# STOCKHOLM 1.0
#=GF ID 3.90.1010.10/FF/000009
#=GF DE FeS cluster assembly scaffold protein NifU
#=GF AC 3.90.1010.10/FF/000009
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 74.783
#=GS O67045/1-138      AC O67045
#=GS O67045/1-138      OS Aquifex aeolicus VF5
#=GS O67045/1-138      DE Iron-sulfur cluster assembly scaffold protein IscU
#=GS O67045/1-138      DR ORG; Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Aquifex; Aquifex aeolicus; 
#=GS Q8RH54/6-128      AC Q8RH54
#=GS Q8RH54/6-128      OS Fusobacterium nucleatum subsp. nucleatum ATCC 25586
#=GS Q8RH54/6-128      DE NifU protein
#=GS Q8RH54/6-128      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; 
#=GS Q8TKX8/1-125      AC Q8TKX8
#=GS Q8TKX8/1-125      OS Methanosarcina acetivorans C2A
#=GS Q8TKX8/1-125      DE Nitrogen fixation protein
#=GS Q8TKX8/1-125      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; 
#=GS A5I4Z8/1-141      AC A5I4Z8
#=GS A5I4Z8/1-141      OS Clostridium botulinum A str. Hall
#=GS A5I4Z8/1-141      DE Uncharacterized protein
#=GS A5I4Z8/1-141      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS Q8TME1/3-126      AC Q8TME1
#=GS Q8TME1/3-126      OS Methanosarcina acetivorans C2A
#=GS Q8TME1/3-126      DE NifU protein
#=GS Q8TME1/3-126      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; 
#=GS W0DD91/1-137      AC W0DD91
#=GS W0DD91/1-137      OS Thermocrinis ruber
#=GS W0DD91/1-137      DE FeS cluster assembly scaffold IscU
#=GS W0DD91/1-137      DR ORG; Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Thermocrinis; Thermocrinis ruber; 
#=GS A8UYJ7/1-138      AC A8UYJ7
#=GS A8UYJ7/1-138      OS Hydrogenivirga sp. 128-5-R1-1
#=GS A8UYJ7/1-138      DE NifU protein
#=GS A8UYJ7/1-138      DR ORG; Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga; Hydrogenivirga sp. 128-5-R1-1; 
#=GS X8I3L5/3-128      AC X8I3L5
#=GS X8I3L5/3-128      OS Fusobacterium sp. OBRC1
#=GS X8I3L5/3-128      DE Fe-S iron-sulfur cluster assembly protein, NifU family
#=GS X8I3L5/3-128      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium sp. OBRC1; 
#=GS A0A1F0E0L0/3-128  AC A0A1F0E0L0
#=GS A0A1F0E0L0/3-128  OS Fusobacterium sp. HMSC064B11
#=GS A0A1F0E0L0/3-128  DE Iron-sulfur cluster assembly scaffold protein
#=GS A0A1F0E0L0/3-128  DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium sp. HMSC064B11; 
#=GS A0A1V9IMY7/1-141  AC A0A1V9IMY7
#=GS A0A1V9IMY7/1-141  OS Clostridium sporogenes
#=GS A0A1V9IMY7/1-141  DE FeS cluster assembly scaffold protein NifS
#=GS A0A1V9IMY7/1-141  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sporogenes; 
#=GS A0A2G7HEP6/1-141  AC A0A2G7HEP6
#=GS A0A2G7HEP6/1-141  OS Clostridium combesii
#=GS A0A2G7HEP6/1-141  DE Fe-S cluster assembly scaffold protein NifU
#=GS A0A2G7HEP6/1-141  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium combesii; 
#=GS A0A161XHY5/1-142  AC A0A161XHY5
#=GS A0A161XHY5/1-142  OS Clostridium magnum DSM 2767
#=GS A0A161XHY5/1-142  DE Iron-sulfur cluster assembly scaffold protein IscU
#=GS A0A161XHY5/1-142  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium magnum; 
#=GS F9EMB2/3-125      AC F9EMB2
#=GS F9EMB2/3-125      OS Fusobacterium nucleatum subsp. animalis ATCC 51191
#=GS F9EMB2/3-125      DE FeS cluster assembly scaffold IscU
#=GS F9EMB2/3-125      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. animalis; 
#=GS A5TSP5/3-128      AC A5TSP5
#=GS A5TSP5/3-128      OS Fusobacterium nucleatum subsp. polymorphum ATCC 10953
#=GS A5TSP5/3-128      DE [Fe-S] cluster formation protein NifU
#=GS A5TSP5/3-128      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. polymorphum; 
