# STOCKHOLM 1.0 #=GF ID 3.90.70.10/FF/000176 #=GF DE Ubiquitin-specific protease #=GF AC 3.90.70.10/FF/000176 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 70.433 #=GS Q01476/731-819_915-1264 AC Q01476 #=GS Q01476/731-819_915-1264 OS Saccharomyces cerevisiae S288C #=GS Q01476/731-819_915-1264 DE Ubiquitin carboxyl-terminal hydrolase 2 #=GS Q01476/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q01476/731-819_915-1264 DR GO; GO:0004843; GO:0005515; GO:0005737; GO:0010636; GO:0010992; GO:0016579; GO:0043162; #=GS Q01476/731-819_915-1264 DR EC; 3.4.19.12; #=GS A0A1H6Q3X2/606-723_788-1108 AC A0A1H6Q3X2 #=GS A0A1H6Q3X2/606-723_788-1108 OS Yarrowia lipolytica #=GS A0A1H6Q3X2/606-723_788-1108 DE Uncharacterized protein #=GS A0A1H6Q3X2/606-723_788-1108 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS A0A1D8PT66/905-1130_1185-1295 AC A0A1D8PT66 #=GS A0A1D8PT66/905-1130_1185-1295 OS Candida albicans SC5314 #=GS A0A1D8PT66/905-1130_1185-1295 DE Ubiquitin-specific protease #=GS A0A1D8PT66/905-1130_1185-1295 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS Q75CT3/1024-1215_1263-1381 AC Q75CT3 #=GS Q75CT3/1024-1215_1263-1381 OS Eremothecium gossypii ATCC 10895 #=GS Q75CT3/1024-1215_1263-1381 DE ACL164Cp #=GS Q75CT3/1024-1215_1263-1381 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9XI72/1025-1213_1261-1379 AC R9XI72 #=GS R9XI72/1025-1213_1261-1379 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9XI72/1025-1213_1261-1379 DE AaceriACL164Cp #=GS R9XI72/1025-1213_1261-1379 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS A0A0L8VHC9/731-819_915-1264 AC A0A0L8VHC9 #=GS A0A0L8VHC9/731-819_915-1264 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VHC9/731-819_915-1264 DE UBP2p Ubiquitin-specific protease #=GS A0A0L8VHC9/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS B9WM14/898-1126_1181-1292 AC B9WM14 #=GS B9WM14/898-1126_1181-1292 OS Candida dubliniensis CD36 #=GS B9WM14/898-1126_1181-1292 DE Ubiquitin carboxyl-terminal hydrolase, putative #=GS B9WM14/898-1126_1181-1292 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; #=GS N1P355/731-819_915-1264 AC N1P355 #=GS N1P355/731-819_915-1264 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P355/731-819_915-1264 DE Ubp2p #=GS N1P355/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1P355/731-819_915-1264 DR EC; 3.4.19.12; #=GS Q6CAE5/606-723_788-1108 AC Q6CAE5 #=GS Q6CAE5/606-723_788-1108 OS Yarrowia lipolytica CLIB122 #=GS Q6CAE5/606-723_788-1108 DE YALI0D03531p #=GS Q6CAE5/606-723_788-1108 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS A6ZNX1/731-819_915-1264 AC A6ZNX1 #=GS A6ZNX1/731-819_915-1264 OS Saccharomyces cerevisiae YJM789 #=GS A6ZNX1/731-819_915-1264 DE Ubiquitin-specific protease #=GS A6ZNX1/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZI86/731-819_915-1264 AC C8ZI86 #=GS C8ZI86/731-819_915-1264 OS Saccharomyces cerevisiae EC1118 #=GS C8ZI86/731-819_915-1264 DE Ubp2p #=GS C8ZI86/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LJG6/731-819_915-1264 AC B3LJG6 #=GS B3LJG6/731-819_915-1264 OS Saccharomyces cerevisiae RM11-1a #=GS B3LJG6/731-819_915-1264 DE Ubiquitin carboxyl-terminal hydrolase 2 #=GS