# STOCKHOLM 1.0
#=GF ID 3.90.70.10/FF/000199
#=GF DE Cysteine proteinases superfamily protein
#=GF AC 3.90.70.10/FF/000199
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 71.824
#=GS A0A3L6G4K4/24-349  AC A0A3L6G4K4
#=GS A0A3L6G4K4/24-349  OS Zea mays
#=GS A0A3L6G4K4/24-349  DE Fruit bromelain
#=GS A0A3L6G4K4/24-349  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1IIB6/43-391      AC I1IIB6
#=GS I1IIB6/43-391      OS Brachypodium distachyon
#=GS I1IIB6/43-391      DE Uncharacterized protein
#=GS I1IIB6/43-391      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS B7ZXQ3/24-349      AC B7ZXQ3
#=GS B7ZXQ3/24-349      OS Zea mays
#=GS B7ZXQ3/24-349      DE Cysteine proteinases superfamily protein
#=GS B7ZXQ3/24-349      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6NUQ6/33-365  AC A0A1D6NUQ6
#=GS A0A1D6NUQ6/33-365  OS Zea mays
#=GS A0A1D6NUQ6/33-365  DE Cysteine proteinases superfamily protein
#=GS A0A1D6NUQ6/33-365  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A3L6DFF1/29-356  AC A0A3L6DFF1
#=GS A0A3L6DFF1/29-356  OS Zea mays
#=GS A0A3L6DFF1/29-356  DE Fruit bromelain
#=GS A0A3L6DFF1/29-356  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6NUP6/29-356  AC A0A1D6NUP6
#=GS A0A1D6NUP6/29-356  OS Zea mays
#=GS A0A1D6NUP6/29-356  DE Thiol protease SEN102
#=GS A0A1D6NUP6/29-356  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS B6SKL1/29-356      AC B6SKL1
#=GS B6SKL1/29-356      OS Zea mays
#=GS B6SKL1/29-356      DE Thiol protease SEN102
#=GS B6SKL1/29-356      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS K7VRR0/1-298       AC K7VRR0
#=GS K7VRR0/1-298       OS Zea mays
#=GS K7VRR0/1-298       DE Cysteine proteinases superfamily protein
#=GS K7VRR0/1-298       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS B4FS65/19-374      AC B4FS65
#=GS B4FS65/19-374      OS Zea mays
#=GS B4FS65/19-374      DE Cysteine proteinases superfamily protein
#=GS B4FS65/19-374      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1ISV5/35-377      AC I1ISV5
#=GS I1ISV5/35-377      OS Brachypodium distachyon
#=GS I1ISV5/35-377      DE Uncharacterized protein
#=GS I1ISV5/35-377      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GF SQ 10
A0A3L6G4K4/24-349          ------------------DDIVPIHIPLLDRFQAWQAEYNRTYATPEEFQQRFMVYSENVKFIETMN--Q--PGSSYELGENQFADLTEEEFKDTYLMKLD--------NVASSPEA-----MALT-VDTMNR-----------AGTSGGSNTNEAPNSVDWRTKGAVTPVKSQQHCGSCWAFAAVASI--EGVHKIKTGRLVSLSEQEIVDCDRG----GNNHGCHGGHSSSAMEWVTRNGGLTTESDYPYVGRQGQCMSDKLGHHAAKIRGRQAVQGKNEGALQHAVAGRPVAVSINAS-RAFQFYKRGIFSGPCNTTR-NHAVTVVGYGANAS----GHKYWIVKNSWGERWGEKGYVRMQRGVRAR-EGVCGIAIAPFYAVM
