# STOCKHOLM 1.0
#=GF ID 3.90.70.10/FF/000194
#=GF DE Ubiquitin C-terminal hydrolase
#=GF AC 3.90.70.10/FF/000194
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 58.961
#=GS A3RNH9/152-379_434-565_630-668  AC A3RNH9
#=GS A3RNH9/152-379_434-565_630-668  OS Neurospora crassa OR74A
#=GS A3RNH9/152-379_434-565_630-668  DE Ubiquitin C-terminal hydrolase
#=GS A3RNH9/152-379_434-565_630-668  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS A7EE59/150-359_420-583          AC A7EE59
#=GS A7EE59/150-359_420-583          OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A7EE59/150-359_420-583          DE Uncharacterized protein
#=GS A7EE59/150-359_420-583          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS B0Y256/140-354_428-601          AC B0Y256
#=GS B0Y256/140-354_428-601          OS Aspergillus fumigatus A1163
#=GS B0Y256/140-354_428-601          DE Ubiquitin C-terminal hydrolase, putative
#=GS B0Y256/140-354_428-601          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS F8MCQ1/152-379_434-565_609-647  AC F8MCQ1
#=GS F8MCQ1/152-379_434-565_609-647  OS Neurospora tetrasperma FGSC 2508
#=GS F8MCQ1/152-379_434-565_609-647  DE Uncharacterized protein
#=GS F8MCQ1/152-379_434-565_609-647  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A1D9Q748/150-359_420-583      AC A0A1D9Q748
#=GS A0A1D9Q748/150-359_420-583      OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A0A1D9Q748/150-359_420-583      DE Uncharacterized protein
#=GS A0A1D9Q748/150-359_420-583      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS G4UHI9/152-379_434-565_609-647  AC G4UHI9
#=GS G4UHI9/152-379_434-565_609-647  OS Neurospora tetrasperma FGSC 2509
#=GS G4UHI9/152-379_434-565_609-647  DE Cysteine proteinase
#=GS G4UHI9/152-379_434-565_609-647  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS Q871P4/152-379_434-565_630-668  AC Q871P4
#=GS Q871P4/152-379_434-565_630-668  OS Neurospora crassa
#=GS Q871P4/152-379_434-565_630-668  DE Cysteine proteinase
#=GS Q871P4/152-379_434-565_630-668  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS Q4WVX2/140-354_428-601          AC Q4WVX2
#=GS Q4WVX2/140-354_428-601          OS Aspergillus fumigatus Af293
#=GS Q4WVX2/140-354_428-601          DE Ubiquitin C-terminal hydrolase, putative
#=GS Q4WVX2/140-354_428-601          DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A229Y1I8/33-247_321-494       AC A0A229Y1I8
#=GS A0A229Y1I8/33-247_321-494       OS Aspergillus fumigatus
#=GS A0A229Y1I8/33-247_321-494       DE Uncharacterized protein
#=GS A0A229Y1I8/33-247_321-494       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A0J5Q614/33-247_321-494       AC A0A0J5Q614
#=GS A0A0J5Q614/33-247_321-494       OS Aspergillus fumigatus Z5
#=GS A0A0J5Q614/33-247_321-494       DE Ubiquitin C-terminal hydrolase
#=GS A0A0J5Q614/33-247_321-494       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GF SQ 10
A3RNH9/152-379_434-565_630-668          KNSTSDRPAGLGNNDNSCYQNSILQGLASLQGLPEYLAR------VSQLGSNAKSTMPTTQAMAGLIATLNDKANYGRSVWPPNVLKNMSTWQQQDAQEYFSKLLDQIDREVAKATATYKKSLAYDGDPPPDDGVSSH-HSDDSGYHSSSQSSSVPDIQLSRNPLEGLIAQRVVCVKCNHFEGLTMIPFNCLTLNLGSGQLGYDLYERLDYNARVEFIEGVHCPRCSLLKMQQKITKQTAISRPPKSLVIHINRSVFDERTGYMYKDSSAVRFPSILDLGPWCLGSAKKRADLEGSNGVLPSSTSNGEQTAEDEEKWNVEPTASMVAGSQRPSALSGPLYELRAVVTHQGRHDSGHYVCYRKHYI---------S---------PTSQWWRLSDTDVFKVDEENVLERGDVFMLFYECVEPEMV----
