# STOCKHOLM 1.0
#=GF ID 3.90.70.40/FF/000013
#=GF DE JOSephin Domain protein
#=GF AC 3.90.70.40/FF/000013
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.539
#=GS Q8IAA2/16-171      AC Q8IAA2
#=GS Q8IAA2/16-171      OS Caenorhabditis elegans
#=GS Q8IAA2/16-171      DE JOSephin Domain protein
#=GS Q8IAA2/16-171      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS T1FYS9/15-171      AC T1FYS9
#=GS T1FYS9/15-171      OS Helobdella robusta
#=GS T1FYS9/15-171      DE Uncharacterized protein
#=GS T1FYS9/15-171      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS H3F5N9/10-165      AC H3F5N9
#=GS H3F5N9/10-165      OS Pristionchus pacificus
#=GS H3F5N9/10-165      DE Uncharacterized protein
#=GS H3F5N9/10-165      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5UNV9/16-172  AC A0A2G5UNV9
#=GS A0A2G5UNV9/16-172  OS Caenorhabditis nigoni
#=GS A0A2G5UNV9/16-172  DE Uncharacterized protein
#=GS A0A2G5UNV9/16-172  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8WMS1/16-173      AC A8WMS1
#=GS A8WMS1/16-173      OS Caenorhabditis briggsae
#=GS A8WMS1/16-173      DE Protein CBG00486
#=GS A8WMS1/16-173      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 5
Q8IAA2/16-171              YCLIHTVNNILQKSEFDPTKMDEICYAFNESKWFNPHRSWIGTGNYDANILMAALQKHDLKVMWFDKRVSVEKINMENVKAVVFNIPSRTLLTL------YRGRHWFAVIQK-NGIFYNVDSKIKQPQVIEDIRKFVKIHVDSPDSEVMLVVENSVDEATVVD--
T1FYS9/15-171              LCALHCLNNLLQKEVFTKAILDETCEKLTDKKWFNPHRSYIGTGNYDVNVIMSALESINYSITWFDRRKSYTEVDWNNIFGIIVNCKSS-FFTYGPINIPSPRKHWFAVRKLSDNLFYNLDSKLNSPQVIGTADQLIEFLNEKSSCDISILIVNKSPV-------
H3F5N9/10-165              LCLVHALNAIMQQEEFTEESLNEICYSLDERKWFNPHKSWLNLGNYDVNVLMAALATKDLQMMWFDSRQDPARIRLEFVKAFIVNVPGR-YIPF------MTNRHWFTILQRDDGAFVNLDSKLEEPELIRDIVAYIREKFEKTEDKVQVMIVSSMDSAELLK--
A0A2G5UNV9/16-172          YCLIHTVNNILQKKEFDATKMDEICYGMNESKWFNPHRSWIGTGNYDVNILMAALQKHNLKVVWFDKRLGVEKIKFEKLRATVFNIPSRTLLTL------YRGRHWFAVVQK-NGIFYNLDSKLSKPTVIEEISNFTKSHVDSGDSEVMLVVEQDVDEDTVVEQ-
A8WMS1/16-173              YCLIHTVNNILQKKEFDATKMDEICYGMNESKWFNPHRSWIGTGNYDANILIAALQKHNLKVVWFDKRLGVEKIKFEKLRAIVFNIPSRTLLTL------YRGRHWFAVVQK-NEKFYNLDSKLSAPTVIAEIANFTKNHVDSGDSEVMLVVEQDVDEDTVVEKI
#=GC scorecons             495594596679645943436696943547499999979566599995966769943365454999492433573363536465945651446400000033479996736305439597999732946934523555133643445735564434532222200
#=GC scorecons_70          _*__*__*_****__*____***_*____*_********_*__****_****_**________***_*_____*________*_*__*____*__________******_*_____*_******__*_**___________*_____*___*_____________
#=GC scorecons_80          _*__*__*___*___*______*_*______********____****_*__*_**________***_*________________*___________________***_*_______*_******__*__*___________________________________
#=GC scorecons_90          _*__*__*___*___*______*_*______******_*____****_*____**________***_*________________*___________________***_________*_*_***___*__*___________________________________
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