#=GS A0A323TWR5/3-128  AC A0A323TWR5
#=GS A0A323TWR5/3-128  OS Fusobacterium nucleatum
#=GS A0A323TWR5/3-128  DE Fe-S cluster assembly scaffold protein NifU
#=GS A0A323TWR5/3-128  DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; 
#=GS D5RE19/6-128      AC D5RE19
#=GS D5RE19/6-128      OS Fusobacterium nucleatum subsp. nucleatum ATCC 23726
#=GS D5RE19/6-128      DE Fe-S iron-sulfur cluster assembly protein, NifU family
#=GS D5RE19/6-128      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; 
#=GS A0A0D6H2X2/3-128  AC A0A0D6H2X2
#=GS A0A0D6H2X2/3-128  OS Fusobacterium nucleatum subsp. polymorphum
#=GS A0A0D6H2X2/3-128  DE Iron-sulfur cluster assembly scaffold protein
#=GS A0A0D6H2X2/3-128  DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. polymorphum; 
#=GS U7TRZ9/3-128      AC U7TRZ9
#=GS U7TRZ9/3-128      OS Fusobacterium nucleatum CTI-6
#=GS U7TRZ9/3-128      DE FeS cluster assembly scaffold protein NifU
#=GS U7TRZ9/3-128      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; 
#=GS X7RWZ2/3-128      AC X7RWZ2
#=GS X7RWZ2/3-128      OS Fusobacterium nucleatum 13_3C
#=GS X7RWZ2/3-128      DE FeS cluster assembly scaffold protein NifU
#=GS X7RWZ2/3-128      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; 
#=GS A0A175M7A8/1-141  AC A0A175M7A8
#=GS A0A175M7A8/1-141  OS Clostridium botulinum B2 433
#=GS A0A175M7A8/1-141  DE Nitrogen fixation protein NifU
#=GS A0A175M7A8/1-141  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS B1KXC0/1-141      AC B1KXC0
#=GS B1KXC0/1-141      OS Clostridium botulinum A3 str. Loch Maree
#=GS B1KXC0/1-141      DE FeS cluster assembly scaffold protein NifU
#=GS B1KXC0/1-141      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS M1ZPB5/1-141      AC M1ZPB5
#=GS M1ZPB5/1-141      OS Clostridium botulinum CFSAN001627
#=GS M1ZPB5/1-141      DE FeS cluster assembly scaffold protein NifU
#=GS M1ZPB5/1-141      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS C1FTC3/1-141      AC C1FTC3
#=GS C1FTC3/1-141      OS Clostridium botulinum A2 str. Kyoto
#=GS C1FTC3/1-141      DE FeS cluster assembly scaffold protein NifU
#=GS C1FTC3/1-141      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0E1QFT8/1-141  AC A0A0E1QFT8
#=GS A0A0E1QFT8/1-141  OS Clostridium botulinum
#=GS A0A0E1QFT8/1-141  DE FeS cluster assembly scaffold protein NifU
#=GS A0A0E1QFT8/1-141  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A396T8Z8/1-141  AC A0A396T8Z8
#=GS A0A396T8Z8/1-141  OS Clostridium botulinum
#=GS A0A396T8Z8/1-141  DE Fe-S cluster assembly scaffold protein NifU
#=GS A0A396T8Z8/1-141  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A7GGF4/1-141      AC A7GGF4
#=GS A7GGF4/1-141      OS Clostridium botulinum F str. Langeland
#=GS A7GGF4/1-141      DE FeS cluster assembly scaffold protein NifU
#=GS A7GGF4/1-141      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS B1IJH0/1-141      AC B1IJH0
#=GS B1IJH0/1-141      OS Clostridium botulinum B1 str. Okra
#=GS B1IJH0/1-141      DE FeS cluster assembly scaffold protein NifU
#=GS B1IJH0/1-141      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GF SQ 27
O67045/1-138              MSFEYNEKVLDHFLNPRNVGVLEDANGVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKDYLMKQGRVEEASKIPDC---------
Q8RH54/6-128              ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DNNIISDVKFRTFGCASAIASSSISTDMIIGKTVEEALKLTNKQVVDELGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGK------------------
Q8TKX8/1-125              M---YNKKVMDHFMNPRNVGEIEDADGIGEAGNPH-GDQMKIFLKI--RDNRIEDVKFKTFGCAAAIASSSMATELIKGKTLEEAWELTNEDVAEALEGLPPGKLECSVVSREATHMAINDYRKKQGLEPL----------------