A7EE59/150-359_420-583                  --GDDETPPGLGNWDNSCYQNSILQGLASLDTLPGFLESFRINDALRQDGS--KHDIKMANALKELITTLKNQSNNGRRIWTPATLKNMSSWQQQDAQEYFSGLLGAIDKE-YGATVKLGGVLGLEQAN----------ISEDAGKNLSHAQA------LSPNPLTGLTATRVVCTKCGYSEGLKATPSLCQPLIVGEG-WEYDLSQLLHEGTKLEFVHGVYCERCTLRKSE---SKQDIIARPPKSLALHLNRSTYGPD-GELSKKTAAIRFPKYLDLGPYCLGSARGNSE-------------------DDSEEWLLAPYASMVAGLQQKSRIQGPLYELRAVITHSGRHENGHYICYRKHPI---------SGIRMDEDGNKKDQWWRLSDDHVMKISEENVLAQGGVFMLFYDQIESAVHLSPT
B0Y256/140-354_428-601                  ---KNHLPPGLGNWDNSCYQNSIIQGLASLLSLAEFLEH-----NIRTLGD--KGSFSTHQALRGVIERLNNADNHDQRLWIPAELKSMSSWQQQDAQEYFSKVVGQVDHEVQQATKRRTRNLGLKMAGPVENIIGAEPHTDVDG--ADSSSPRLAERHLTRNPLEGLLAQRVGCMKCGWTEGLSLIPFNCLTVPLG-GQYEYDVRQCLDQYMHLEPIEGVECAKCTLK------SRQAVIARTPKCLVIHINRSMFDENTGMLRKNYAAVRFPNVLDLNEWCLGTK---------------SSSWGQ---MDIERWGTDPRESMLPEAGSASDVPGRFFELRAVVTHYGRHENGHYICYRKYPSDVFPAHVPDTVLEADGEKDKAERWFRLSDDDVQMVSEASVMSQGGAFMLFYEAIDRQGS--DY
F8MCQ1/152-379_434-565_609-647          KNSTSDRPAGLGNNDNSCYQNSILQGLASLQGLPEYLAR------VSQLGSNAKSTMPTTQAMAGLIATLNDKANYGRSVWPPNVLKNMSTWQQQDAQEYFSKLLDQIDREVAKATATYKKSLAYDGDLPQDDGVSSH-HSDDSGYHSSSQSSSVPDIQLSRNPLEGLIAQRVVCVKCNHFEGLTMIPFNCLTLNLGSGQLGYDLYERLDYNARVEFIEGVHCPRCSLLKMQQKITKQTAISRPPKSLVIHINRSVFDERTGYMYKDSSAVRFPSILDLGPWCLGSAKKRADLEGSNGVLPSSTSNGEQTAEDEEKWNVEPTASMVAGSQRPSALSGPLYELRAVVTHQGRHDSGHYVCYRKHYV---------S---------PTSQWWRLSDTDVFKVDEENVLERGDVFMLFYECVEPEMV----
A0A1D9Q748/150-359_420-583              --GDDETPPGLGNWDNSCYQNSILQGLASLDTLPGFLESFRINDALRQDGS--KHDIKMANALKELITTLKNQSNNGRRIWTPATLKNMSSWQQQDAQEYFSGLLGAIDKE-YGATVKLGGVLGLEQAN----------ISEDAGKNLSHAQA------LSPNPLTGLTATRVVCTKCGYSEGLKATPSLCQPLIVGEG-WEYDLSQLLHEGTKLEFVHGVYCERCTLRKSE---SKQDIIARPPKSLALHLNRSTYGPD-GELSKKTAAIRFPKYLDLGPYCLGSARGNSE-------------------DDSEEWLLAPYASMVAGLQQKSRIQGPLYELRAVITHSGRHENGHYICYRKHPI---------SGIRMDEDGNKKDQWWRLSDDHVMKISEENVLAQGGVFMLFYDQIESAVHLSPT
G4UHI9/152-379_434-565_609-647          KNSTSDRPAGLGNNDNSCYQNSILQGLASLQGLPEYLAR------VSQLGSNAKSTMPTTQAMAGLIATLNDKANYGRSVWPPNVLKNMSTWQQQDAQEYFSKLLDQIDREVAKATATYKKSLAYDGDLPQDDGVSSH-HSDDSGYHSSSQSSSVPDIQLSRNPLEGLIAQRVVCVKCNHFEGLTMIPFNCLTLNLGSGQLGYDLYERLDYNARVEFIEGVHCPRCSLLKMQQKITKQTAISRPPKSLVIHINRSVFDERTGYMYKDSSAVRFPSILDLGPWCLGSAKKRADLEGSNGVLPSSTSNGEQTAEDEEKWNVEPTASMVAGSQRPSALSGPLYELRAVVTHQGRHDSGHYVCYRKHYV---------S---------PTSQWWRLSDTDVFKVDEENVLERGDVFMLFYECVEPEMV----
Q871P4/152-379_434-565_630-668          KNSTSDRPAGLGNNDNSCYQNSILQGLASLQGLPEYLAR------VSQLGSNAKSTMPTTQAMAGLIATLNDKANYGRSVWPPNVLKNMSTWQQQDAQEYFSKLLDQIDREVAKATATYKKSLAYDGDPPPDDGVSSH-HSDDSGYHSSSQSSSVPDIQLSRNPLEGLIAQRVVCVKCNHFEGLTMIPFNCLTLNLGSGQLGYDLYERLDYNARVEFIEGVHCPRCSLLKMQQKITKQTAISRPPKSLVIHINRSVFDERTGYMYKDSSAVRFPSILDLGPWCLGSAKKRADLEGSNGVLPSSTSNGEQTAEDEEKWNVEPTASMVAGSQRPSALSGPLYELRAVVTHQGRHDSGHYVCYRKHYI---------S---------PTSQWWRLSDTDVFKVDEENVLERGDVFMLFYECVEPEMV----
