# STOCKHOLM 1.0
#=GF ID 3.40.50.2300/FF/000316
#=GF DE Two-component response regulator-like APRR1
#=GF AC 3.40.50.2300/FF/000316
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 43.403
#=GS Q9LKL2/19-202      AC Q9LKL2
#=GS Q9LKL2/19-202      OS Arabidopsis thaliana
#=GS Q9LKL2/19-202      DE Two-component response regulator-like APRR1
#=GS Q9LKL2/19-202      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9LKL2/19-202      DR GO; GO:0003677; GO:0003700; GO:0005515; GO:0005634; GO:0006351; GO:0006355; GO:0007623; GO:0010031; GO:0010468; GO:0010629; 
#=GS Q689G9/28-276      AC Q689G9
#=GS Q689G9/28-276      OS Oryza sativa Japonica Group
#=GS Q689G9/28-276      DE Two-component response regulator-like PRR1
#=GS Q689G9/28-276      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q689G9/28-276      DR GO; GO:0005515; GO:0005634; 
#=GS A0A178UC73/19-202  AC A0A178UC73
#=GS A0A178UC73/19-202  OS Arabidopsis thaliana
#=GS A0A178UC73/19-202  DE TOC1
#=GS A0A178UC73/19-202  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1J3EWG1/19-206  AC A0A1J3EWG1
#=GS A0A1J3EWG1/19-206  OS Noccaea caerulescens
#=GS A0A1J3EWG1/19-206  DE Two-component response regulator-like APRR1
#=GS A0A1J3EWG1/19-206  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A087GDE4/19-198  AC A0A087GDE4
#=GS A0A087GDE4/19-198  OS Arabis alpina
#=GS A0A087GDE4/19-198  DE Timing of cab expression 1
#=GS A0A087GDE4/19-198  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS R0GV80/19-199      AC R0GV80
#=GS R0GV80/19-199      OS Capsella rubella
#=GS R0GV80/19-199      DE Uncharacterized protein
#=GS R0GV80/19-199      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7MUK2/19-200      AC D7MUK2
#=GS D7MUK2/19-200      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MUK2/19-200      DE Uncharacterized protein
#=GS D7MUK2/19-200      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A0N7DY45/1-181   AC A0A0N7DY45
#=GS A0A0N7DY45/1-181   OS Arabidopsis lyrata subsp. petraea
#=GS A0A0N7DY45/1-181   DE Timing of CAB expression 1 protein
#=GS A0A0N7DY45/1-181   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. petraea; 
#=GS A0A0D9VID6/34-282  AC A0A0D9VID6
#=GS A0A0D9VID6/34-282  OS Leersia perrieri
#=GS A0A0D9VID6/34-282  DE Uncharacterized protein
#=GS A0A0D9VID6/34-282  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; 
#=GS A0A0E0K2H5/28-271  AC A0A0E0K2H5
#=GS A0A0E0K2H5/28-271  OS Oryza punctata
#=GS A0A0E0K2H5/28-271  DE Uncharacterized protein
#=GS A0A0E0K2H5/28-271  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS A0A0E0NHU6/28-271  AC A0A0E0NHU6
#=GS A0A0E0NHU6/28-271  OS Oryza rufipogon
#=GS A0A0E0NHU6/28-271  DE Uncharacterized protein
#=GS A0A0E0NHU6/28-271  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0D9YV17/28-271  AC A0A0D9YV17
#=GS A0A0D9YV17/28-271  OS Oryza glumipatula
#=GS A0A0D9YV17/28-271  DE Uncharacterized protein
#=GS A0A0D9YV17/28-271  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS I1P292/28-271      AC I1P292
#=GS I1P292/28-271      OS Oryza glaberrima
#=GS I1P292/28-271      DE Uncharacterized protein
#=GS I1P292/28-271      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0E0IKH5/28-277  AC A0A0E0IKH5
#=GS A0A0E0IKH5/28-277  OS Oryza sativa f. spontanea
#=GS A0A0E0IKH5/28-277  DE Uncharacterized protein
#=GS A0A0E0IKH5/28-277  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS A0A0E0NHU7/28-273  AC A0A0E0NHU7
#=GS A0A0E0NHU7/28-273  OS Oryza rufipogon
#=GS A0A0E0NHU7/28-273  DE Uncharacterized protein
#=GS A0A0E0NHU7/28-273  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS B8AFH0/28-275      AC B8AFH0
#=GS B8AFH0/28-275      OS Oryza sativa Indica Group
#=GS B8AFH0/28-275      DE Uncharacterized protein
#=GS B8AFH0/28-275      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A1J3J6Y3/19-200  AC A0A1J3J6Y3
#=GS A0A1J3J6Y3/19-200  OS Noccaea caerulescens
#=GS A0A1J3J6Y3/19-200  DE Two-component response regulator-like APRR1