B3LJG6/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WMZ9/731-819_915-1264 AC G2WMZ9 #=GS G2WMZ9/731-819_915-1264 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WMZ9/731-819_915-1264 DE K7_Ubp2p #=GS G2WMZ9/731-819_915-1264 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GF SQ 13 Q01476/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNRNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I A0A1H6Q3X2/606-723_788-1108 QSTYDWPIGLNNIGNTCYLNSLLQYYFAIKPLREEVLQHDGSNVDVGFKLS-AGEIRDKRIGGRSVSPSEVKRAQEFIHELALLFNDMIYSNQGYVTPRKNLAYLALVSASQEDEHAETGRQQDVTECIENVLFQLEAAVKGDSVDSDGEQDDLVKRLFYGQTKQVLQPVNTNDASKRREKTERFLSLLVDVADGPRDLYDALDSYFGHDLVSLSD--GDVIRSLTIGKLPPMLQIQVQRVQFDRDLGRPFKSLAVLKFDEVIYMDRYIDTDDDEVNAKRMEVFKWREERRQLLKDLEGFNAKVENSG-----TLTENLKLTEQWLLT---LKSDVSR-VLNLVREEIATRTSRQEAMEADLAELDFKIQSQFAHMKQIGYRIHAVFIHRGEASFGHYWTYIRD-HQGGFFRKYNDEKITRVEDSEVMDFDDNNTATPYFLVFVREDLIDS-M A0A1D8PT66/905-1130_1185-1295 -ET----------------------------------DVDESNKNYSMAVE-----------SPSSSRSMIEDEVE------TPDTSSSEDDVVGSSPK-----ILPISSDQIESTIEVGRQQDVTECIENVTYQIETALPPQLIDKDGEQHDLIKQLFCGKTKQTITPLDKPD-EPPRVSLERFFSLIINVSDHPKSIYDALDYYFNEDVVKLDE--GLVKKSITISELPQILQFHVQRVLFDREKLMAYKSIEPIPFSDKIYLDRYLDTDDEEILYKRNQVFEW--------------------------------------------------------TINDEIRKLTSNLEDIDNRLNELNHLISIQFQDYKSIAYNIFAVFIHRGEASYGHYWVYIKDPHNNNIFRKYNDEIVTEVPASEIFNFLETNTATPYYIVYIKEELESSYI Q75CT3/1024-1215_1263-1381 SPE---------------------------------------------------------------------------------------AEGPETSTY-----VAKISSDQLENTLEIGRQQDVTECIGNVLYQIESASVPLSLDEEGEQFDLVKQLFYGKLKQELIPLEFPD--RKRTKIERFMSLLVNIGDHPKDIYDALDSYFKDDLLTLDEDDGKVRRSVAVAELPIMLQIQIQRVYYDREKFMPFKSTEPLPFGEKLYMDRYLATDNAELNAKKQQAIGLQEQYHATTSHLDALRV-----------------------------------------------ALDEELAALDAHIASVQDAIAHRFDAFSSYGYSLGAVFIHRGEASYGHYWVYIKDCQNGGIWRKYNDESVTEVPESEVFDFSEENTATPYFLVYVKEAHELD-I R9XI72/1025-1213_1261-1379 ------------------------------------------------------------------------------------------AEGPTTSTC-----VAKISSDQLENTLEIGRQQDVTECIGNVLYQIESASVPLSLDEEGEQFDLVKQLFYGKLKQELIPLDVPD--RKRTKIERFMSLLVNIGDHPKDIYDALDSYFKDDLLTLDEDDGKVRRSVAVAELPVMLQIQIQRVYYDREKFMPFKSTEPLPFGEKLYMDRYLATDDPDMNAKKQQTLCLQEQYHATSSHLDALRA-----------------------------------------------ALDEELASLDAHIASVQDAITHQFDAFSSYGYSLGAVFIHRGEASYGHYWVYIKDCQNGGIWRKYNDESVTEVPESEVFDFSEENTATPYFLVYVKEGHELD-I A0A0L8VHC9/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNRNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I B9WM14/898-1126_1181-1292 IET----------------------------------ESNENNKDYSLVVE-SSQ-------SPRSSRSIIEDEIE------TPDATSSDDDEVGSSPR-----ILPISSDQIESTIEVGRQQDVTECIENVTYQIETALPPQLIDKDGEQYDLIKQLFCGKTKQTIVPLDKPD-DPPRISLERFFSLIINVSDHPKSIYDALDYYFNEDVVKLDE--GLVKKSITISELPQILQFHVQRVLFDREKLMAYKSIEPIPFSDKIYLDRYLDTQDEEILYKRNQVFEQ--------------------------------------------------------TINDEIKKLTSNLQDIDNRLNELNHLINIQFQDYKSIAYNIFAVFIHRGEASYGHYWVYIKDPHNNNIFRKYNDEIVTEVPASEIFNFLETNTATPYYIVYIKEELESSYI N1P355/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNRNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I Q6CAE5/606-723_788-1108 