# STOCKHOLM 1.0
#=GF ID 3.90.1800.10/FF/000008
#=GF DE DNA-directed RNA polymerase subunit beta
#=GF AC 3.90.1800.10/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 66.475
#=GS E3KL26/1059-1223      AC E3KL26
#=GS E3KL26/1059-1223      OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS E3KL26/1059-1223      DE DNA-directed RNA polymerase subunit beta
#=GS E3KL26/1059-1223      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS A0A0D1E5E8/1115-1287  AC A0A0D1E5E8
#=GS A0A0D1E5E8/1115-1287  OS Ustilago maydis 521
#=GS A0A0D1E5E8/1115-1287  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0D1E5E8/1115-1287  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS Q5KEV8/1056-1192      AC Q5KEV8
#=GS Q5KEV8/1056-1192      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KEV8/1056-1192      DE DNA-directed RNA polymerase subunit beta
#=GS Q5KEV8/1056-1192      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0F7RTF0/1115-1285  AC A0A0F7RTF0
#=GS A0A0F7RTF0/1115-1285  OS Sporisorium scitamineum
#=GS A0A0F7RTF0/1115-1285  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0F7RTF0/1115-1285  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS R9P797/1115-1286      AC R9P797
#=GS R9P797/1115-1286      OS Pseudozyma hubeiensis SY62
#=GS R9P797/1115-1286      DE DNA-directed RNA polymerase subunit beta
#=GS R9P797/1115-1286      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS M9MBL9/1110-1280      AC M9MBL9
#=GS M9MBL9/1110-1280      OS Moesziomyces antarcticus T-34
#=GS M9MBL9/1110-1280      DE DNA-directed RNA polymerase subunit beta
#=GS M9MBL9/1110-1280      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS V5EVK7/1115-1289      AC V5EVK7
#=GS V5EVK7/1115-1289      OS Kalmanozyma brasiliensis GHG001
#=GS V5EVK7/1115-1289      DE DNA-directed RNA polymerase subunit beta
#=GS V5EVK7/1115-1289      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; 
#=GS A0A095C5U9/1056-1191  AC A0A095C5U9
#=GS A0A095C5U9/1056-1191  OS Cryptococcus gattii VGII R265
#=GS A0A095C5U9/1056-1191  DE DNA-directed RNA polymerase subunit beta
#=GS A0A095C5U9/1056-1191  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS E6ZTI0/1118-1288      AC E6ZTI0
#=GS E6ZTI0/1118-1288      OS Sporisorium reilianum SRZ2
#=GS E6ZTI0/1118-1288      DE DNA-directed RNA polymerase subunit beta
#=GS E6ZTI0/1118-1288      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS I2G6C2/1115-1287      AC I2G6C2
#=GS I2G6C2/1115-1287      OS Ustilago hordei Uh4857-4
#=GS I2G6C2/1115-1287      DE DNA-directed RNA polymerase subunit beta
#=GS I2G6C2/1115-1287      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS W3VJM7/1110-1280      AC W3VJM7
#=GS W3VJM7/1110-1280      OS Moesziomyces aphidis DSM 70725
#=GS W3VJM7/1110-1280      DE DNA-directed RNA polymerase subunit beta
#=GS W3VJM7/1110-1280      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces aphidis; 
#=GS A0A1K0FZH6/1115-1287  AC A0A1K0FZH6
#=GS A0A1K0FZH6/1115-1287  OS Ustilago bromivora
#=GS A0A1K0FZH6/1115-1287  DE DNA-directed RNA polymerase subunit beta
#=GS A0A1K0FZH6/1115-1287  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; 
#=GS E6R7Q5/1056-1191      AC E6R7Q5
#=GS E6R7Q5/1056-1191      OS Cryptococcus gattii WM276
#=GS E6R7Q5/1056-1191      DE DNA-directed RNA polymerase subunit beta
#=GS E6R7Q5/1056-1191      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A0D0UBR7/1056-1191  AC A0A0D0UBR7
#=GS A0A0D0UBR7/1056-1191  OS Cryptococcus gattii CA1280
#=GS A0A0D0UBR7/1056-1191  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0D0UBR7/1056-1191  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS A0A0D0XEZ9/1056-1191  AC A0A0D0XEZ9
#=GS A0A0D0XEZ9/1056-1191  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0XEZ9/1056-1191  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0D0XEZ9/1056-1191  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS J9VN76/1056-1192      AC J9VN76
#=GS J9VN76/1056-1192      OS Cryptococcus neoformans var. grubii H99
#=GS J9VN76/1056-1192      DE DNA-directed RNA polymerase subunit beta
#=GS J9VN76/1056-1192      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS F5HHB3/1056-1192      AC F5HHB3
#=GS F5HHB3/1056-1192      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS F5HHB3/1056-1192      DE DNA-directed RNA polymerase subunit beta
#=GS F5HHB3/1056-1192      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0D0URP6/1056-1191  AC A0A0D0URP6
#=GS A0A0D0URP6/1056-1191  OS Cryptococcus gattii VGII Ram5
#=GS A0A0D0URP6/1056-1191  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0D0URP6/1056-1191  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A0D0WI26/1056-1191  AC A0A0D0WI26
#=GS A0A0D0WI26/1056-1191  OS Cryptococcus gattii EJB2
#=GS A0A0D0WI26/1056-1191  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0D0WI26/1056-1191  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A225YIR3/1082-1218  AC A0A225YIR3
#=GS A0A225YIR3/1082-1218  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225YIR3/1082-1218  DE DNA-directed RNA polymerase subunit beta
#=GS A0A225YIR3/1082-1218  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A226BGH2/1082-1218  AC A0A226BGH2
#=GS A0A226BGH2/1082-1218  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BGH2/1082-1218  DE DNA-directed RNA polymerase subunit beta
#=GS A0A226BGH2/1082-1218  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A2N8U8X1/1118-1288  AC A0A2N8U8X1
