# STOCKHOLM 1.0
#=GF ID 3.90.1800.10/FF/000010
#=GF DE DNA-directed RNA polymerase subunit beta
#=GF AC 3.90.1800.10/FF/000010
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 49.033
#=GS Q27493/992-1118       AC Q27493
#=GS Q27493/992-1118       OS Caenorhabditis elegans
#=GS Q27493/992-1118       DE DNA-directed RNA polymerase subunit beta
#=GS Q27493/992-1118       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q27493/992-1118       DR GO; GO:0005730; 
#=GS A9VCU6/1018-1132      AC A9VCU6
#=GS A9VCU6/1018-1132      OS Monosiga brevicollis
#=GS A9VCU6/1018-1132      DE DNA-directed RNA polymerase subunit beta
#=GS A9VCU6/1018-1132      DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS A0A2G5VMP6/29-158     AC A0A2G5VMP6
#=GS A0A2G5VMP6/29-158     OS Caenorhabditis nigoni
#=GS A0A2G5VMP6/29-158     DE Uncharacterized protein
#=GS A0A2G5VMP6/29-158     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XVM2/1029-1158      AC A8XVM2
#=GS A8XVM2/1029-1158      OS Caenorhabditis briggsae
#=GS A8XVM2/1029-1158      DE DNA-directed RNA polymerase subunit beta
#=GS A8XVM2/1029-1158      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS G0MLX0/993-1119       AC G0MLX0
#=GS G0MLX0/993-1119       OS Caenorhabditis brenneri
#=GS G0MLX0/993-1119       DE DNA-directed RNA polymerase subunit beta
#=GS G0MLX0/993-1119       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A2H2IAD5/992-1121   AC A0A2H2IAD5
#=GS A0A2H2IAD5/992-1121   OS Caenorhabditis japonica
#=GS A0A2H2IAD5/992-1121   DE DNA-directed RNA polymerase subunit beta
#=GS A0A2H2IAD5/992-1121   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS E3MFI3/992-1118       AC E3MFI3
#=GS E3MFI3/992-1118       OS Caenorhabditis remanei
#=GS E3MFI3/992-1118       DE DNA-directed RNA polymerase subunit beta
#=GS E3MFI3/992-1118       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A261CBM7/992-1118   AC A0A261CBM7
#=GS A0A261CBM7/992-1118   OS Caenorhabditis latens
#=GS A0A261CBM7/992-1118   DE DNA-directed RNA polymerase subunit beta
#=GS A0A261CBM7/992-1118   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5VN78/993-1122   AC A0A2G5VN78
#=GS A0A2G5VN78/993-1122   OS Caenorhabditis nigoni
#=GS A0A2G5VN78/993-1122   DE DNA-directed RNA polymerase subunit beta
#=GS A0A2G5VN78/993-1122   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5VND2/1004-1133  AC A0A2G5VND2
#=GS A0A2G5VND2/1004-1133  OS Caenorhabditis nigoni
#=GS A0A2G5VND2/1004-1133  DE DNA-directed RNA polymerase subunit beta
#=GS A0A2G5VND2/1004-1133  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS G0PGG1/917-1043       AC G0PGG1
#=GS G0PGG1/917-1043       OS Caenorhabditis brenneri
#=GS G0PGG1/917-1043       DE DNA-directed RNA polymerase subunit beta
#=GS G0PGG1/917-1043       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GF SQ 11
Q27493/992-1118               IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSSRAGSHLLKKKRK---DDEPLDYTETQRCRTCDKDDQVFLLQVPRVFRYLTAELAAMNVKIKLGI-
A9VCU6/1018-1132              VNSLTRQPVKGRKKNGGIRFGEMERDALLGHGTAFLLQDRLFNCSDRSEVDVCRKCGSLLSPYSSEKTAANRIR----------------VLRCRGCSDGGEVVRVNLPYVFRYLTAELSAMNIRLSLDVA
A0A2G5VMP6/29-158             IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSNKKQSFANKRRFHEENENAQLDYSETQRCRTCDRDDQVFLLQVPRVFRYLTAELAAMNVKIKLGI-
A8XVM2/1029-1158              IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSNKKQSFANKRRFHEENEDAQLDYTETQRCRTCDRDDQVFLLQVPRVFRFLTAELAAMNVKIKLGI-
G0MLX0/993-1119               IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSNKQSHIVRKKKTN---DNEPIDYTETQQCRTCGREDQVYLLQVPRVFRYLTAELAAMNVKIKLGI-
A0A2H2IAD5/992-1121           IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDLAYACRRCGSLLSVLMSSRAGSHLLKKKKNNLDDNEPIDYTETQRCRTCFQDDQVYLLQVPRVFRYLTAELAAMNVKIKLGI-
E3MFI3/992-1118               IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSSKAGAHLMKKKRS---DNEPLDYTESQRCRTCDKDDQVYLLQVPRVFRYLTAELAAMNVKIKLGI-
A0A261CBM7/992-1118           IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSSKAGAHLMKKKRS---DNEPLDYTETQRCRTCDKDDQVYLLQVPRVFRYLTAELAAMNVKIKLGI-
A0A2G5VN78/993-1122           IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSNKKQSFANKRRFHEENENAQLDYSETQRCRTCDRDDQVFLLQVPRVFRYLTAELAAMNVKIKLGI-
A0A2G5VND2/1004-1133          IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSNKKQSFANKRRFHEENENAQLDYSETQRCRTCDRDDQVFLLQVPRVFRYLTAELAAMNVKIKLGI-
G0PGG1/917-1043               IDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSNKQSHIVRKKKTN---DNEPIDYTETQQCRTCGREDQVYLLQVPRVFRYLTAELAAMNVKIKLGI-
#=GC scorecons                76669699999999699999999999966699969699999699999656569979999996669473343337441200044333553555799694456695566695999899999699977669670
#=GC scorecons_70             ************************************************_*_**********___*_*______*__________________*****___***__****_****************_***_
#=GC scorecons_80             *___*_********_************___***_*_*****_*****_____*********___*_*______*__________________***_*_____*_____*_*********_*****__*_*_
#=GC scorecons_90             ____*_********_************___***_*_*****_*****_____**_******___*____________________________**_*_____*_____*_*********_***____*___
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