QSTYDWPIGLNNIGNTCYLNSLLQYYFAIKPLREEVLQHDGSNVDVGFKLS-AGEIRDKRIGGRSVSPSEVKRAQEFIHELALLFNDMIYSNQGYVTPRKNLAYLALVSASQEDEHAETGRQQDVTECIENVLFQLEAAVKGDSVDSDGEQDDLVKRLFYGQTKQVLQPVNTNDASKRREKTERFLSLLVDVADGPRDLYDALDSYFGHDLVSLSD--GDVIRSLTIGKLPPMLQIQVQRVQFDRDLGRPFKSLAVLKFDEVIYMDRYIDTDDDEVNAKRMEVFKWREERRQLLKDLEGFNAKVENSG-----TLTENLKLTEQWLLT---LKSDVSR-VLNLVREEIATRTSRQEAMEADLAELDFKIQSQFAHMKQIGYRIHAVFIHRGEASFGHYWTYIRD-HQGGFFRKYNDEKITRVEDSEVMDFDDNNTATPYFLVFVREDLIDS-M A6ZNX1/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNHNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I C8ZI86/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIVPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNRNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I B3LJG6/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNRNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I G2WMZ9/731-819_915-1264 PEN--WPTGINNIGNTCYLNSLLQYYFSIAPLRRYVLEYQKTVENFNDHLSNSGHIR--RIGGREISRGEVERSIQFIYQLRNLFYAMVHTRELTSPTR-----VAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPIRYDEDNEQYDLVKQLFYGTTKQSIVPLSATN--KVRTKVERFLSLLINIGDHPKDIYDAFDSYFKDEYLTMEE-YGDVIRTVAVTTFPTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRYADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSR-DDSGLTRKDAFLESIKLLESDTIKKTPLKIEAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKEYGYSLFSVFIHRGEASYGHYWIYIKDRNHNGIWRKYNDETISEVQEEEVFNFNEGNTATPYFLVYVKQGQEGD-I #=GC scorecons 244002212222222222222222222121222112232323323332243123222002224323533344323322222123322333444335565000006647976947545959999999999699679795643634495759959979799794699364974356005394649995997777596976799969699557465657019494766674469369957799947997546779956676947479799946966445469746534333323232333324232022221111122121222121112111122121111221333334244545634645565575349448955564579564699999999979999599792545665999999476694559766937499999977977765463507 #=GC scorecons_70 ________________________________________________________________________________________________________**_*****_*___*_**********_*******____*___*_*_**_*********_***_*_**___*____*_*_***_******_**************__*_*_*_*__*_*_*_***__**_***_*****_****__*****__****_*_******_****_____**_*________________________________________________________________________*______*__*___*__**___*__**_*__**************_****____**_******_*_**___*****_*_*************__*___* #=GC scorecons_80 ___________________________________________________________________________________________________________**__*_*___*_**********_**_****________*_*_**_*********__**___**________*___***_***_*__*_**_****_*_**________*__*_*_*_______*__**_*_***_****____***___*_*_*_******__*_______*_____________________________________________________________________________________*___*__**_______*____**************_****_______******____*___**__*_*_************_______* #=GC scorecons_90 ____________________________________________________________________________________________________________*__*_____*_**********_**__*_*________*___**_**_*_**_*__**___*_________*___***_**_____*_*___***_*_**___________*_*_________*__**___***__**______**_____*____*_***__*_______*_________________________________________________________________________________________*___*_______*____*********_****_**_*_______******____*___*___*___******__*___________ //