I1IIB6/43-391              IH------------SDYSGRDKHNDLLMMGRFQGWMAAQGRSYWTAEETARRFEVYKSNVRYIEAVNAEAATTGLTFELGEGPFTDLTHEEFSALYNGSMPPPEEEEGDDIQEEDEQ-----VIATVVDGVDV------NVAVHTNLSAGGPRPWPPRSRDWRKHGAVTPIKDQGRCGSCWAFPTVATI--EGKHKIVRGNLVSLSEQQLIDCD------YTNSGCKGGFVIRAYRWIRKIGGLTTSSAYPYKGARGKCM--KRRRAAARIAGWRSVRSRSEVALVNAVAGQPVAVYISASGKNFQHYKKGILNGPCDTARLNHAVTVVGYGRQAD---TGAKYWIVKNSWGTTWGQEGYILMKRGTRNP-RGQCGIATSPVFPLM
B7ZXQ3/24-349              ------------------DDIVPIHIPLLDRFQAWQAEYNRTYATPEEFQQRFMVYSENVKFIETMN--Q--PGSSYELGENQFADLTEEEFKDTYLMKLD--------NVASSPEA-----MALT-VDTMNR-----------AGTSGGSNTNEAPNSVDWRTKGAVTPVKSQQHCGSCWAFAAVASI--EGVHKIKTGRLVSLSEQEIVDCDRG----GNNHGCHGGHSSSAMEWVTRNGGLTTESDYPYVGRQGQCMSDKLGHHAAKIRGRQAVQGKNEGALQHAVAGRPVAVSINAS-RAFQFYKRGIFSGPCNTTR-NHAVTVVGYGANAS----GHKYWIVKNSWGERWGEKGYVRMQRGVRAR-EGVCGIAIAPFYAVM
A0A1D6NUQ6/33-365          ------------------------AIPLLERFKAWQAEYNRTYATPEEFQQRFMVYSENLRFIKTMN--QLSTGSSYELGENQFTDLTEEEFKDTYLMKLD--------EQPPAAEA-----MPPI-VGTMST-----------AGMSNGDNTGEAPNSVDWRTKGAVTPVKNQQQCGKVWVLMLLLGVCNGGVHRRCAPDKDRSSGVPVGARDRGLRPWGNDHGCRGGYPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHHAARIRGYQAVQRKNEAELERAVAGRPVAVVIDAS-RAFQFYKRGVFSGPCNTTTVNHAVTVVGYGSAGSDSGGGRKYWIVKNSWGQRWGENGYVRMARRVRAR-EGMCAIAIEPYYPVM
A0A3L6DFF1/29-356          ----------------------TIAIPLLERFKAWQAEYNRTYATPEEFQQRFMIYSENVRFIKTMN--QLSTGSSYELGENQFTDLTEEEFKDTYLMKLD--------EQPPAAEA-----MPPT-VGTMST-----------AGMSNGNNTGEAPNSVDWRTKGAVTRVKDQQQCGSCWAFATVASI--EGVHQIKTGRLVSLSEQEIVDCDRG----GNDNGCRGGSPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHHAARIRGYQAVQRNNEAELERAVAGQPVAVFVDAS-RAFQFYKSGVFSGPCDTTTVNHVVTVVGYGSTGSDS-GGRKYWIVKNSWGQGWGENGYVRMARRVRAR-EGMCAIAIEPYYPVM
A0A1D6NUP6/29-356          ----------------------TIAIPLLERFKAWQAEYNRTYATPEEFQQRFMIYSENVRFIKTMN--QLSTGSSYELGENQFTDLTEEEFKDTYLMKLD--------EQPPAAEA-----MPPT-VGTMST-----------AGMSNGNNTGEAPNSVDWRTKGAVTRVKDQQQCGSCWAFATVASI--EGVHQIKTGRLVSLSEQEIVDCDRG----GNDNGCRGGSPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHHAARIRGYQAVQRNNEAELERAVAGQPVAVFVDAS-RAFQFYKSGVFSGPCDTTTVNHVVTVVGYGSTGSDS-GGRKYWIVKNSWGQGWGENGYVRMARRVRAR-EGMCAIAIEPYYPVM
B6SKL1/29-356              ----------------------TIAIPLLERFKAWQAEYNRTYATPEEFQQRFMIYSENVRFIKTMN--QLSTGSSYELGENQFTDLTEEEFKDTYLMKLD--------EQPPAAEA-----MGPT-VGTMST-----------AGMSNGNNTGEAPNSVDWRTKGAVTRVKDQQQCGSCWAFATVASI--EGVHQIKTGRLVSLSEQEIVDCDRG----GNDNGCRGGSPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHHAARIRGYQAVQRNNEAELERAVAERPVAVFIDAS-RAFQFYKSGVFSGPCDTTTVNHVVTVVGYGSTGSDS-GGRKYWIVKNSWGQGWGENGYVRMARRVRAR-EGMCAIAIEPYYPVM
