# STOCKHOLM 1.0
#=GF ID 3.90.230.10/FF/000026
#=GF DE Intermediate cleaving peptidase 55
#=GF AC 3.90.230.10/FF/000026
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 41.501
#=GS 6a9vA02/202-470     AC P40051
#=GS 6a9vA02/202-470     OS Saccharomyces cerevisiae S288C
#=GS 6a9vA02/202-470     DE Intermediate cleaving peptidase 55
#=GS 6a9vA02/202-470     DR CATH; 6a9v; A:243-498; 
#=GS 6a9vA02/202-470     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6a9vA02/202-470     DR GO; GO:0004177; GO:0005634; GO:0005739; GO:0016485; GO:0031314; GO:0050821; 
#=GS 6a9vA02/202-470     DR EC; 3.4.11.26; 
#=GS Q10439/233-486      AC Q10439
#=GS Q10439/233-486      OS Schizosaccharomyces pombe 972h-
#=GS Q10439/233-486      DE Intermediate cleaving peptidase 55
#=GS Q10439/233-486      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS Q10439/233-486      DR GO; GO:0005739; GO:0007005; GO:0034982; GO:0070006; 
#=GS Q10439/233-486      DR EC; 3.4.11.26; 
#=GS 6a9uA02/187-455     AC P40051
#=GS 6a9uA02/187-455     OS Saccharomyces cerevisiae S288C
#=GS 6a9uA02/187-455     DE Intermediate cleaving peptidase 55
#=GS 6a9uA02/187-455     DR CATH; 6a9u; A:243-498; 
#=GS 6a9uA02/187-455     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6a9uA02/187-455     DR GO; GO:0004177; GO:0005634; GO:0005739; GO:0016485; GO:0031314; GO:0050821; 
#=GS 6a9uA02/187-455     DR EC; 3.4.11.26; 
#=GS 6a9tA02/187-455     AC P40051
#=GS 6a9tA02/187-455     OS Saccharomyces cerevisiae S288C
#=GS 6a9tA02/187-455     DE Intermediate cleaving peptidase 55
#=GS 6a9tA02/187-455     DR CATH; 6a9t; A:243-499; 
#=GS 6a9tA02/187-455     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6a9tA02/187-455     DR GO; GO:0004177; GO:0005634; GO:0005739; GO:0016485; GO:0031314; GO:0050821; 
#=GS 6a9tA02/187-455     DR EC; 3.4.11.26; 
#=GS P40051/243-511      AC P40051
#=GS P40051/243-511      OS Saccharomyces cerevisiae S288C
#=GS P40051/243-511      DE Intermediate cleaving peptidase 55
#=GS P40051/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P40051/243-511      DR GO; GO:0004177; GO:0005634; GO:0005739; GO:0016485; GO:0031314; GO:0050821; 
#=GS P40051/243-511      DR EC; 3.4.11.26; 
#=GS A0A0L8VRM1/243-511  AC A0A0L8VRM1
#=GS A0A0L8VRM1/243-511  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VRM1/243-511  DE ICP55p Mitochondrial aminopeptidase
#=GS A0A0L8VRM1/243-511  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8VRM1/243-511  DR EC; 3.4.11.26; 
#=GS J6EGT8/243-511      AC J6EGT8
#=GS J6EGT8/243-511      OS Saccharomyces kudriavzevii IFO 1802
#=GS J6EGT8/243-511      DE ICP55-like protein
#=GS J6EGT8/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS J8Q8P7/243-511      AC J8Q8P7
#=GS J8Q8P7/243-511      OS Saccharomyces arboricola H-6
#=GS J8Q8P7/243-511      DE YER078C
#=GS J8Q8P7/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GTX9/243-511      AC H0GTX9
#=GS H0GTX9/243-511      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GTX9/243-511      DE YER078C-like protein
#=GS H0GTX9/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RKL3/242-510  AC A0A0L8RKL3
#=GS A0A0L8RKL3/242-510  OS Saccharomyces eubayanus
#=GS A0A0L8RKL3/242-510  DE ICP55-like protein
#=GS A0A0L8RKL3/242-510  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C7GRR0/243-511      AC C7GRR0
#=GS C7GRR0/243-511      OS Saccharomyces cerevisiae JAY291
#=GS C7GRR0/243-511      DE YER078C-like protein
#=GS C7GRR0/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GRR0/243-511      DR EC; 3.4.11.26; 
#=GS B3LRJ5/243-511      AC B3LRJ5
#=GS B3LRJ5/243-511      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LRJ5/243-511      DE Uncharacterized protein
#=GS B3LRJ5/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LRJ5/243-511      DR EC; 3.4.11.26; 
#=GS C8Z788/243-511      AC C8Z788
#=GS C8Z788/243-511      OS Saccharomyces cerevisiae EC1118
#=GS C8Z788/243-511      DE EC1118_1E8_1970p
#=GS C8Z788/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z788/243-511      DR EC; 3.4.11.26; 
#=GS N1PA46/243-511      AC N1PA46
#=GS N1PA46/243-511      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1PA46/243-511      DE Icp55p
#=GS N1PA46/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GF61/243-511      AC H0GF61
