# STOCKHOLM 1.0
#=GF ID 3.90.260.10/FF/000016
#=GF DE DNA repair protein RAD4
#=GF AC 3.90.260.10/FF/000016
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 59.354
#=GS A0A2K1IMK6/436-658  AC A0A2K1IMK6
#=GS A0A2K1IMK6/436-658  OS Physcomitrella patens
#=GS A0A2K1IMK6/436-658  DE Uncharacterized protein
#=GS A0A2K1IMK6/436-658  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9RJ60/181-407      AC A9RJ60
#=GS A9RJ60/181-407      OS Physcomitrella patens
#=GS A9RJ60/181-407      DE Predicted protein
#=GS A9RJ60/181-407      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS Q7EY71/320-559      AC Q7EY71
#=GS Q7EY71/320-559      OS Oryza sativa Japonica Group
#=GS Q7EY71/320-559      DE Os08g0427500 protein
#=GS Q7EY71/320-559      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A1D6KPG6/297-552  AC A0A1D6KPG6
#=GS A0A1D6KPG6/297-552  OS Zea mays
#=GS A0A1D6KPG6/297-552  DE DNA repair protein RAD4
#=GS A0A1D6KPG6/297-552  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1QIT6/320-559      AC I1QIT6
#=GS I1QIT6/320-559      OS Oryza glaberrima
#=GS I1QIT6/320-559      DE Uncharacterized protein
#=GS I1QIT6/320-559      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0E0QJ90/63-313   AC A0A0E0QJ90
#=GS A0A0E0QJ90/63-313   OS Oryza rufipogon
#=GS A0A0E0QJ90/63-313   DE Uncharacterized protein
#=GS A0A0E0QJ90/63-313   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0E0AVI9/63-313   AC A0A0E0AVI9
#=GS A0A0E0AVI9/63-313   OS Oryza glumipatula
#=GS A0A0E0AVI9/63-313   DE Uncharacterized protein
#=GS A0A0E0AVI9/63-313   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GF SQ 7
A0A2K1IMK6/436-658          ------------------IDDESPLG-AGAISKTTPAKKGRRRTKADNNVKQEES--------------PQTVRRNS---KRKGDEEFEAQLAMALAATAAAAKAE--ATQTSPASNGKEESS--VKELCWSQRRDSTESNGGKSKLFEFGAKGVSSGSVWSWKMGPVLHWAEIYCGGEGSTGRWVHVDATRGIVDGAAQVEGQTAACRSPLRYVVAFAGAGAKDVTRRYVSLWSSVEPLRVDSEWWESTMLPLKQLEAAATS--------------
A9RJ60/181-407              --------QVSTNTSRKNIDDESPLG-AGAISKTTPAKKGRRRTKADNNVKQEES--------------PQTVRRNS---KRKGDEEFEAQLAMALAATAAAAKAE--ATQTSPASNGKEESS--VKELCWSQRRDS-----------------VSSGSVWSWKMGPVLHWAEIYCGGEGSTGRWVHVDATRGIVDGAAQVEGQTAACRSPLRYVVAFAGAGAKDVTRRYVSLWSSVEPLRVDSEWWESTMLPLKQLEAAATSGPSDMELDTKL---
Q7EY71/320-559              -----------QNNTEGSINTTP------KQVKVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSS-NAEVPRRKGDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSLLSSTPPLKKLRKSEEASS------------------NSSVVWSRNR-APLFWAEVFCGGEASSGRWVHVDVANDIIDGEQKVEAASAVCRKPLRYVVAFAGNGAKDVTRRYCLQWHRIVQGRVNPEWWKSVLAPLERLELAATNNTEEMELQTRALTE
A0A1D6KPG6/297-552          ---VISSPALLKDNSQGSASMNQQTGDLGKLKQTSACKRSLYKTLSSIKSDHESSCASTSKDKSSSNQFPSTSSNNAEVLKRKGDVEFELQLEMALSATAAETQNNKLATHMNQLTVSLQDSSSPLKKLRQNVEALS------------------SSSAVWSRSAGAPLYWAEVYCGGQASTGRWVHVDVVNNLIDAEQNVEASSAVCKKPLRYVIAFAGNGAKDVTRRYCLQWHRIAQGRVNSEWWDNVLAPLKQMELAATNNYEDMELQTRALTE
I1QIT6/320-559              -----------QNNTEGSINTTP------KQVKVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSS-NAEVPRRKGDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSLLNSTPPLKKLRKSEEASS------------------NSSVVWSRNR-APLFWAEVFCGGEALSGRWVHVDVANDIIDGEQKVEAASAVCRKPLRYVVAFAGNGAKDVTRRYCLQWHRIVQGRVNPEWWKSVLAPLERLELAATNNTEEMELQTRALTE
A0A0E0QJ90/63-313           NEYNNLSPVLSQNNTEGSINTTP------KQVKVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSS-NAEVPRRKGDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSLLSSTPPLKKLRKSEEASS------------------NSSVVWSRNR-APLFWAEVFCGGEASSGRWVHVDVANDIIDGEQKVEAASAVCRKPLRYVVAFAGNGAKDVTRRYCLQWHRIVQGRVNPEWWKSVLAPLERLELAATNNTEEMELQTRALTE
A0A0E0AVI9/63-313           NEYNNLSPVLSQNNTEGSINTTP------KQVKVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSS-NAEVPRRKGDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSLLNSTPPLKKLRKSEEASS------------------NSSVVWSRNR-APLFWAEVFCGGEASSGRWVHVDVANDIIDGEQKVEAASAVCRKPLRYVVAFAGNGAKDVTRRYCLQWHRIVQGRVNPEWWKSVLAPLERLELAATNNTEEMELQTRALTE
#=GC scorecons              0000000001124333337544411201253375445675446545435457559222122212222229595519522169999399959959994959945645229974554545434952269595374554900000000000000000059549995432559599967999757599999995555769755599545959759999979999599999999944495564549965999575659956795999532345553543222
#=GC scorecons_70           __________________*_____________*____**___*________*__*______________*_*___*____*****_***_**_***_*_**_______***__________*____*_*__*____*___________________*__***______*_*********_*_*******____****___**___*_**_**********_*********___*__*___**__***_*_*_**__**_***_______________
#=GC scorecons_80           ________________________________*_____*____________*__*______________*_*___*_____****_***_**_***_*_**_______***__________*____*_*__*____*___________________*__***______*_***_*****_*_*******____*_**___**___*_**_**********_*********___*______**__***_*___**__**_***_______________
#=GC scorecons_90           ______________________________________________________*______________*_*___*_____****_***_**_***_*_**_______**___________*____*_*_______*___________________*__***______*_***__***____*******______*____**___*_*__*****_****_*********___*______**__***_____**___*_***_______________
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