# STOCKHOLM 1.0
#=GF ID 3.90.70.70/FF/000001
#=GF DE Replicase polyprotein 1ab
#=GF AC 3.90.70.70/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 26.589
#=GS Q04561/269-385      AC Q04561
#=GS Q04561/269-385      OS Lelystad virus
#=GS Q04561/269-385      DE Replicase polyprotein 1ab
#=GS Q04561/269-385      DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Eurpobartevirus; Betaarterivirus suid 1; 
#=GS Q04561/269-385      DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS A0MD28/268-385      AC A0MD28
#=GS A0MD28/268-385      OS PRRSV SD 01-08
#=GS A0MD28/268-385      DE Replicase polyprotein 1ab
#=GS A0MD28/268-385      DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GS A0MD28/268-385      DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS A0A1P8NRR6/269-385  AC A0A1P8NRR6
#=GS A0A1P8NRR6/269-385  OS Porcine reproductive and respiratory syndrome virus
#=GS A0A1P8NRR6/269-385  DE ORF1a
#=GS A0A1P8NRR6/269-385  DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GS Q6UN13/268-385      AC Q6UN13
#=GS Q6UN13/268-385      OS Porcine reproductive and respiratory syndrome virus
#=GS Q6UN13/268-385      DE Replicase polyprotein 1A
#=GS Q6UN13/268-385      DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GS A0A1P8NRM4/269-385  AC A0A1P8NRM4
#=GS A0A1P8NRM4/269-385  OS Porcine reproductive and respiratory syndrome virus
#=GS A0A1P8NRM4/269-385  DE ORF1a
#=GS A0A1P8NRM4/269-385  DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GS P0DJZ9/269-385      AC P0DJZ9
#=GS P0DJZ9/269-385      OS Lelystad virus
#=GS P0DJZ9/269-385      DE Replicase polyprotein 1TF
#=GS P0DJZ9/269-385      DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Eurpobartevirus; Betaarterivirus suid 1; 
#=GS A0A068CNV7/269-384  AC A0A068CNV7
#=GS A0A068CNV7/269-384  OS Porcine reproductive and respiratory syndrome virus
#=GS A0A068CNV7/269-384  DE NSP1b
#=GS A0A068CNV7/269-384  DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GS A0A1P8NRK3/270-385  AC A0A1P8NRK3
#=GS A0A1P8NRK3/270-385  OS Porcine reproductive and respiratory syndrome virus
#=GS A0A1P8NRK3/270-385  DE ORF1a
#=GS A0A1P8NRK3/270-385  DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GS P0DJY0/268-385      AC P0DJY0
#=GS P0DJY0/268-385      OS PRRSV SD 01-08
#=GS P0DJY0/268-385      DE Truncated polyprotein 1aTF
#=GS P0DJY0/268-385      DR ORG; Viruses; Nidovirales; Arnidovirineae; Arteriviridae; Porcine reproductive and respiratory syndrome virus; 
#=GF SQ 9
Q04561/269-385              -PDVFDGKCWLSCFLGQSVEVRCHEEHLADAFGYQTKWGVHGKYLQRRLQVRGIRAVVDPDGPIHVEALSCPQSWIRHLTLDDDVTPGFVRLTSLRIVPNTEPTTSRIFRFGAHKWYG
A0MD28/268-385              NPNVFDGKCWLTCFLGQSAEVCYHEEHLANALGYQTKWGVHGKYLQRRLQVRGMRAVVDPDGPIHVEALSCSQSWVRHLTLNNDVTPGFVRLTSIRIVSNTEPTAFRIFRFGAHKWYG
A0A1P8NRR6/269-385          -PDVFDGKCWLTCFLGQSVEVRCHEEHLANAFGYQTKWGVHGKYLQRRLQVRGIRAVVDPDGPIHVEALSCPQSWIRHLTLSDDVTPGFIRLTSIRIVPNTEPTTFRIFRFGAHKWYG
Q6UN13/268-385              NSNVFDGKCWLTCFLGQSVEVRCHEEHLANAFGYQTKWGVHGKYLQRRLQVRGIRAVVDPDGPIHVEALSCSQSWIRHLTLNDDVTPGFVRLTSIRIVPNTEPTTSQIFRFGAHKWYG
A0A1P8NRM4/269-385          -PDVFDSKCWLTCFSGQSVEVRRCEEHLANALGYQTKWGVHGKYLQRRLQVRGIRAVVDPDGPIHVEALSCSQSWIRHLTLNDGVTPGFVRLTSIRIVPNTEPTTFRIFRFGAHKWYG
P0DJZ9/269-385              -PDVFDGKCWLSCFLGQSVEVRCHEEHLADAFGYQTKWGVHGKYLQRRLQVRGIRAVVDPDGPIHVEALSCPQSWIRHLTLDDDVTPGFVRLTSLRIVPNTEPTTSRIFRFGAHKWYG
A0A068CNV7/269-384          -PDVFDGKCWLSCFLGQSVEVRCHEEHLADAFGYQTKWGVHGKYLQRRLQVRGIRAVVDPDGPIHVEALSCSQSWIRHLTLDDDVTPGFVRLTSLRIVPNTEPTTSRIFRFGAHKWY-
A0A1P8NRK3/270-385          --NGFDGKCWLTCFLGQSVEVYCHEEHLANALGYQTKWGVHGKYLQRRLQVRGMRAVVDPDGPIHVEALSCPQSWVRHLALNDDVTPGFVRLTSIRIVSNTEPTAFRIFRFGAHKWYG
P0DJY0/268-385              NPNVFDGKCWLTCFLGQSAEVCYHEEHLANALGYQTKWGVHGKYLQRRLQVRGMRAVVDPDGPIHVEALSCSQSWVRHLTLNNDVTPGFVRLTSIRIVSNTEPTAFRIFRFGAHKWYG
#=GC scorecons              0567997999969979996995579999969699999999999999999999969999999999999999969997999795779999989999699969999965899999999997
#=GC scorecons_70           __*******************__********_***************************************_*********_****************_******_************
#=GC scorecons_80           ____*******_**_***_**__******_*_*********************_*****************_***_*****__***********_***_*****__***********_
#=GC scorecons_90           ____**_****_**_***_**___*****_*_*********************_*****************_***_***_*___**********_***_*****___**********_
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