Q4WVX2/140-354_428-601                  ---KNHLPPGLGNWDNSCYQNSIIQGLASLLSLAEFLEH-----NIRTLGD--KGSFSTHQALRGVIERLNNADNHDQRLWIPAELKSMSSWQQQDAQEYFSKVVGQVDHEVQQATKRRTRNLGLKMAGPVENIIGAEPHTDVDG--ADSSSPRLAERHLTRNPLEGLLAQRVGCMKCGWTEGLSLIPFNCLTVPLG-GQYEYDVRQCLDQYMHLEPIEGVECAKCTLK------SRQAVIARTPKCLVIHINRSMFDENTGMLRKNYAAVRFPNVLDLNEWCLGTK---------------SSSWGQ---MDIERWGTDPRESMLPEAGSASDVPGRFFELRAVVTHYGRHENGHYICYRKYPSDVFPAHVPDTVLEADGEKDKAERWFRLSDDDVQMVSEASVMSQGGAFMLFYEAIDRQGS--DY
A0A229Y1I8/33-247_321-494               ---KNHLPPGLGNWDNSCYQNSIIQGLASLLSLAEFLEH-----NIRTLGD--KGSFSTHQALRGVIERLNNADNHDQRLWIPAELKSMSSWQQQDAQEYFSKVVGQVDHEVQQATKRRTRNLGLKMAGPVENIIGAEPHTDVDG--ADSSSPRLAERHLTRNPLEGLLAQRVGCMKCGWTEGLSLIPFNCLTVPLG-GQYEYDVRQCLDQYMHLEPIEGVECAKCTLK------SRQAVIARTPKCLVIHINRSMFDENTGMLRKNYAAVRFPNVLDLNEWCLGTK---------------SSSWGQ---MDIERWGTDPRESMLPEAGSASDVPGRFFELRAVVTHYGRHENGHYICYRKYPSDVFPAHVPDTVLEADGEKDKAERWFRLSDDDVQMVSEASVMSQGGAFMLFYEAIDRQGS--DY
A0A0J5Q614/33-247_321-494               ---KNHLPPGLGNWDNSCYQNSIIQGLASLLSLAEFLEH-----NIRTLGD--KGSFSTHQALRGVIERLNNADNHDQRLWIPAELKSMSSWQQQDAQEYFSKVVGQVDHEVQQATKRRTRNLGLKMAGPVENIIGAEPHTDVDG--ADSSSPRLAERHLTRNPLEGLLAQRVGCMKCGWTEGLSLIPFNCLTVPLG-GQYEYDVRQCLDQYMHLEPIEGVECAKCTLK------SRQAVIARTPKCLVIHINRSMFDENTGMLRKNYAAVRFPNVLDLNEWCLGTK---------------SSSWGQ---MDIERWGTDPRESMLPEAGSASDVPGRFFELRAVVTHYGRHENGHYICYRKYPSDVFPAHVPDTVLEADGEKDKAERWFRLSDDDVQMVSEASVMSQGGAFMLFYEAIDRQGS--DY
#=GC scorecons                          11245539699994999999999699999934966795400000255559511944446469646694596644956655949549969969999999999966666795943499443454965535342332333315674491245646523332396699969949699594995449994469559566369194469963639643456957699494796943121116794596969969669699947654493639546979994499955699965211221111111111434243111493959345935996664544945495679999979949997699979999744111111111612213221254469599995693575956964696699999737744430011
#=GC scorecons_70                       _______*_****_****************__*_***____________*___*____*_***_***__***__*__*__*_*__**_**_***********_**__**_*___**______*__________________*__*______________*__***_**_*_**_*_**___***__**__*_**_**_*___***_*_**____**_****_*_**_*________**__*_*_**_********_**___*_*_*___*****__***__****___________________________*_*_*___*__***______*___*_**********_****_*********________________________**_****_**__*_*__**_**__******_**________
#=GC scorecons_80                       _______*_****_*********_******__*__**____________*___*_______*____*__*____*_____*_*__**_**_***********______*_*___**______*__________________*__*______________*__***_**_*_**_*_**___***___*__*_____*_*___**____*______*_*_**_*__*_*_________*__*_*_**_*__*_***_*____*___*___*****__***___***___________________________*_*_*___*__**_______*___*__*********_***__***_****__________________________*_****__*__*_*__*___*__******___________
#=GC scorecons_90                       _______*_****_*********_******__*___*____________*___*_______*____*__*____*_____*_*__**_**_***********______*_*___**______*_____________________*______________*__***_**_*_**_*_**___***___*__*_____*_*___**____*______*___**_*__*_*_________*__*_*_**_*__*_***______*___*___*_***__***___***___________________________*_*_*___*__**_______*___*___*****_**_***__***_****__________________________*_****__*____*__*___*__*****____________
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