Uncharacterized protein
#=GS H3GV87/18-258     DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS B8BSS3/2-253      AC B8BSS3
#=GS B8BSS3/2-253      OS Thalassiosira pseudonana
#=GS B8BSS3/2-253      DE Isopentenyl-dephosphate delta-isomerase-like protein
#=GS B8BSS3/2-253      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS F6SSS9/15-238     AC F6SSS9
#=GS F6SSS9/15-238     OS Ciona intestinalis
#=GS F6SSS9/15-238     DE Uncharacterized protein
#=GS F6SSS9/15-238     DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS F0ZHC1/3-239      AC F0ZHC1
#=GS F0ZHC1/3-239      OS Dictyostelium purpureum
#=GS F0ZHC1/3-239      DE Isopentenyl-diphosphate D-isomerase
#=GS F0ZHC1/3-239      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS A8Y3J7/7-239      AC A8Y3J7
#=GS A8Y3J7/7-239      OS Caenorhabditis briggsae
#=GS A8Y3J7/7-239      DE Protein CBR-IDI-1
#=GS A8Y3J7/7-239      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5ULK2/7-238  AC A0A2G5ULK2
#=GS A0A2G5ULK2/7-238  OS Caenorhabditis nigoni
#=GS A0A2G5ULK2/7-238  DE Uncharacterized protein
#=GS A0A2G5ULK2/7-238  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 11
Q9NH02/1-239              ----MATKSNEENIA----EFKGHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLM-VN--INNGLLHRAFSIFLFN-GEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGS-ELVEENAQ------GVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKE-------DPQWGEHEIDHILIMQKD---GITI-NAEPNEVMDYKYVSQEELDQLFKDEDEGKVKVTPWFRLIALNH---LKPWWNNLNNLKP--LVEPTN--TIHRY-
G5EFQ1/4-235              SLRGLSQIGMARRA----VELSSYDAQQVEYM-REQCINVDENDRIIGGVSKREAH----S--SYQLVLHRAFSVFSFT-SDNKLLMQKRSAEKITFPNLWTNTCCSHPLHT----QQEMDGVP------GAKRAAIRKLEHELGI--TGVSLNKFQMAGKYIYRAEMN--------NAPWGEHELDYALILRGIG--AENC-NINENEVAEVREVVLDELKLWM---RKEPNSFTPWLKLFSQTET--FEKWWTINKNTEE--SIEDTN---IYKL-
E9G5N5/1-222              -----------------------MDPTQALLL-QEQCISVDTNDKAVGNLSKEAAHLLGPD--GQLPPLHRAFSVFLFN-TKNELLMQQRSNHKVTFPGYYTNSCCSHPLHNTTPDEAEEAHHV------GIRRAARRRLEIELGISPESIELSDFKILTRIIYGAPS---------DAKWGEHEVDYILFLRKD----VPV-KPNPNEVSRVVFVSLSGFQEFQGYLEKNNIPFTPWFKLILNSH---LKVWWNQLDNLE---RIEYDP--VIHSL-
A0A2K3D775/2-252          --------------A-SSSTWEGTGLSQDDFMQRDECLVVDEQDRLLGTANKYDCHRFEAAKGQPCGRLHRAFSVFLFS-PDGRLLLQQRAASKVTFPGVWTNTCCSHPLAGQAPDEVDLPAAVASGQVPGIKAAAVRKLQHELGIPPEQVPASSFSFLTRLHYCAADTATHGP---AAEWGEHEVDYVLFVRPQQ--PVSL-QPNPDEVDATRYVTLPELQSMM---ADPGLSWSPWFRILATQPAF-LPAWWGDLEAALAPGGSRLSDWGTIHRV-
A8JF38/45-306             ---LSQAQSVAVRMA-SSSTWEGTGLSQDDFMQRDECLVVDEQDRLLGTANKYDCHRFEAAKGQPCGRLHRAFSVFLFS-PDGRLLLQQRAASKVTFPGVWTNTCCSHPLAGQAPDEVDLPAAVASGQVPGIKAAAVRKLQHELGIPPEQVPASSFSFLTRLHYCAADTATHGP---AAEWGEHEVDYVLFVRPQQ--PVSL-QPNPDEVDATRYVTLPELQSMM---ADPGLSWSPWFRILATQPAF-LPAWWGDLEAALAPGGSRLSDWGTIHRV-
H3GV87/18-258             -RSGAAAFGTAGRVT-FEELTAGADAEQLEFM-KEQIVQVDEQDAVQGPISKKDAH-------IHDGVLHRAFSVFVFN-SKNELLIQKRASEKITFPGFWANTCCSHPLFT----EGELEDGV------GVKRAAIRKLEHELGIPTTTFAIEDLAYVSTVMYKARCLWLNPRAASDENWTEYEMDHILFARGE----VSLDNVNENEVEQVEFIARENLPALL---NDTTRKLSPWFHLIGSNL---LPHWWDNLDAVLV--KDSADH--QIHD--
