# STOCKHOLM 1.0
#=GF ID 3.90.1600.10/FF/000019
#=GF DE DNA polymerase
#=GF AC 3.90.1600.10/FF/000019
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 71.134
#=GS Q9U0H1/1068-1168      AC Q9U0H1
#=GS Q9U0H1/1068-1168      OS Plasmodium falciparum 3D7
#=GS Q9U0H1/1068-1168      DE DNA polymerase
#=GS Q9U0H1/1068-1168      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q9U0H1/1068-1168      DR GO; GO:0003887; GO:0008408; 
#=GS A8BCF5/579-649        AC A8BCF5
#=GS A8BCF5/579-649        OS Giardia lamblia ATCC 50803
#=GS A8BCF5/579-649        DE DNA polymerase
#=GS A8BCF5/579-649        DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0DPB2/525-594        AC A0DPB2
#=GS A0DPB2/525-594        OS Paramecium tetraurelia
#=GS A0DPB2/525-594        DE Uncharacterized protein
#=GS A0DPB2/525-594        DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A0A060RTG6/1063-1165  AC A0A060RTG6
#=GS A0A060RTG6/1063-1165  OS Plasmodium reichenowi
#=GS A0A060RTG6/1063-1165  DE DNA polymerase
#=GS A0A060RTG6/1063-1165  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A2I0C020/1068-1168  AC A0A2I0C020
#=GS A0A2I0C020/1068-1168  OS Plasmodium falciparum NF54
#=GS A0A2I0C020/1068-1168  DE DNA polymerase
#=GS A0A2I0C020/1068-1168  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J5R8/1064-1164      AC W4J5R8
#=GS W4J5R8/1064-1164      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J5R8/1064-1164      DE DNA polymerase
#=GS W4J5R8/1064-1164      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FC22/1071-1171      AC W7FC22
#=GS W7FC22/1071-1171      OS Plasmodium falciparum 7G8
#=GS W7FC22/1071-1171      DE DNA polymerase
#=GS W7FC22/1071-1171      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IMD8/1024-1124      AC W4IMD8
#=GS W4IMD8/1024-1124      OS Plasmodium falciparum NF135/5.C10
#=GS W4IMD8/1024-1124      DE DNA polymerase
#=GS W4IMD8/1024-1124      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I8X4/1070-1170  AC A0A0L1I8X4
#=GS A0A0L1I8X4/1070-1170  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I8X4/1070-1170  DE DNA polymerase
#=GS A0A0L1I8X4/1070-1170  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VGC1/990-1090   AC A0A024VGC1
#=GS A0A024VGC1/990-1090   OS Plasmodium falciparum FCH/4
#=GS A0A024VGC1/990-1090   DE DNA polymerase
#=GS A0A024VGC1/990-1090   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CWX8/961-1061   AC A0A0L0CWX8
#=GS A0A0L0CWX8/961-1061   OS Plasmodium falciparum RAJ116
#=GS A0A0L0CWX8/961-1061   DE DNA polymerase
#=GS A0A0L0CWX8/961-1061   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M7E4/1057-1157  AC A0A0L7M7E4
#=GS A0A0L7M7E4/1057-1157  OS Plasmodium falciparum Dd2
#=GS A0A0L7M7E4/1057-1157  DE DNA polymerase
#=GS A0A0L7M7E4/1057-1157  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7G140/1019-1119      AC W7G140
#=GS W7G140/1019-1119      OS Plasmodium falciparum Santa Lucia
#=GS W7G140/1019-1119      DE DNA polymerase
#=GS W7G140/1019-1119      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7KEQ5/1077-1177  AC A0A0L7KEQ5
#=GS A0A0L7KEQ5/1077-1177  OS Plasmodium falciparum HB3
#=GS A0A0L7KEQ5/1077-1177  DE DNA polymerase
#=GS A0A0L7KEQ5/1077-1177  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K0T3/1030-1130      AC W7K0T3
#=GS W7K0T3/1030-1130      OS Plasmodium falciparum NF54
#=GS W7K0T3/1030-1130      DE DNA polymerase
#=GS W7K0T3/1030-1130      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024XF62/1083-1183  AC A0A024XF62
#=GS A0A024XF62/1083-1183  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024XF62/1083-1183  DE DNA polymerase
#=GS A0A024XF62/1083-1183  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K3K7/1078-1178      AC W7K3K7
#=GS W7K3K7/1078-1178      OS Plasmodium falciparum UGT5.1
#=GS W7K3K7/1078-1178      DE DNA polymerase
#=GS W7K3K7/1078-1178      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VBK5/1055-1155  AC A0A024VBK5
#=GS A0A024VBK5/1055-1155  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024VBK5/1055-1155  DE DNA polymerase
#=GS A0A024VBK5/1055-1155  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WCI2/1025-1125  AC A0A024WCI2
#=GS A0A024WCI2/1025-1125  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024WCI2/1025-1125  DE DNA polymerase
#=GS A0A024WCI2/1025-1125  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q9BHN0/1011-1111      AC Q9BHN0
#=GS Q9BHN0/1011-1111      OS Plasmodium falciparum
#=GS Q9BHN0/1011-1111      DE DNA polymerase
#=GS Q9BHN0/1011-1111      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WXH0/144-243    AC A0A024WXH0
#=GS A0A024WXH0/144-243    OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WXH0/144-243    DE DNA polymerase
#=GS A0A024WXH0/144-243    DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 21
Q9U0H1/1068-1168              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A8BCF5/579-649                --------------SLEGATVLNPKRGFYSDKQPIATLDFNSLYPTIIIAHNLCYSTM-ISDAPDMDFLVQTYANSQGKELSSEAA--------------------
A0DPB2/525-594                ----------------KGALVLEPKKGFY--KIPLALFDFVSLYPSIIIAYNMCYTTI-IKDY-SIKLNENDY------HIIPEFG---HKFVKQHIKK-------
A0A060RTG6/1063-1165          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-NVSIEDNKLNTKRNGNINNDYEKNVHSDAEKNVHSDAEKNIH
A0A2I0C020/1068-1168          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
W4J5R8/1064-1164              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
W7FC22/1071-1171              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
W4IMD8/1024-1124              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A0L1I8X4/1070-1170          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A024VGC1/990-1090           KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A0L0CWX8/961-1061           KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A0L7M7E4/1057-1157          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
W7G140/1019-1119              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A0L7KEQ5/1077-1177          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
W7K0T3/1030-1130              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A024XF62/1083-1183          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
W7K3K7/1078-1178              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A024VBK5/1055-1155          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A024WCI2/1025-1125          KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
Q9BHN0/1011-1111              KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDKN--
A0A024WXH0/144-243            KKIETNQMKNKNTAKYLGGLVLDPLCGYY--DTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNC-DVSIEDNKLNTKKNGNINNDYEKNIHSDAEKNIHSDDDK---
#=GC scorecons                2222222222222233395699594497900544553799699996999579597695266640654534645333333564464422253233334332222200
#=GC scorecons_70             _________________*__**_*__***________***_********_**_****_____________*_________*__*______________________
#=GC scorecons_80             _________________*__**_*__***_________**_****_***_**_**_*_________________________________________________
#=GC scorecons_90             _________________*__**_*__*_*_________**_****_***__*_*__*_________________________________________________
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