# STOCKHOLM 1.0
#=GF ID 3.40.50.2300/FF/000405
#=GF DE RNA polymerase II subunit A C-terminal domain phosphatase
#=GF AC 3.40.50.2300/FF/000405
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.261
#=GS Q22453/1-74        AC Q22453
#=GS Q22453/1-74        OS Caenorhabditis elegans
#=GS Q22453/1-74        DE RNA polymerase II subunit A C-terminal domain phosphatase ssup-72
#=GS Q22453/1-74        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q22453/1-74        DR EC; 3.1.3.16; 
#=GS Q558Z3/16-89       AC Q558Z3
#=GS Q558Z3/16-89       OS Dictyostelium discoideum
#=GS Q558Z3/16-89       DE RNA polymerase II subunit A C-terminal domain phosphatase SSU72
#=GS Q558Z3/16-89       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q558Z3/16-89       DR EC; 3.1.3.16; 
#=GS A0A0D1DV92/41-115  AC A0A0D1DV92
#=GS A0A0D1DV92/41-115  OS Ustilago maydis 521
#=GS A0A0D1DV92/41-115  DE Chromosome 10, whole genome shotgun sequence
#=GS A0A0D1DV92/41-115  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS K2HMI9/14-79       AC K2HMI9
#=GS K2HMI9/14-79       OS Entamoeba nuttalli P19
#=GS K2HMI9/14-79       DE Ssu72 family protein
#=GS K2HMI9/14-79       DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS A2FVC5/1-67        AC A2FVC5
#=GS A2FVC5/1-67        OS Trichomonas vaginalis
#=GS A2FVC5/1-67        DE SSU72 protein-related protein
#=GS A2FVC5/1-67        DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS M2RJK4/14-79       AC M2RJK4
#=GS M2RJK4/14-79       OS Entamoeba histolytica KU27
#=GS M2RJK4/14-79       DE RNA polymerase II subunit A Cterminal domain phosphatase SSU72
#=GS M2RJK4/14-79       DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS B0EM07/14-80       AC B0EM07
#=GS B0EM07/14-80       OS Entamoeba dispar SAW760
#=GS B0EM07/14-80       DE RNA polymerase II subunit A C-terminal domain phosphatase SSU72, putative
#=GS B0EM07/14-80       DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba dispar; 
#=GS F1A1L0/16-87       AC F1A1L0
#=GS F1A1L0/16-87       OS Dictyostelium purpureum
#=GS F1A1L0/16-87       DE Uncharacterized protein
#=GS F1A1L0/16-87       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS R9NVS3/132-206     AC R9NVS3
#=GS R9NVS3/132-206     OS Pseudozyma hubeiensis SY62
#=GS R9NVS3/132-206     DE RNA polymerase II subunit A C-terminal domain phosphatase
#=GS R9NVS3/132-206     DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS E3LQU8/1-76        AC E3LQU8
#=GS E3LQU8/1-76        OS Caenorhabditis remanei
#=GS E3LQU8/1-76        DE CRE-SSUP-72 protein
#=GS E3LQU8/1-76        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS C4M1T3/14-79       AC C4M1T3
#=GS C4M1T3/14-79       OS Entamoeba histolytica
#=GS C4M1T3/14-79       DE Uncharacterized protein
#=GS C4M1T3/14-79       DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M7WGG6/14-79       AC M7WGG6
#=GS M7WGG6/14-79       OS Entamoeba histolytica HM-3:IMSS
#=GS M7WGG6/14-79       DE RNA polymerase II subunit A, putative
#=GS M7WGG6/14-79       DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GF SQ 12
Q22453/1-74                M--EYSSKLRFAVSCSSNMNRSMEAHGILKKRGF-NIESYGSGNQVKMPGPTVDKPNCYEFGPTTYEDIYADLTNKD---
Q558Z3/16-89               I--ANQCNKRIAMVCASNQNRSLEAHHLFVKNGFKNIRSFGTSAHCKLPGPSIHQPNIFSFG-TPYQEIYTSLKNQD---
A0A0D1DV92/41-115          AGSSSDNNVLFCVVCASNQNRSMAAHALLAKSGF-NVTSAGTGSAVRLPGPKINLPNIYPFG-TAYTDIISDLNSKD---
K2HMI9/14-79               ---------SIAVICRSNQNRSISAHCRLKQLGY-NVSSFGTGVYTILPGATRNFG--FQFG-IPYKDIKNSLPKDEAS-
A2FVC5/1-67                M--TSNNQLAFACVCASNVNRSMEGHRVLKEAGF-NVSSYGTNDYVKMPGAS-NVPLQFDFG-ATYKEILSK--------
M2RJK4/14-79               ---------SIAVICRSNQNRSISAHCRLKQLGY-NVSSFGTGVYTILPGATRNFG--FQFG-IPYKDIKNSLPKDEAS-
B0EM07/14-80               ---------SIAVICRSNQNRSISAHCRLKQLGY-NVSSFGTGVYTILPGATRNFG--FQFG-IPYKDIKNSLPKDEVSV
F1A1L0/16-87               I--ANQCTKKIAMVCASNQNRSLEAHYLFVKTGFKNIRSFGTSGHCKLPGPSIHQPNIFSFG-TPYSEIYTTLRD-----
R9NVS3/132-206             STSSSDSNVLFCVVCASNQNRSMAAHSLLAQSGF-NVTSAGTGSAVRLPGPKINLPNIYPFG-TAYTDIISDLNSKD---
E3LQU8/1-76                M--EYPSKLRFAVSCSSNMNRSMEAHLILKKRGF-NIESYGSGTQVKMPGPTIDKPNCYEFGPTTYDDIFADLTNKDKD-
C4M1T3/14-79               ---------SIAVICRSNQNRSISAHCRLKQLGY-NVSSFGTGVYTILPGATRNFG--FQFG-IPYKDIKNSLPKDEAS-
M7WGG6/14-79               ---------SIAVICRSNQNRSISAHCRLKQLGY-NVSSFGTGVYTILPGATRNFG--FQFG-IPYKDIKNSLPKDEAS-
#=GC scorecons             10011111135665949959996479337453970974959763444799653535217499055947934473334010
#=GC scorecons_70          ___________*__*_**_***__**__*___**_**_*_**_____***________*_**___*_**___*_______
#=GC scorecons_80          ______________*_**_***__**__*___**_*__*_**______**________*_**___*_**___________
#=GC scorecons_90          ______________*_**_***___*______*__*__*_*_______**__________**___*__*___________
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