# STOCKHOLM 1.0
#=GF ID 3.40.50.410/FF/000102
#=GF DE ATP-dependent DNA helicase 2 subunit KU80
#=GF AC 3.40.50.410/FF/000102
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.356
#=GS Q9FQ09/1-198      AC Q9FQ09
#=GS Q9FQ09/1-198      OS Arabidopsis thaliana
#=GS Q9FQ09/1-198      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS Q9FQ09/1-198      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FQ09/1-198      DR GO; GO:0000723; GO:0003690; GO:0005515; GO:0006281; GO:0006302; GO:0006303; GO:0009408; GO:0015074; 
#=GS Q9FQ09/1-198      DR EC; 3.6.4.12; 
#=GS Q75IP6/1-195      AC Q75IP6
#=GS Q75IP6/1-195      OS Oryza sativa Japonica Group
#=GS Q75IP6/1-195      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS Q75IP6/1-195      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q75IP6/1-195      DR GO; GO:0005515; 
#=GS Q75IP6/1-195      DR EC; 3.6.4.12; 
#=GS A0A1P8ASX4/1-198  AC A0A1P8ASX4
#=GS A0A1P8ASX4/1-198  OS Arabidopsis thaliana
#=GS A0A1P8ASX4/1-198  DE ATP-dependent DNA helicase 2 subunit KU80
#=GS A0A1P8ASX4/1-198  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS D7U7S2/20-199     AC D7U7S2
#=GS D7U7S2/20-199     OS Vitis vinifera
#=GS D7U7S2/20-199     DE ATP-dependent DNA helicase 2 subunit KU80
#=GS D7U7S2/20-199     DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS D7U7S3/1-176      AC D7U7S3
#=GS D7U7S3/1-176      OS Vitis vinifera
#=GS D7U7S3/1-176      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS D7U7S3/1-176      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS I1K2X5/1-198      AC I1K2X5
#=GS I1K2X5/1-198      OS Glycine max
#=GS I1K2X5/1-198      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS I1K2X5/1-198      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS R0GJZ4/1-197      AC R0GJZ4
#=GS R0GJZ4/1-197      OS Capsella rubella
#=GS R0GJZ4/1-197      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS R0GJZ4/1-197      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7KC08/1-202      AC D7KC08
#=GS D7KC08/1-202      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KC08/1-202      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS D7KC08/1-202      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A1D6LC75/1-202  AC A0A1D6LC75
#=GS A0A1D6LC75/1-202  OS Zea mays
#=GS A0A1D6LC75/1-202  DE ATP-dependent DNA helicase 2 subunit KU80
#=GS A0A1D6LC75/1-202  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1GKM8/1-195      AC I1GKM8
#=GS I1GKM8/1-195      OS Brachypodium distachyon
#=GS I1GKM8/1-195      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS I1GKM8/1-195      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0D9W1K9/1-197  AC A0A0D9W1K9
#=GS A0A0D9W1K9/1-197  OS Leersia perrieri
#=GS A0A0D9W1K9/1-197  DE ATP-dependent DNA helicase 2 subunit KU80
#=GS A0A0D9W1K9/1-197  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; 
#=GS J3LUY2/1-195      AC J3LUY2
#=GS J3LUY2/1-195      OS Oryza brachyantha
#=GS J3LUY2/1-195      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS J3LUY2/1-195      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS I1PHK2/1-197      AC I1PHK2
#=GS I1PHK2/1-197      OS Oryza glaberrima
#=GS I1PHK2/1-197      DE ATP-dependent DNA helicase 2 subunit KU80
#=GS I1PHK2/1-197      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GF SQ 13
Q9FQ09/1-198              MARNREGLVLVLDVGPAMRSVLPDVEK-ACSMLLQKKLIYNKYDEVGIVVFGTEETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKG--KKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEENDHLLTLFSSNAIAKTVNV-------
Q75IP6/1-195              MARNKEALVLLLDVGPSMHGVLQEVEN-ICSTLVHKKLVYNRSDEIGVVLFGTKETSNELAKELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNI-KG--KQRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRE--SGVRHNAVMDENDQLLYHFRERSVTKVVHV-------
