# STOCKHOLM 1.0
#=GF ID 3.40.50.740/FF/000015
#=GF DE Anaerobic dimethyl sulfoxide reductase subunit A
#=GF AC 3.40.50.740/FF/000015
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.179
#=GS P77374/123-194_409-569      AC P77374
#=GS P77374/123-194_409-569      OS Escherichia coli K-12
#=GS P77374/123-194_409-569      DE Putative dimethyl sulfoxide reductase chain YnfE
#=GS P77374/123-194_409-569      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS P77374/123-194_409-569      DR GO; GO:0005515; GO:0033797; 
#=GS Q8ZPJ6/414-625              AC Q8ZPJ6
#=GS Q8ZPJ6/414-625              OS Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
#=GS Q8ZPJ6/414-625              DE Putative dimethyl sulfoxide reductase, chain A1
#=GS Q8ZPJ6/414-625              DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0M9JBK1/123-194_409-569  AC A0A0M9JBK1
#=GS A0A0M9JBK1/123-194_409-569  OS Achromobacter sp.
#=GS A0A0M9JBK1/123-194_409-569  DE Dimethyl sulfoxide reductase DmsA
#=GS A0A0M9JBK1/123-194_409-569  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter; Achromobacter sp.; 
#=GS K0X6P7/123-194_409-569      AC K0X6P7
#=GS K0X6P7/123-194_409-569      OS Shigella flexneri 1485-80
#=GS K0X6P7/123-194_409-569      DE Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family
#=GS K0X6P7/123-194_409-569      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS W1GVH4/15-226               AC W1GVH4
#=GS W1GVH4/15-226               OS Klebsiella pneumoniae ISC21
#=GS W1GVH4/15-226               DE Anaerobic selenate reductase, molybdenum cofactor-containing periplasmic protein # YnfE
#=GS W1GVH4/15-226               DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella pneumoniae; 
#=GS A0A3U7IW63/413-624          AC A0A3U7IW63
#=GS A0A3U7IW63/413-624          OS Salmonella enterica subsp. arizonae
#=GS A0A3U7IW63/413-624          DE Dimethyl sulfoxide reductase subunit A
#=GS A0A3U7IW63/413-624          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A3X7FS53/412-624          AC A0A3X7FS53
#=GS A0A3X7FS53/412-624          OS Salmonella enterica
#=GS A0A3X7FS53/412-624          DE Dimethyl sulfoxide reductase subunit A
#=GS A0A3X7FS53/412-624          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GS A0A090HSJ0/123-194_409-569  AC A0A090HSJ0
#=GS A0A090HSJ0/123-194_409-569  OS Escherichia coli
#=GS A0A090HSJ0/123-194_409-569  DE Anaerobic dimethyl sulfoxide reductase subunit A
#=GS A0A090HSJ0/123-194_409-569  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS H4UJ75/123-194_409-569      AC H4UJ75
#=GS H4UJ75/123-194_409-569      OS Escherichia coli DEC6A
#=GS H4UJ75/123-194_409-569      DE Putative dimethyl sulfoxide reductase chain ynfE
#=GS H4UJ75/123-194_409-569      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS F4SJA6/123-194_409-569      AC F4SJA6
#=GS F4SJA6/123-194_409-569      OS Escherichia coli H736
#=GS F4SJA6/123-194_409-569      DE Putative dimethyl sulfoxide reductase chain YnfE
#=GS F4SJA6/123-194_409-569      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A377HBX6/123-194_409-569  AC A0A377HBX6
#=GS A0A377HBX6/123-194_409-569  OS Escherichia coli
#=GS A0A377HBX6/123-194_409-569  DE Putative dimethyl sulfoxide reductase, oxidoreductase subunit
#=GS A0A377HBX6/123-194_409-569  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0E1SUF1/123-194_409-569  AC A0A0E1SUF1
#=GS A0A0E1SUF1/123-194_409-569  OS Escherichia coli 53638
#=GS A0A0E1SUF1/123-194_409-569  DE Anaerobic dimethyl sulfoxide reductase chain A
#=GS A0A0E1SUF1/123-194_409-569  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS Q57PD9/414-625              AC Q57PD9
#=GS Q57PD9/414-625              OS Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
#=GS Q57PD9/414-625              DE Putative dimethyl sulphoxide reductase, chain A1
#=GS Q57PD9/414-625              DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0F6B1A2/414-625          AC A0A0F6B1A2
#=GS A0A0F6B1A2/414-625          OS Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
#=GS A0A0F6B1A2/414-625          DE Putative dimethyl sulphoxide reductase chain A1
#=GS A0A0F6B1A2/414-625          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A9MRM9/413-624              AC A9MRM9
#=GS A9MRM9/413-624              OS Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
#=GS A9MRM9/413-624              DE Uncharacterized protein
#=GS A9MRM9/413-624              DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A447NUF7/413-624          AC A0A447NUF7
#=GS A0A447NUF7/413-624          OS Salmonella enterica subsp. enterica serovar Sanjuan
#=GS A0A447NUF7/413-624          DE Dimethyl sulfoxide reductase, subunit A1
#=GS A0A447NUF7/413-624          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A401B524/413-624          AC A0A401B524
#=GS A0A401B524/413-624          OS Salmonella enterica subsp. enterica
#=GS A0A401B524/413-624          DE Dimethyl sulfoxide reductase subunit A
#=GS A0A401B524/413-624          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A379NKL0/412-624          AC A0A379NKL0