A5I4Z8/1-141              M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
Q8TME1/3-126              ----YSAKVLDHFSNPRNMGSIANCDGVGEVGNAKCGDIMKIFLKV--EGDRIVDVKFQTFGCGAAIASSSMATELIKGKILKEAWELSNKAVAEALDGLPPIKMHCSMLAEEAIHEAINDYLQKKGLEP-----------------
W0DD91/1-137              M-FEYSEKVLDHFLNPRNVGVLEDANGIGQCGNPACGDAMLFTIKVNPETDVIEDVRFKTFGCGSAIAVSSQLTEMVKGKTIDYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKDYLIKQGRLEEAEKIPDC---------
A8UYJ7/1-138              MSFEYNEKVLDHFLNPRNVGVLEDANGVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSQLTEMIKGKDINYALNLTYKDIFDELGGLPPQKIHCTNLGLETLHVAIKDYLMKQGREEEAAKIPDC---------
X8I3L5/3-128              ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
A0A1F0E0L0/3-128          ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
A0A1V9IMY7/1-141          M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
A0A2G7HEP6/1-141          M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
A0A161XHY5/1-142          M---YSEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDAKFKTFGCGSAIASSSMATELIIGKTVEEAWELSNKAVAEALDGLPPVKMHCSVLAEEAIHKAINEYRVSKGLEPWEMKTHSDDIHEHVHGD
F9EMB2/3-125              ----YTEKVMQHFMHPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DNDIITDVKFRTFGCASAIASSSISTDMIIGKTVEEALKLTNKQVVDELGGLPAVKMHCSVLAEEAIKMAIEDYLSKRDGK------------------
A5TSP5/3-128              ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
A0A323TWR5/3-128          ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
D5RE19/6-128              ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DNNIISDVKFRTFGCASAIASSSISTDMIIGKTVEEALKLTNKQVVDELGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGK------------------
A0A0D6H2X2/3-128          ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
U7TRZ9/3-128              ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
X7RWZ2/3-128              ----YTEKVMQHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFIKV--DDDKISDVKFRTFGCASAIASSSISTDMIIGKTVDEALQVTNKAVVEALGGLPAVKMHCSVLAEEAIKMAIEDYISKRDGKKAQ---------------
A0A175M7A8/1-141          M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
B1KXC0/1-141              M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
M1ZPB5/1-141              M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
C1FTC3/1-141              M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
A0A0E1QFT8/1-141          M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEAWKMKTHSEHIHEHVHG-
A0A396T8Z8/1-141          M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEPWKMKTHSEHIHEHVHG-
A7GGF4/1-141              M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEPWKMKTHSEHIHEHVHG-
B1IJH0/1-141              M---YTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKV--EDNIIKDVKFKTFGCASAIASSSMATELIKGKTLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEPWKMKTHSEHIHEHVHG-
#=GC scorecons            300096799769948969895786569495699648996947569800666494987969999689997995597685997665955787857576959996597897687697764995794456635323121111111111110
#=GC scorecons_70         ____******_**_******_***_**_*_***__*****_*_***__***_*_*****************__****_***___*__****_*_*_*_****_********_****_**_**___**____________________
#=GC scorecons_80         ____*_****_**_**_***_**___*_*__**__***_*_*__**______*_****_****_****_**__**_*_***___*___*_*_*_*_*_***__*****_*__**___**_**_________________________
#=GC scorecons_90         ____*__**__**_**_***__*___*_*__**__***_*____**______*_**_*_****__***_**__*__*_**____*___*_*_____*_***__*_**__*__*____**__*_________________________
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