# STOCKHOLM 1.0
#=GF ID 3.90.79.10/FF/000086
#=GF DE Cleavage and polyadenylation specificity factor subunit 5
#=GF AC 3.90.79.10/FF/000086
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.162
#=GS Q57WN8/69-299      AC Q57WN8
#=GS Q57WN8/69-299      OS Trypanosoma brucei brucei TREU927
#=GS Q57WN8/69-299      DE Uncharacterized protein
#=GS Q57WN8/69-299      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q57WN8/69-299      DR GO; GO:0006378; 
#=GS J9VTG7/7-217       AC J9VTG7
#=GS J9VTG7/7-217       OS Cryptococcus neoformans var. grubii H99
#=GS J9VTG7/7-217       DE Cleavage and polyadenylation specificity factor subunit 5
#=GS J9VTG7/7-217       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A1D6JIG9/7-207   AC A0A1D6JIG9
#=GS A0A1D6JIG9/7-207   OS Zea mays
#=GS A0A1D6JIG9/7-207   DE DNA mismatch repair protein MSH3
#=GS A0A1D6JIG9/7-207   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS Q4Q9G2/5-267       AC Q4Q9G2
#=GS Q4Q9G2/5-267       OS Leishmania major
#=GS Q4Q9G2/5-267       DE Uncharacterized protein
#=GS Q4Q9G2/5-267       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS A0A1G4IHM0/69-299  AC A0A1G4IHM0
#=GS A0A1G4IHM0/69-299  OS Trypanosoma equiperdum
#=GS A0A1G4IHM0/69-299  DE Nucleotide hydrolase, putative
#=GS A0A1G4IHM0/69-299  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS E9BI41/5-267       AC E9BI41
#=GS E9BI41/5-267       OS Leishmania donovani BPK282A1
#=GS E9BI41/5-267       DE Uncharacterized protein
#=GS E9BI41/5-267       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9AY11/6-267       AC E9AY11
#=GS E9AY11/6-267       OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AY11/6-267       DE Uncharacterized protein
#=GS E9AY11/6-267       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS C9ZS54/69-299      AC C9ZS54
#=GS C9ZS54/69-299      OS Trypanosoma brucei gambiense DAL972
#=GS C9ZS54/69-299      DE Uncharacterized protein
#=GS C9ZS54/69-299      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A4I1W6/5-267       AC A4I1W6
#=GS A4I1W6/5-267       OS Leishmania infantum
#=GS A4I1W6/5-267       DE Nucleotide_hydrolase_-_putative
#=GS A4I1W6/5-267       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS Q5KEC3/7-217       AC Q5KEC3
#=GS Q5KEC3/7-217       OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KEC3/7-217       DE Uncharacterized protein
#=GS Q5KEC3/7-217       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A3S7WZJ5/5-267   AC A0A3S7WZJ5
#=GS A0A3S7WZJ5/5-267   OS Leishmania donovani
#=GS A0A3S7WZJ5/5-267   DE Nucleotide hydrolase, putative
#=GS A0A3S7WZJ5/5-267   DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A226BGA8/7-217   AC A0A226BGA8
#=GS A0A226BGA8/7-217   OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BGA8/7-217   DE Cleavage and polyadenylation specificity factor subunit 5
#=GS A0A226BGA8/7-217   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A225Y512/7-217   AC A0A225Y512
#=GS A0A225Y512/7-217   OS Cryptococcus neoformans var. grubii c45
#=GS A0A225Y512/7-217   DE Cleavage and polyadenylation specificity factor subunit 5
#=GS A0A225Y512/7-217   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GF SQ 13
Q57WN8/69-299              --------------------------------GGTTNSERRIKTPLEKLMSLRARCREQQRVQSVEGVLLVHAHDHPHVLLLRH-NVKT--TNRSRVLPATNTNSTAVYRLPGGRCRNGEPEELCLLRKLGRDLLNESKR-LTSSSTAEEERSEVVVDVGSAHPNGTAVTASSSSFRVGEVLARWYRPHFDPLMYPYVPAHVAENDVREVRTIFLVHMPPRMLLTGTYGDEELVAAPLFDLYDNTAKYGVLIASIPTLLSRVNINYC
J9VTG7/7-217               NTIEAFPLRNYL-------------------FIEREGQPEEDNSVTNRLKRLEDQYTESGTRRSVEAIMVVTVHGFPHVLVLQV--------------------ANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTT-FKGKGEDDLPHTVWLAPEEGRD------------WEVRDCLSVWYRPHFDTFIYPYAPAHVSYP--KECKKLYLVNLPPNKTF-AVPANMKLHAIPVFEFYDNAARYGPQFAGIPYILSRFVMSQ-
A0A1D6JIG9/7-207           SVVNVYPLANYT-------------------FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI--------------------GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPS-FPPNWQLGQHKSLPVVKKGVHD----------CHFQVGECVAVWWRPNFETVMYPYCPPHITKP--KECKKLFIVHLSEREYF-AVPRNLKLLAVPLFELYDNIQ------------LEARATSR-