#=GS A0A379NKL0/412-624          OS Salmonella enterica subsp. enterica serovar Bovismorbificans
#=GS A0A379NKL0/412-624          DE Dimethyl sulfoxide reductase, subunit A1
#=GS A0A379NKL0/412-624          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3V2DXA6/412-624          AC A0A3V2DXA6
#=GS A0A3V2DXA6/412-624          OS Salmonella enterica subsp. enterica
#=GS A0A3V2DXA6/412-624          DE Dimethyl sulfoxide reductase subunit A
#=GS A0A3V2DXA6/412-624          DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS W1DZH0/15-223               AC W1DZH0
#=GS W1DZH0/15-223               OS Klebsiella pneumoniae IS46
#=GS W1DZH0/15-223               DE Anaerobic selenate reductase, molybdenum cofactor-containing periplasmic protein # YnfE
#=GS W1DZH0/15-223               DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella pneumoniae; 
#=GF SQ 20
P77374/123-194_409-569              GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
Q8ZPJ6/414-625                      ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDDLKKMGIYKRKDPNGHF
A0A0M9JBK1/123-194_409-569          GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
K0X6P7/123-194_409-569              GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
W1GVH4/15-226                       ----------------------------------------------------------------------NSGARESTYTITIERLPVLENPVKTAISCFTWTDAIARGPEMTASRDGVRGKEKLDVPIKFLWNYAGNTIINQHSDINKTHEILQDESKCETIVVIDNFMTSSAKYADLLLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATSAKFERKPIYWILSEVAKRLGDDVHQRFTEGRSQEQWLQYLYAKMVAKDPALPAYEDLKRMGIYKRKDPNG--
A0A3U7IW63/413-624                  ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHF
A0A3X7FS53/412-624                  -----------------------------------------------------------------------SGARESTYTITIERLSVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDDLKKMGIYKRKDPNGHF
A0A090HSJ0/123-194_409-569          GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
H4UJ75/123-194_409-569              GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
F4SJA6/123-194_409-569              GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
A0A377HBX6/123-194_409-569          GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
A0A0E1SUF1/123-194_409-569          GEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGP---------------------------------------------------
Q57PD9/414-625                      ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDDLKKMGIYKRKDPNGHF
A0A0F6B1A2/414-625                  ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDDLKKMGIYKRKDPNGHF
A9MRM9/413-624                      ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHF
A0A447NUF7/413-624                  ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHF
A0A401B524/413-624                  ------------------------------------------------------------------------GARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHF
A0A379NKL0/412-624                  -----------------------------------------------------------------------SGARESTYTITIERLSVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDDLKKMGIYKRKDPNGHF
A0A3V2DXA6/412-624                  -----------------------------------------------------------------------SGARESTYTITIERLSVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDDLKKMGIYKRKDPNGHF
W1DZH0/15-223                       ----------------------------------------------------------------------NSGARESTYTITIERLPVLENPVKTAISCFTWTDAIARGPEMTASRDGVRGKEKLDVPIKFLWNYAGNTIINQHSDINKTHEILQDESKCETIVVIDNFMTSSAKYADLLLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATSAKFERKPIYWILSEVAKRLGDDVHQRFTEGRTQEQWLQYLYAKMVAKDPALPAYEDLKRMGIYKRKD-----
#=GC scorecons                      11111111111111111111111111111111111111111111111111111111111111111111112499999999999999799799999699998999995699699959999999899999999699999998799999999999999996999799997999999999998999999999999999999999999999699696499999999979997979995222222222222122222222221222222222212222222222211111
#=GC scorecons_70                   ________________________________________________________________________***********************_**********_*******_******************************************_***************************************************_*__*******************____________________________________________________
#=GC scorecons_80                   ________________________________________________________________________*****************_*****_**********__**_***_****************_********_****************_********_***************************************_**_*__*********_***_*_***____________________________________________________
#=GC scorecons_90                   ________________________________________________________________________**************_**_*****_****_*****__**_***_****************_********_****************_***_****_***************************************_**_*__*********_***_*_***____________________________________________________
//