B8BSS3/2-253              -----------------GRKWDGSAMSQTEFMERDTVLVVNDDDVVIGSESKRSAHEFTPS--QPRGVLHRAFSVFLFDESTSELLLQKRASSKITFPNVWTNTCCSHPLHGMDVNEVDGPEDVMDGSVRGVKAAAIRKLNHELGIPFGELAVEDFKFLTRVHYWAADSVTHGTKRCVVPWGENEIDYILFAAVSTKSTLTI-NPHPDEVDDVRWVKPFELIEMF---DDSSLLFSPWFRIIAYRWMIGDKGWWNDLERTMT--TYDFCDFESLHRF-
F6SSS9/15-238             VSHLKNPFSTSGRMA-DSVDLNTYDTSQVKLM-KEECIEVDSDDNVIGPRSKLDCHLL-----SNGPPLHRAFSLFLFN-SKNELLMQKRANAKITFPGYYTNTCCSHPLHNAT--ELEEKESY------GVRHAAQRRLKDELGVPINQLPICDISFITRIHYKASC---------SDKWGEHEIDHVLFARKD----VDL-NVNPNEVSEVRYVSKDGMKDFTKKCENAGVPLTPWFKLILHSH---LFKWWDNI---------------------
F0ZHC1/3-239              ---------TSENIT-IGDEFKGHNETQIQLM-KEECIIVDNNDVALKPGSKKETHLM-VN--INQGLLHRAFSIFLFN-KEGKLLLQQRALEKITFPGYWTNTVCSHPLWIPET-ELKEENAY------GVRCAAKRKLNHELGVPLNEVDIEDFTFMTKIHYKSESKE-------DPKWGEHEIDHILIAQKD---HVTI-NAEPNEVMDYKYVSKEELQQMFEDEDNGKIKLTPWFRLIAVNH---LNKWWDNLHDLKP--LVEPTN--TIHRY-
A8Y3J7/7-239              -LRGLSALAPRRQEQQCHVELASYNAKQVEYM-REACISVDENDDIIGAISKRDAH----S--SQQLTLHRAFSVFSFT-KDNKLLMQKRSAEKITFPNLWTNTCCSHPLHT----PQEMDGAI------GAKRAAIRKLDHELGI--TEVHTDRLQMNGRWIYRAEMD--------EAPWGEHELDYALILRGIG--ADHC-RINENEVAEIREVGMDELRNWM---EQEPSSFTPWLKLFSKTKT--FEKWWSQKASTA-----EDMK---IYKLH
A0A2G5ULK2/7-238          -LRGLSALAPRQKE--CHVELAAYDAQQVEYM-REACISVDENDEIIGAISKRDAH----S--SQQLTLHRAFSVFSFT-KDNKLLMQKRSAEKITFPNLWTNTCCSHPLHT----PLEMDGAI------GAKRAAIRKLEHELGI--TGIQTDRLQMNGRWIYRAEMD--------EAPWGEHELDYALILRGIG--ADHC-RINENEVAEIREVGMDELRIWM---EQEPSSFTPWLKLFSKTKT--FEKWWSQKASTS---SEEDMK---IYKL-
#=GC scorecons            00011111111121201123324343393558067466398559345643793559120120033343999999795940345599696964497999546897699999341110635333430000009573993979469997414453444635456349474320000000034397979597595463310014340546569934453833367333400044333446996665423310053399444333210011422300165420
#=GC scorecons_70         ___________________________*___*_**_**_**__*___*__**___*____________********_*______**_***___*****__**********____________________*_*_**_***_*****______________*__*_*______________*****_**_*__*____________*_***_____*___**_______________*****___________**___________________*____
#=GC scorecons_80         ___________________________*___*__*____**__*______**___*____________******_*_*______**_*_*___*****___***_*****____________________*_*_**_***__****_________________*_*______________*****_*__*__________________**_____*____*_______________**______________**________________________
#=GC scorecons_90         ___________________________*___*_______*___*_______*___*____________******_*_*______**_*_*___*_***____*__*****____________________*___**_*_*__***__________________*________________*_*_*_*__*__________________**_____*____________________**______________**________________________
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