A0A1P8ASX4/1-198          MARNREGLVLVLDVGPAMRSVLPDVEK-ACSMLLQKKLIYNKYDEVGIVVFGTEETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKG--KKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEENDHLLTLFSSNAIAKTVNV-------
D7U7S2/20-199             TI------------------FCQKLKNSASCYCRRRHLIYNKKDLVGIVLFGTKVTKNELTKKVGGYKYVLVSQDIKVVDGDLVEAVRELPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGKIKKRLCLITSALCPTKGPYKGAKEDEIGTIAEQMTAHGIRLECIVARGRLSGNMNMRIMEENDLLLKLFSKKTIAKT----------
D7U7S3/1-176              -----------------MHTFLPEVEK-LCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKG--KKRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTA------------
I1K2X5/1-198              MARNKEALLLLLDVGPSMHPALSEIEK-VCSMLVHKKLIYSKYDEVGIVLFGTEDTNNELTTEVGGYQHVVVLKNIKVVDGDIVEALQQLPRGTTDGDFLDAVIVGMDVLVKKFGVTNKG--KKRVCLITNAQCQIKESDEGTKEEQVTTIAKQMTAHGIKMESIIMRGKLSQDANKGIMDENDRLLNIFSKETSTRLLYV-------
R0GJZ4/1-197              MARNREGLVLLLDVGPAMHSVLPDVEK-ACSLLLQKKLIYNKYDEVGIVVFGTEETANELATEIGGYEHVKVLRNIRVVDEVVAEHVKHLPRGTVAGDFLDALIVGMDMLIKIYSGGQKG--KKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSSLSGDAHEKVIEENDHLLNLFSSNAIAKTVY--------
D7KC08/1-202              MARNREGLVLVLDVGPAMHSVLPDVEK-ACSMLLQKKLIYNKYDEVGIVVFGTEETGNELAREIGGYENVTVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAQKG--KKRLCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEENDHLLNLFSSNAIAKTVNVESP---L
A0A1D6LC75/1-202          MARNREVVILLLDVGPSMHGVLLEVKN-VCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELAKDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KG--KRRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFRE--PGVHHNDVMEENDRLLHQFRNRSVAKVVQVDNPTSLL
I1GKM8/1-195              MARNKEGLVLLLDVGPSMHGALQEVEN-VCSTLLRKKLVYNRSDEVGIVLFGTKETCNDLAKEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KG--KHRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRE--SGVQHNSVMDENDQLLYHFRDRSVAKVVQV-------
A0A0D9W1K9/1-197          MARNKEALVLLLDVGPSMHGVLQQVEN-ICSTLVHKKLVYNKSDEIGVVLFGTKETCNELAKELGGYNHVVVARDIKVVDEGTTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNM-KG--KQRMCLITDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIVFRE--SGVPHNAVMDENDQLLYHFRERSVTKVVQVDS-----
J3LUY2/1-195              MARNKEALVLLLDVGPSMHGVLQQVEN-VCSTLVLKKLVYNRSDEIGVVLFGTKETCNELAKELGGYKHVVVARDIKVVDEETTHALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNM-KG--KQRMCLITDAQHPLRDPPQGTKKEQVDTIADQMKKHEMKMDCIVFRE--SGVLHNAVMDENDQLLYHFRERSVAKVVQV-------
I1PHK2/1-197              MARNKEALVLLLDVGPSMHGVLQEVEN-ICSTLVHKKLVYNRSDEIGVVLFGTKETSNELAKELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNI-KG--KQRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRE--SGVRHNAVMDENDQLLYHFRERSVTKVVQVDS-----
#=GC scorecons            6655453445455555365357457760476475587979774977979699965939896675999569494659799863445566599798459999986799698887576441890096969989484574778369795877499935845657877697494128743644777999499349535556644240000000
#=GC scorecons_70         _________________*___*__**___**_*__*******_**********__*_****_*_***_**_*_*_******_____*__*****__****************_**___**__*_*_****_*__*_***__***_***_***__*__*_****_**_*___**_____******_**__*_____**___________
#=GC scorecons_80         _____________________*__*____*__*__***_***_*_****_***__*_***__*_***__*_*___*****_________*****__******__**_*****_*____**__*_*_****_*_____**__***_***_***__*____****_**_*___**_____*__***_**__*__________________
#=GC scorecons_90         ___________________________________*_*_*___*__*_*_***__*_***____***__*_*___*_***_________**_*___*****___**_****_______**__*_*_****_*______*__*_*_____***__*_____*___*__*_____________***_**__*__________________
//