# STOCKHOLM 1.0
#=GF ID 3.90.70.10/FF/000319
#=GF DE Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
#=GF AC 3.90.70.10/FF/000319
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.072
#=GS O60139/211-575  AC O60139
#=GS O60139/211-575  OS Schizosaccharomyces pombe 972h-
#=GS O60139/211-575  DE Probable ubiquitin carboxyl-terminal hydrolase 4
#=GS O60139/211-575  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O60139/211-575  DR GO; GO:0004843; GO:0005515; GO:0005737; GO:0005768; GO:0016579; GO:0032153; GO:0035871; GO:0036459; GO:0071108; 
#=GS O60139/211-575  DR EC; 3.4.19.12; 
#=GS A2DBX3/137-432  AC A2DBX3
#=GS A2DBX3/137-432  OS Trichomonas vaginalis
#=GS A2DBX3/137-432  DE Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
#=GS A2DBX3/137-432  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2H8W2/31-297   AC A2H8W2
#=GS A2H8W2/31-297   OS Trichomonas vaginalis
#=GS A2H8W2/31-297   DE Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
#=GS A2H8W2/31-297   DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2G3R7/166-466  AC A2G3R7
#=GS A2G3R7/166-466  OS Trichomonas vaginalis
#=GS A2G3R7/166-466  DE Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
#=GS A2G3R7/166-466  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2DE25/175-475  AC A2DE25
#=GS A2DE25/175-475  OS Trichomonas vaginalis
#=GS A2DE25/175-475  DE Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
#=GS A2DE25/175-475  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GF SQ 5
O60139/211-575          NPKKVDSSLSYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQG-----RGLLQNIN-TKNPLGTGGKITSAFFSLL-QSVLLNHGQRSISPRNFLEIVQSLNRDFSIDGQCDAQEFLNFFLDKLHEDLNSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHLRSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVVSLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKIS----VMGRKKIDTPLGLSLQIPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQLENGHYISDVLFNNEWCHIDDSIVRTVGGITDLREDFSSSYILFYKRSSL--
A2DBX3/137-432          --------LPKQ-RTPLPLQNLGNTCWLNSILQCF-----MAHPLIEKWFLSDKYKLDDID---TPIAAV-------HKMLYKMMLATNGRGSFSISDFLFCINALYPDLSSTEQKDSQEFFMRLRTSLDDFYQQKF----------------ESHDFGDIFNWR--------------FHI--VES---CEFCDQTQTHIDPESMLIIPI---ATSNSLEEAISQFLSGE-----SPMTCQSCGHSAKKQYFFH--TLPQTLSICLVR--TTNESRNIANIKIQEILDLD------RFVEPELKRTI--DGAKYSLISTVVRPKTGDLGHFWANVKRNGRWFTCNDITIKSIDVQDVLKEDV---YILFYIRNGFVS
A2H8W2/31-297           -----KSGLMAR-----GLHNLGNSCWMNSSLQLL-----SRLPLLP----------DEVNGSKAPLAQA-------FKYL-STDLKNSGH-AIKPGQFVSALLARLPFLSVTEQQDAYEFFTLFFDSLRDEMGGNA----------------KDLSGNDIENVKKIDTTTIDKSV---SFI--LDSEMRCETCNSVTHIYQRTTAISLCV-PYGASTTLGEVLDSYFSES--SSGDDWKCDTCGNTTRCAIIPHIATTPQFLILHLARFRFGNNGFIKNNIKVELPLEIS---HN--------------LKTKVSFKERITPFSLFIS-QKTSIFRIKLSSI-----------------------------------
A2G3R7/166-466          -----KSGLMAR-----GLHNLGNSCWMNSSLQLL-----SRLPLLP----------DEVNGSKAPLAQA-------FKYL-STDLKNSGH-AIKPGQFVSALLARLPFLSVTEQQDAYEFFTLFFDSLRDEMGGNA----------------KDLSGNDIENVKKIDTTTIDKSV---SFI--LDSEMRCETCNSVTHIYQRTTAISLCV-PYGASTTLGEVLDSYFSES--SSGDDWKCDTCGNTTRCAIIPHIATTPQFFILHLARFRFRNNGFIKNNIKVELPLEISLDKYG--------------IDEKYSLFGFVTHYGTMESGHYTSVYHDKTGFVYFDDESVSSIAEQEALNIQP---YIIIYKLDVH--
A2DE25/175-475          -----KSGLMAR-----GLHNLGNSCWMNSSLQLL-----SRLPLLP----------DEVNGSKAPLAQA-------FKYL-STDLKNSGH-AIKPGQFVSALLARLPFLSVTEQQDAYEFFTLFFDSLRDEMGGNA----------------KDLSGNDIENVKKIDTTTIDKSV---SFI--LDSEMRCETCNSVTHIYQRTTAISLCV-PYGASTTLGEVLDSYFSES--SSGDDWKCDTCGNTTRCAIIPHIATTPQFLILHLARFRFGNNGFIKNNIKVELPLEISLDKYG--------------IDEKYSLFGFVTHYGTMESGHYTSVYHDKTGFVYFDDESVSSIAEQEALNIQP---YIIIYKLDVH--
#=GC scorecons          000002429334000105949999596696499460000033396630000000001656612449663400000006539034393649505645449533536435369456939649964363559473434650000000000000000545424662635221222234430003670063922395594354434343645454602244545949363373634002226354934953444332435425496475546394333422143465965359556210120001010000010032366673336344432435743624315233321351242342122152231000553352221200
#=GC scorecons_70       ________*_________*_****_*_***_**_*________***_____________**____***____________*____*_*_*________*_____*____**__**_**_***__*___*_*____*__________________________*__________________*__*_*___*__*__________*_____*________*_*_*__*_*___________*__*_______________**_*___*_*_____________**___*_________________________*_**___*_________*__*____________________________________________
#=GC scorecons_80       ________*_________*_****_*__*__**__________*_____________________*______________*____*___*________*___________*___*_*__**_______*_*__________________________________________________*____*___*__*_________________________*_*__________________*__*_______________*__*_____*_____________*____*____________________________*_____________*_______________________________________________
#=GC scorecons_90       ________*_________*_****_*__*__**__________*_____________________*______________*____*___*________*___________*___*_*__**_______*_________________________________________________________*___*__*_________________________*_*__________________*__*_______________*________*_____________*____*__________________________________________________________________________________________
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