# STOCKHOLM 1.0
#=GF ID 3.90.70.80/FF/000032
#=GF DE Deubiquitylating with USP/UBP and OTU domains
#=GF AC 3.90.70.80/FF/000032
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.654
#=GS Q7JLI8/644-767      AC Q7JLI8
#=GS Q7JLI8/644-767      OS Caenorhabditis elegans
#=GS Q7JLI8/644-767      DE Deubiquitylating with USP/UBP and OTU domains
#=GS Q7JLI8/644-767      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS U4PBM0/637-779      AC U4PBM0
#=GS U4PBM0/637-779      OS Caenorhabditis elegans
#=GS U4PBM0/637-779      DE Deubiquitylating with USP/UBP and OTU domains
#=GS U4PBM0/637-779      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS U4PBZ5/482-623      AC U4PBZ5
#=GS U4PBZ5/482-623      OS Caenorhabditis elegans
#=GS U4PBZ5/482-623      DE Deubiquitylating with USP/UBP and OTU domains
#=GS U4PBZ5/482-623      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS U4PMF4/321-462      AC U4PMF4
#=GS U4PMF4/321-462      OS Caenorhabditis elegans
#=GS U4PMF4/321-462      DE Deubiquitylating with USP/UBP and OTU domains
#=GS U4PMF4/321-462      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A2G5VII0/486-627  AC A0A2G5VII0
#=GS A0A2G5VII0/486-627  OS Caenorhabditis nigoni
#=GS A0A2G5VII0/486-627  DE Uncharacterized protein
#=GS A0A2G5VII0/486-627  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8WS95/609-752      AC A8WS95
#=GS A8WS95/609-752      OS Caenorhabditis briggsae
#=GS A8WS95/609-752      DE Protein CBR-DUO-3
#=GS A8WS95/609-752      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5VIU9/491-632  AC A0A2G5VIU9
#=GS A0A2G5VIU9/491-632  OS Caenorhabditis nigoni
#=GS A0A2G5VIU9/491-632  DE Uncharacterized protein
#=GS A0A2G5VIU9/491-632  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5VIK1/475-616  AC A0A2G5VIK1
#=GS A0A2G5VIK1/475-616  OS Caenorhabditis nigoni
#=GS A0A2G5VIK1/475-616  DE Uncharacterized protein
#=GS A0A2G5VIK1/475-616  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8WS96/537-677      AC A8WS96
#=GS A8WS96/537-677      OS Caenorhabditis briggsae
#=GS A8WS96/537-677      DE Protein CBR-DUO-2
#=GS A8WS96/537-677      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 9
Q7JLI8/644-767              ------------------MYQFQLPGATRGITPDGNCFYRAISWWITGVQSHHMIFREAVGKHLKKNELMFKKYC-HNEIYEKYVENAMRDGVWATTCEIFAMANMLNVEIITYLGDSGWVPHSPQNNYPPRKGAIYLKNTN------M
U4PBM0/637-779              RDDVKIHVEKLENEKSVVMKKFDRPGRVKGIESDGNCFYRAISWCLTGSQKYHKALRIATANYLRNDIAIVDKYC-HKTDHKTYVQQVEGDGWWATNVEICVMANLLNVNIYTFL-SDGWICTSPQNSSTSRSGSFYLENKDCHY----
U4PBZ5/482-623              RDDVKIHVEKLENEKSVVMKKFDRPGRVKGIESDGNCFYRAISWCLTGSQKYHKALRIATANYLRNDIAIVDKYC-HKTDHKTYVQQVEGDGWWATNVEICVMANLLNVNIYTFL-SDGWICTSPQNSSTSRSGSFYLENKDCH-----
U4PMF4/321-462              RDDVKIHVEKLENEKSVVMKKFDRPGRVKGIESDGNCFYRAISWCLTGSQKYHKALRIATANYLRNDIAIVDKYC-HKTDHKTYVQQVEGDGWWATNVEICVMANLLNVNIYTFL-SDGWICTSPQNSSTSRSGSFYLENKDCH-----
A0A2G5VII0/486-627          ---LRSHVKKLGKIISSDMAKNDEPDQIQEIEADGNCFFRAISWCLTGSEAHHKKLRRATAEYLKNNKPSLKKY---QSNFEAHAKKMKQNAEWATNCEVVAISKMLSVNIYTYL-SSGWTCQSPSNNEVTAVGSIYLNNVSEHYEPVL
A8WS95/609-752              -AILRTHVKKLAKIRPSDMTKNDEPDQIQEIEADGNCFFRAISWCLTGSEAHHKKLRRATADYLKDNKPALKKY---QSNFEAHAKKMKQNAEWATNCEVAAISKMLSVNIYTYL-SSGWTCQSPSNNEVTVVGSIYLNNVSEHYEPVL
A0A2G5VIU9/491-632          ---LRSHVKKLGKIISSDMAKNDEPDQIQEIEADGNCFFRAISWCLTGSEAHHKKLRRATAEYLKNNKPSLKKY---QSNFEAHAKKMKQNAEWATNCEVVAISKMLSVNIYTYL-SSGWTCQSPSNNEVTAVGSIYLNNVSEHYEPVL
A0A2G5VIK1/475-616          ---LRSHVKKLGKIISSDMAKNDEPDQIQEIEADGNCFFRAISWCLTGSEAHHKKLRRATAEYLKNNKPSLKKY---QSNFEAHAKKMKQNAEWATNCEVVAISKMLSVNIYTYL-SSGWTCQSPSNNEVTAVGSIYLNNVSEHYEPVL
A8WS96/537-677              -----CHLETLKHESGKQMTRTDLPGKTAFISADGNCFYRAISWCLTGSQRYHRKLRIATSEYLKKNEESMRKFCGGELDYKKYVENVRKDGEWATSCEIYAVANLLDVEIVTFLGSSGWRSHVPHDGG-SSKECIFLSNTSCHFEP--
#=GC scorecons              00023265446233242293647396454495599999799999779966469547939764797563345598302434554765454466399965973666669596959790769945479475335437668949352622211
#=GC scorecons_70           __________________*_*_*_*_____*__*****************_**__**_**__***_*_____**_________*______*__***__**_*___**_***_***_*_**___**_*______*__**_*_________
#=GC scorecons_80           __________________*_____*_____*__***************____*__**_*___***_______**___________________***__*_______*_*_*_***___**___**_*______*__**_*_________
#=GC scorecons_90           __________________*_____*_____*__*****_*****__**____*___*_*____*________**___________________***__*_______*_*_*_*_*___**____*___________**_*_________
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