Q4Q9G2/5-267               AKLDVYPVENYTQTSVDVSNGHAGVAGNKVNLGAGSAAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINSRTRDADGMRTVPPSNTNAEVTYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKTPAGAAEVASTGNSDTVVDVGMTH----TASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFTMVQESVELVAAPLFDLYENSSKYGPIVASLPVLLSRVLINYC
A0A1G4IHM0/69-299          --------------------------------GGTTNSERRIKTPLEKLMSLRARCREQQRVQSVEGVLLVHAHDHPHVLLLRH-NVKT--TNRSRVLPATNTNSTAVYRLPGGRCRNGEPEELCLLRKLGRDLLNESKR-LTSSSTAEEERSEVVVDVGSAHPNGTAVTASSSSFRVGEVLARWYRPHFDPLMYPYVPAHVAENDVREVRTIFLVHMPPRMLLTGTYGDEELVAAPLFDLYDNTAKYGVLIASIPTLLSRVNINYC
E9BI41/5-267               AKLDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRDADGMRTVPPSNTNAEATYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTH----NASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFSMVQEGVELVAAPLFDLYENASKYGPIIASLPALLSRVLINYC
E9AY11/6-267               -KLDVYPVENYTQTSVDISNGHAGVAGNKVNLGVGSSAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRDADGVRTVPPSNTNAEVTYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKTPAGAAEGTSASNSDTVVDVGMTH----SASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTVYLVHLEPTVYFNMVQEGVELVAAPLFDLYENSSKYGPIIASLPVLLSRVLINYC
C9ZS54/69-299              --------------------------------GGTTNSERRIKTPLEKLMSLRARCREQQRVQSVEGVLLVHAHDHPHVLLLRH-NVKT--TNRSRVLPATNTNSTAVYRLPGGRCRNGEPEELCLLRKLGRDLLNESKR-LTSSSTAEEERSEVVVDVGSAHPNGTAVTASSSSFRVGEVLARWYRPHFDPLMYPYVPAHVAENDVREVRTIFLVHMPPRMLLTGTYGDEELVAAPLFDLYDNTAKYGVLIASIPTLLSRVNINYC
A4I1W6/5-267               AKLDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTHDADGMRTVPPSNTNAEATYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTH----NASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRAIYLVHLEPTVYFSMVQEGVELVAAPLFDLYENASKYGPIIASLPALLSRVLINYC
Q5KEC3/7-217               DTIEAFPLRNYL-------------------FIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVTVHGFAHVLVLQV--------------------ANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTT-LKGKDEDDLPRTVWLAPEGGRD------------WEVRDCLSVWYRPHFDTFLYPYAPAHVSYP--KECKKLYLVNLPPNKTF-AVPANMKLHAIPIFEFYDNAARYGPQFAGIPYILSKFVMSQ-
A0A3S7WZJ5/5-267           AKLDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRDADGMRTVPPSNTNAEATYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTH----NASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFSMVQEGVELVAAPLFDLYENASKYGPIIASLPALLSRVLINYC
A0A226BGA8/7-217           NTIEAFPLRNYL-------------------FIEREGQPEEDNSVTNRLKRLEDQYTESGTRRSVEAIMVVTVHGFPHVLVLQV--------------------ANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTT-LKGNGEDDLPHTVWLAPEGGRD------------WEVRDCLSVWYRPHFDTFLYPYAPAHVSYP--KECKKLYLVNLPPNKTF-AVPANMKLHAIPVFEFYDNAARYGPQFAGIPYILSRFVMSQ-
A0A225Y512/7-217           NTIEAFPLRNYL-------------------FIEREGQPEEDNSVTNRLKRLEDQYTESGTRRSVEAIMVVTVHGFPHVLVLQV--------------------ANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPITT-LKGKGEDDLPHTVWLAPEGGRD------------WEVRDCLSVWYRPHFDTFLYPYAPAHVSYP--KECKKLYLVNLPPNKTF-AVPANMKLHAIPVFEFYDNAARYGPQFAGIPYILSRFVMSQ-
#=GC scorecons             223334542553000000000000000000035444445353464467935853563744345999676695494689796653021220011112112112226564879999545469474359557955494544540444433443346336644834500001111113255967586497997956469995979753412795756789674743471464444694959697697955577434755725977446652
#=GC scorecons_70          ___________________________________________*___**__*___*_*_____***_****__*__******________________________*_******____**_*___*__**___*__________________*__**__*_________________*_*_**_******___****_****_____**_*__*****_*___*__*_____*_*_********___**___*__*__***______
#=GC scorecons_80          ________________________________________________*__*_____*_____***____*__*__**_*____________________________*_****_____*_*___*__**___*_________________________*_________________*_*_*__******____***_***_______*____***_*_*____________*_*_*_*__***___**___*__*__**_______
#=GC scorecons_90          ________________________________________________*__*___________***____*__*__**_*______________________________****_____*_____*___*___*_________________________*_________________*______*_**_*____***_*_*_______*______*________________*_*_*_*__*_*______________*________
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