#=GS A0A2N8U8X1/1118-1288  OS Sporisorium reilianum f. sp. reilianum
#=GS A0A2N8U8X1/1118-1288  DE DNA-directed RNA polymerase subunit beta
#=GS A0A2N8U8X1/1118-1288  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GF SQ 22
E3KL26/1059-1223              VDKLTRQPVKGRKRGGGIRFGEMERDALLAHGTSFLLQDRLMNCSDYSTAWICKRCGLLSSLGYDTSDDLGLAPTSQHHQAHQAEPKFSSSVKMRGPRGEYCRQCEPDFPLKAAEHALP--NTQNGQSLE----------SLSGQLTNHMDVIAIPYVFRYLVAELMAMGIKIALQA
A0A0D1E5E8/1115-1287          VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDTSASSR----HGGGAISTIDVTTQGTTPILGPNGEFCRVCRAEDEVRHQQGLEPLRGKRQPIGGVEATIAIPQSNVINSLSGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
Q5KEV8/1056-1192              VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------AQGMQ-------------------EYCRICDGHKHEHAEEM-----SKENGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV
A0A0F7RTF0/1115-1285          VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDSSAS------TQGGAVSSIDMTTQGATPILGPNGEFCRVCRAEDEVRRQQGLEPLRGKRVPVGGVEAHIGIPEANVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
R9P797/1115-1286              VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDTSTSS-----GHGGSISTIDMSTQGTTPILGPNGEFCRVCRAEDEVRRQQGLEPLRGKRQPIGGVEATIGIPQSNVINSLTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
M9MBL9/1110-1280              VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDHSHS------GAGGAMSTIDVTTQGTTPVLGPNGEFCRVCRAEDEVRRQQGLEPLRGKRQPIGGAEATIGIPAHNVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFAL
V5EVK7/1115-1289              VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDTSSSTT--GNGAGGAISTIDVTTQGSTPILGPNGEFCRVCRAEDDVRRQQGLEPLRGKRQPIGGVEAHVSIPHSNVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
A0A095C5U9/1056-1191          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDGHEPEHGEE------SKEKGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV
E6ZTI0/1118-1288              VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDASAA------SHGGAVSSIDRTTQGTTPILGPNGEFCRVCRAEDEVRRQQGLEPLRGKRLPVGGVEAHIGIPHSNVISNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
I2G6C2/1115-1287              VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDNSQSQS----NGGGAITTIDITTQGTTPILGPNGEYCRVCRAEDEVRRQQGLEPLRGKRMPVGGVEGYIGISQSNVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
W3VJM7/1110-1280              VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDHSHS------GAGGAMSTIDVTTQGTTPVLGPNGEFCRVCRAEDEVRRQQGLEPLRGKRQPIGGAEATIGIPAHNVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFAL
A0A1K0FZH6/1115-1287          VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDNSQSQS----NGGGAISTIDITTQGTTPILGPNGEYCRVCRAEDEVRRQQGLEPLRGKRVPVGGVEGHIDIPQSNVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
E6R7Q5/1056-1191              VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDGHEPEHGEE------SKENGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV
A0A0D0UBR7/1056-1191          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMR-------------------EYCRICDGHEPEHGEE------SKETGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV
A0A0D0XEZ9/1056-1191          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDGHEPEHGKE------SKEKGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV
J9VN76/1056-1192              VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDEHKHEHAEEK-----SKEKGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV
F5HHB3/1056-1192              VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------AQGMQ-------------------EYCRICDGHKHEHAEEM-----SKENGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV
A0A0D0URP6/1056-1191          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDGHEPEHGEE------SKEKGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV
A0A0D0WI26/1056-1191          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDGHEPEHGEE------SKENGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV
A0A225YIR3/1082-1218          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRVCDEHKHEQAEEK-----SKEKGVGVV----------MRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV
A0A226BGH2/1082-1218          VDPLTRQPVKGRKRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGG------GQGMQ-------------------EYCRICDEHKHEKAEEK-----SKEKGVGVV----------MCGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV
A0A2N8U8X1/1118-1288          VHALTRQPIKGRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDASAA------SHGGAVSSIDRTTQGTTPILGPNGEFCRVCRAEDEVRRQQGLEPLRGKRLPVGGVEAHIGIPQSNVISNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGV
#=GC scorecons                955999997999998999999999999969999976999999999999965898599795969874545000000557451112211222122112222979969555544545622121158535684711111111115455445856998689996799599685999765557
#=GC scorecons_70             *__**********************************************__***_****_*****____________*_____________________******_________*_______*___**_*_________________*_****_********_****_*****___*
#=GC scorecons_80             *__*****_*******************_******_*************__***_****_*_**_____________*_____________________****_*_________________*____*___________________*__***_****__**_**_*_****____*
#=GC scorecons_90             *__*****_*******************_*****__*************__***_**_*_*_**___________________________________*_**_*______________________*___________________*__***_****__**_**___***______
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