#=GS H0GF61/243-511      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GF61/243-511      DE YER078C-like protein
#=GS H0GF61/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS G2WCW8/243-511      AC G2WCW8
#=GS G2WCW8/243-511      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WCW8/243-511      DE K7_Yer078cp
#=GS G2WCW8/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZR33/243-511      AC A6ZR33
#=GS A6ZR33/243-511      OS Saccharomyces cerevisiae YJM789
#=GS A6ZR33/243-511      DE Conserved protein
#=GS A6ZR33/243-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 17
6a9vA02/202-470             KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
Q10439/233-486              SIKSTAELECMKEAANISSNVYREIMRKRFEKEAEMSAEFNYRFCIGGCDRSAYVPVVAGGKNGLTIHYTINNDIFRPDEMVLVDAGGEFGGYVTDISRTWPINGKFSTVQRDLYQAVLNVQKKCIKYCCTSNGWSLADIHFESVKLMHEELKQVGIHGTKREITDILYPHSIGHEIGLEIHDCSTNNGYQPLRKNQVITIEPGLYVPEEDGWPQWAQGIAIRIEDSVIVGDDKPFVLTSAAPKEIEEIEALKK---------------
6a9uA02/187-455             KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
6a9tA02/187-455             KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
P40051/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
A0A0L8VRM1/243-511          KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
J6EGT8/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFVSGGCDKDAYIPVVATGSNSLCIHYTRNDDVMYDDEMVLVDAAGSLGGYCADISRTWPNNGKFTGAQKELYEAVLNVQRGCIDLCKASNNFSLHDIHEESIRLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKPGQVITIEPGLYIPDDESFPSYFRNIGIRIEDDIAVGEDSYTNLTVEAVKEIDDLENVMQNGVSTKFEEDEVTSL
J8Q8P7/243-511              KIKSPQELRIMRRAGQISGRAFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNNDVMFDDEMVLVDAAGALGGYCSDISRTWPNNGKFTDAQRDLYEAVLNVQRGCIGLCKASNNYSLHDIHEESITLMKQELKNLGIDKVSGWNVERLYPHYIGHNLGLDVHDVPKVSRYEPLKPGQVITIEPGLYIPNDHSFPSYFRSVGIRIEDDIAIGEDSYTNLTVEAVKEIDDLEFVMQNGVSTKFEEDEVAPL
H0GTX9/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFVSGGCDKDAYIPVVATGSNSLCIHYTRNDDVMYDDEMVLVDAAGSLGGYCADISRTWPNNGKFTGAQKELYEAVLNVQRGCIDLCKASNNFSLHDIHEESIRLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKPGQVITIEPGLYIPDDESFPSYFRNIGIRIEDDIAVGEDSYTNLTVEAVKEIDDLENVMQNGVSTKFEEDEVTSL
A0A0L8RKL3/242-510          KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNNDVMYDDEMVLVDAAGSLGGYCADISRTWPNNGKFTGAQRDLYEAVLNVQRGCINLCKASNNYSLHDVHEESISLMKKELKNLGIDKVTGWNVEKLYPHYIGHNLGLDVHDVPKASRYEPLKPGQVITIEPGLYIPDSESFPSYFRNVGIRIEDDIAIGEDSYTNLTIEAVKEIDDLENVMQNGVSTRFEEDEVAPL
C7GRR0/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
B3LRJ5/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
C8Z788/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
N1PA46/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
H0GF61/243-511              KIKSPQELRIMRRAGQISGRSFNQSFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
G2WCW8/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVRQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
A6ZR33/243-511              KIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
#=GC scorecons              59996599559759659965475655599956955656466979459999759979999595969599994969753599999999694699955999999955999646988996999999749965946995599598945974996599956995554545574999959996699779956546596997359999999999795666595546566999995756979445599559599977694656442443444424334
#=GC scorecons_70           _***__**__**_*__**___*_*___***__*__*___*_***__*****_*******_*_*_*_****_*_**___********_*_****__*******__***___*************_**__*_***__**_***__**_**__***_***________*_****_***_*******______*****__************_**__*___*_*_*****_*_****____**__*_*******_*_*_______________
#=GC scorecons_80           _***__**__*__*__**___*_____***__*________*_*__****__**_****_*_*_*_****_*_*____********_*__***__*******__***___*****_******__**__*__**__**_***__*__**__***__**__________****_***__**__**______*_**___**********_*_____*_______*****____*_*____**__*_***___*___________________
#=GC scorecons_90           _***__**__*__*__**_________***__*________*_*__****__**_****_*_*_*_****_*_*____********_*__***__*******__***___*****_******__**__*__**__**_***__*__**__***__**__________****_***__**__**______*_**___**********_*_____*_______*****____*_*____**__*_***___*___________________
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