#=GS A0A1J3J6Y3/19-200  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GF SQ 17
Q9LKL2/19-202              VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTNPQRGNLSHQENEWSV---------------------------------------------------------------------
Q689G9/28-276              VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSSFDSEL----
A0A178UC73/19-202          VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTNPQRGNLSHQENEWSV---------------------------------------------------------------------
A0A1J3EWG1/19-206          VRILLCDNDSKSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFELAGSDPSDQNTNSTNLFSDDTDDRSLRSNNLQRGALSQQENEWPVAIAS-----------------------------------------------------------------
A0A087GDE4/19-198          VRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDIPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNSTNLFSDDTDDRSLRSTNPQRGTLSHQEN-------------------------------------------------------------------------
R0GV80/19-199              VRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNSTNLFSDDTDDRSLRSTNPLRGNLSHQENE------------------------------------------------------------------------
D7MUK2/19-200              VRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNSTNLFSDDTDERSLRSTNLQRGNLSHQENEW-----------------------------------------------------------------------
A0A0N7DY45/1-181           ---LLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNSTNLFSDDTDERSLRSTNLQRGNLSHQENEWSV---------------------------------------------------------------------
A0A0D9VID6/34-282          VRILLCDSDTTSSREVLRLLCNCSYQVTCAKSPRQVINTLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKDKTEDLPVSTEG----ASPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSSLDSELQRGA
A0A0E0K2H5/28-271          VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKDTPKGLPVCTEGGDQTSSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSS---------
A0A0E0NHU6/28-271          VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLPVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSS---------
A0A0D9YV17/28-271          VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLPVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSS---------
I1P292/28-271              VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTREGLPVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSS---------
A0A0E0IKH5/28-277          VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSSFDSELQ---
A0A0E0NHU7/28-273          VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLPVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSSFD-------
B8AFH0/28-275              VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGVMFSRPIKTNLRIAESSAFLAYVKSSTPTTSSFDSE-----
A0A1J3J6Y3/19-200          VRILLCDNDSKSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLAGSDPSDQNTNSTNLFSDDTDDRSLRSNNLQRGALSQQENEW-----------------------------------------------------------------------
#=GC scorecons             7779999695495599659965999999569969999659959657999999979896695599979969697996997999956999699999979999799999995999999999699999999969995665697964977995999996969999987645659455655666957333222222221111121212221111122222222222222212222222222222222222000000000
#=GC scorecons_70          *******_*__*__***_**__******__**_*****_**_*__*************_*__*********************_****_*******************_*******************_***_*__*****_*****_*****_*********_____*_______***_*________________________________________________________________________
#=GC scorecons_80          *******_*__*__**__**__******__**_****__**_*___*******_***__*__***_**_*_*_**_**_****__***_******_****_*******_*********_*********_***_____*_*__*_***_*****_*_******______*_________*_*________________________________________________________________________
#=GC scorecons_90          ___****_*__*__**__**__******__**_****__**_*___*******_***__*__***_**_*_*_**_**_****__***_******_****_*******_*********_*********_***_____*_*__*__**_*****_*_******______*_________*__________________________________________________________________________
//