# STOCKHOLM 1.0 #=GF ID 3.40.80.10/FF/000013 #=GF DE Autolysin amidase #=GF AC 3.40.80.10/FF/000013 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 52.053 #=GS O33983/70-275 AC O33983 #=GS O33983/70-275 OS Listeria monocytogenes EGD #=GS O33983/70-275 DE Protein Ami #=GS O33983/70-275 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS O33983/70-275 DR GO; GO:0009986; GO:0019835; GO:0044651; #=GS Q9AIS0/321-548 AC Q9AIS0 #=GS Q9AIS0/321-548 OS Staphylococcus caprae #=GS Q9AIS0/321-548 DE Fibronectin binding autolysin #=GS Q9AIS0/321-548 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus caprae; #=GS Q9AIS0/321-548 DR GO; GO:0001968; GO:0051701; #=GS Q8Y496/70-275 AC Q8Y496 #=GS Q8Y496/70-275 OS Listeria monocytogenes EGD-e #=GS Q8Y496/70-275 DE Autolysin, amidase #=GS Q8Y496/70-275 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A0U1E3A9/399-629 AC A0A0U1E3A9 #=GS A0A0U1E3A9/399-629 OS Staphylococcus capitis #=GS A0A0U1E3A9/399-629 DE Bifunctional autolysin #=GS A0A0U1E3A9/399-629 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis; #=GS Q927T5/64-277 AC Q927T5 #=GS Q927T5/64-277 OS Listeria innocua Clip11262 #=GS Q927T5/64-277 DE Autolysin amidase #=GS Q927T5/64-277 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria innocua; #=GS A0ALP4/65-276 AC A0ALP4 #=GS A0ALP4/65-276 OS Listeria welshimeri serovar 6b str. SLCC5334 #=GS A0ALP4/65-276 DE N-acetylmuramoyl-L-alanine amidase, family 2 #=GS A0ALP4/65-276 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria welshimeri; #=GS C5QR57/321-548 AC C5QR57 #=GS C5QR57/321-548 OS Staphylococcus caprae M23864:W1 #=GS C5QR57/321-548 DE Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase #=GS C5QR57/321-548 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus caprae; #=GS Q9EXF2/70-277 AC Q9EXF2 #=GS Q9EXF2/70-277 OS Listeria monocytogenes #=GS Q9EXF2/70-277 DE Ami 4b protein #=GS Q9EXF2/70-277 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A458VGF5/64-277 AC A0A458VGF5 #=GS A0A458VGF5/64-277 OS Listeria monocytogenes #=GS A0A458VGF5/64-277 DE GW domain-containing glycosaminoglycan-binding protein #=GS A0A458VGF5/64-277 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A0E0V042/69-277 AC A0A0E0V042 #=GS A0A0E0V042/69-277 OS Listeria monocytogenes M7 #=GS A0A0E0V042/69-277 DE Autolysin #=GS A0A0E0V042/69-277 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A463GKU2/70-275 AC A0A463GKU2 #=GS A0A463GKU2/70-275 OS Listeria monocytogenes #=GS A0A463GKU2/70-275 DE GW domain-containing glycosaminoglycan-binding protein #=GS A0A463GKU2/70-275 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GF SQ 11 O33983/70-275 -------------------------LQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQLKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDSAHSDGKGTVWSHDAVTRYLGGTTHTDPVAYFNQWGYNFNNFVSLINEKYKAMQVN---Y----E Q9AIS0/321-548 FSSVAKPRMMYAVNKKT----TSSLPKYTPQVKS-----SINDYIRKKNYKAPQIEENYTSYFPKYGYRNGVGRPEGIVVHDTANDNSTIDGEINYMKNNYQSAFVHAFVDGNRIVETAPTDYLSWGAGPQGNERFINVEIVHTHDYDSFARSMNNYADYAATQLQYYGLKPDSAENDGQGTVWTHYAISRYLGGTDHTDPHQYFRSHNYSYAELYDLIYEKY-LIKTGQVAPWGTSS Q8Y496/70-275 -------------------------LQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQLKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDSAHSDGKGTVWSHDAVTRYLGGTTHTDPVAYFNQWGYNFNNFVSLINEKYKAMQVN---Y----E A0A0U1E3A9/399-629 -SSVAKPRMMYSVNKKTTSKATSSLPKYTPQVNS-----SINNYIRKNNFKAPQIEENYTSYFPKYGYRYGVGRPEGIVVHDTANENSTIDGEINFMKNNYESAFVHAFVDGNRIVETAPTDYLSWGAGPAGNERFINVEIVHTHDYASFARSMNNYADYAATQLVYYGLKPDSAENDGQGTVWTHYAISRWLGGTDHADPHQYFSNHNYSYAELYDLINEKY-LIKTGQVAPWGTTS Q927T5/64-277 -------------------DETNSVLKTTSLLRATTGYPDVNAYIKSNKFSTASIEKQLKSQFPKFNYRNGYGKPEGVVIHETANNSSTIEGEISYMSRNYNNAFVHSFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYKLPVDSAHSDGKGTIWSHDAVTRYLGGTTHTDPVGYFNQWGYNFNSFVTLINEKYKAIQASKVTY----- A0ALP4/65-276 --------------------ETNSVLKEVPLLRA-AGYPDVNSYIKTNKFSTASIEKQLKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFSRSINNYAYYTAYLLDQYKLPVDSAHSDGKGTVWSHDAVTRYLGGTTHTDPVGYFNQWGYNFNSFVTLVNEKYKAIQSSKVTY----- C5QR57/321-548 FSSVAKPRMMYAVNKKT----TSSLPKYTPQVKS-----SINDYIRKKNYKAPQIEENYTSYFPKYGYRNGVGRPEGIVVHDTANDNSTIDGEINYMKNNYQSAFVHAFVDGNRIVETAPTDYLSWGAGPQGNERFINVEIVHTHDYDSFARSMNNYADYAATQLQYYGLKPDSAENDGQGTVWTHYAISRYLGGTDHTDPHQYFRSHNYSYAELYDLIYEKY-LIKTGQVAPWGTSS Q9EXF2/70-277 -------------------------LQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQLKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDSAHSDGKGTVWSHDAVTRYLGGTTHTDPVSYFNQWGYNFNSFVTLINEKYKAIQASKVTY----- A0A458VGF5/64-277 -------------------DETNSVLKTTSLLRATTGYPDVNAYIKSNKFSTASIEKQLKSQFPKFNYRNGYGKPEGVVIHETANNSSTIEGEISYMSRNYNNAFVHSFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYKLPVDSAHSDGKGTIWSHDAVTRYLGGTTHTDPVGYFNQWGYNFNSFVTLINEKYKAIQASKVTY----- A0A0E0V042/69-277 ------------------------VLKSVPLLRATTGYPDVNSYIKSNKFSTASIEKQLKSQFPKFNYRNGYGKPEGVVIHETANNSSTIEGEISYMSRNYNNAFVHSFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYKLPVDSAHSDGKGTVWSHDAVTRYLGGTTHTDPVSYFNQWGYNFNSFVTLINEKYKAIQASKVTY----- A0A463GKU2/70-275 -------------------------LQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQLKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRIIQIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDSAHSDGKGTVWSHDAVTRYLGGTTHTDPVAYFNQWGYNFNNFVSLINEKYKAMQVN---Y----E #=GC scorecons 0111111111101111100003233563575666222225794997466756649965559599975997949799979797999569994999689549956999969995699766599754599995469599959969666577598996999959894594594955999569969989695976979999597994499544596754644985999257645353411102 #=GC scorecons_70 __________________________*__*_*________**_***_*_*_*__**____*_****_****_*************__***_******__**__********__****__***___****___*_***_*****___**_*********_***__*__*_*__***__*******_*_**_******_****__**____*_*__*__**_***__**___________ #=GC scorecons_80 _____________________________*___________*_**____*____**____*_****_**_*_*_*****_*_***__***_***_**__**__****_***__**____**____****___*_***_**_*____*__****_****_***__*__*_*__***__**_****_*_*__******_****__**____*_*_____**_***__*____________ #=GC scorecons_90 _________________________________________*_**_________**____*_***__**_*_*_***_*_*_***__***_***_**__**__****_***__**____**____****___*_***_**_*_______****_****_***__*__*_*__***__**_**_*_*_*__*_****_*_**__**____*_______**_***_______________ //