K7VRR0/1-298               -----------------------------------------------------MVYSENVRFIKTMN--QLSTGSSYELGENQFTDLTEEEFKDTYLMKLD--------EQPPAAEA-----MPPT-VGTMST-----------AGMSNGDNTGEAPNSVDWRTKGAVTPVKNQQQCGSCWAFATVASI--EGVHQIKTGRLVSLSEQQIVDCDRG----GNDHGCHGGYPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHQAARIRGYQAVQRKNEAELERAVAGRPVAVVIDAS-RAFQFYKRGVFSGPCNTTTVNHAVTVVGYGSTGSDSGGGRKYWIVKNSWGQRWGENGYVRMARRVRAR-EGMCAIAIEPYYPVM
B4FS65/19-374              FHHGCSSARAHRRAGDMERSMSTDDSSMIERFQRWKAAYNKSYATVAEERRRFRVCARNMAYIEATNAEAEAAGLTYELGETAYTDLTNQEFMAMYTAPAP--------AQLPADES-----VITTRAGPVDAVGGAPGQLPVYVNLSTS-----APASVDWRASGAVTPVKNQGRCGSCWAFSTVAVV--EGIYQIRTGKLVSLSEQELVDCD------TLDDGCDGGISYRALRWIASNGGITTETDYPYTGTTDACNRAKLSHNAVSIAGLRRVATRSEASLANAVAGQPVAVSIEAGGDNFQHYKKGVYNGPCGT-NLNHGVTVVGYGQEAA---GGDRYWIVKNSWGQGWGDDGYIRMKKDVAGKPEGLCGIAIRPSYPLM
I1ISV5/35-377              -------------TTAFEETDPTILQTMAPRFQRWKAEHGRAYATRDEELRRLRVYARNVRYIEAANGDP-AAGLTYQLGETAYTDLTADEFTAMYTSPSP--------VLSAHDDEAAGAMMITTRAGAVDA-----GGQQVYFNVSTAG----APASVDWRAKGAVTEVKNQGRCGSCWAFSTVAVV--EGIHQIRTGNLISLSEQELVDCD------TLDYGCDGGVSYHALEWIASNGGIATEADYPYTGKDGACVANKLPLHAAAISGFARVATRSEPSLANAVAAQPVAVSIEAGGANFQHYVKGVYNGPCGT-RLNHGVTVVGYGEEEG---DGEKYWIVKNSWGKKWGDGGYFRMKKDVAGKPEGLCGIAIRPSFPLV
#=GC scorecons             00000000000000000010103223354377537474546475734723576477549667966590051359568799954779994699455944445000000004434448400000644706656540000000001045494633322795969995599995795955997797846874700795867467476779775667792200004464994993434956975569967976799949444595439645597594935495456944935999669999385961559959659766999593449959999999335511039389999999995499649966947476550794969973947767
#=GC scorecons_70          ______________________________**__*_*___*_*_*__*___*__**__**_**_*_*______*__*****__*****_***___*___________________*______*__*_**_*________________*_*_____**_*****__****_**_*__*******_***_*__**_*_*_**_*******__****________*_**_**____*__**__************_*____*___**___**_*_*___*____*__*__*********_*_**___**_**_***_***_*___**_*******________*_**********__**__**_**_*_*____**_*_***_*_****
#=GC scorecons_80          ______________________________**__*_*_____*_*__*___*__**__*__**___*______*__*****__*****__**___*___________________*_________*_____________________*_______**_*_***__****_**_*__*******__**____**_*_*__*_*_*****___***__________**_**____*__*____**_**___***_*____*___*____**_*_*___*____*__*__***__****_*_*____**_*__**__***_*___**_*******________*_**********__**__**__*_*_*____**_*_***_*_**_*
#=GC scorecons_90          __________________________________________________________*___*___*______*__*_***____***__**___*___________________________________________________*________*_*_***__****__*_*__**__*___________*____________*_______*__________**_**____*__*____**__*___***_*____*___*____*__*_*___*____*__*__***__****___*____**_*__*___***_*___**_*******________*__*********__**__**__*_________*_*_**__*_____
//