# STOCKHOLM 1.0
#=GF ID 3.40.50.2300/FF/000267
#=GF DE Virulence factors transcription regulator
#=GF AC 3.40.50.2300/FF/000267
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 28.929
#=GS P0A4H2/4-209      AC P0A4H2
#=GS P0A4H2/4-209      OS Bordetella pertussis Tohama I
#=GS P0A4H2/4-209      DE Virulence factors putative positive transcription regulator BvgA
#=GS P0A4H2/4-209      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS P0A4H2/4-209      DR GO; GO:0009405; 
#=GS Q9HZG3/3-207      AC Q9HZG3
#=GS Q9HZG3/3-207      OS Pseudomonas aeruginosa PAO1
#=GS Q9HZG3/3-207      DE Probable two-component response regulator
#=GS Q9HZG3/3-207      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q9HZG3/3-207      DR GO; GO:0051051; 
#=GS A0A1M9K4N4/4-209  AC A0A1M9K4N4
#=GS A0A1M9K4N4/4-209  OS Mycobacteroides abscessus subsp. abscessus
#=GS A0A1M9K4N4/4-209  DE Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
#=GS A0A1M9K4N4/4-209  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacteroides; Mycobacteroides abscessus; Mycobacteroides abscessus subsp. abscessus; 
#=GS A0A157VNK0/3-207  AC A0A157VNK0
#=GS A0A157VNK0/3-207  OS Enterobacter cloacae
#=GS A0A157VNK0/3-207  DE Transcriptional regulator
#=GS A0A157VNK0/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; 
#=GS A0A1G5DP98/3-207  AC A0A1G5DP98
#=GS A0A1G5DP98/3-207  OS Acinetobacter baumannii
#=GS A0A1G5DP98/3-207  DE Response regulator
#=GS A0A1G5DP98/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; 
#=GS A0A261W679/4-209  AC A0A261W679
#=GS A0A261W679/4-209  OS Bordetella genomosp. 6
#=GS A0A261W679/4-209  DE DNA-binding response regulator
#=GS A0A261W679/4-209  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella genomosp. 6; 
#=GS A0A291KZA7/4-209  AC A0A291KZA7
#=GS A0A291KZA7/4-209  OS Bordetella bronchiseptica
#=GS A0A291KZA7/4-209  DE DNA-binding response regulator
#=GS A0A291KZA7/4-209  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella bronchiseptica; 
#=GS P0A4H4/4-209      AC P0A4H4
#=GS P0A4H4/4-209      OS Bordetella parapertussis 12822
#=GS P0A4H4/4-209      DE Virulence factors putative positive transcription regulator BvgA
#=GS P0A4H4/4-209      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella parapertussis; 
#=GS A0A448BIB7/3-207  AC A0A448BIB7
#=GS A0A448BIB7/3-207  OS Pseudomonas fluorescens
#=GS A0A448BIB7/3-207  DE Two-component response regulator
#=GS A0A448BIB7/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A1F0J7V0/3-207  AC A0A1F0J7V0
#=GS A0A1F0J7V0/3-207  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0J7V0/3-207  DE DNA-binding response regulator
#=GS A0A1F0J7V0/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GS A0A2V2TSR4/3-207  AC A0A2V2TSR4
#=GS A0A2V2TSR4/3-207  OS Pseudomonas sp. RW410
#=GS A0A2V2TSR4/3-207  DE DNA-binding response regulator
#=GS A0A2V2TSR4/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; 
#=GS A0A1S1C5T8/3-207  AC A0A1S1C5T8
#=GS A0A1S1C5T8/3-207  OS Pseudomonas sp. HMSC059F05
#=GS A0A1S1C5T8/3-207  DE DNA-binding response regulator
#=GS A0A1S1C5T8/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC059F05; 
#=GS A0A0E8BMW2/4-209  AC A0A0E8BMW2
#=GS A0A0E8BMW2/4-209  OS Bordetella pertussis
#=GS A0A0E8BMW2/4-209  DE DNA-binding response regulator
#=GS A0A0E8BMW2/4-209  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0T7CP47/4-209  AC A0A0T7CP47
#=GS A0A0T7CP47/4-209  OS Bordetella pertussis 18323
#=GS A0A0T7CP47/4-209  DE Virulence factors transcription regulator
#=GS A0A0T7CP47/4-209  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0N2QPL0/4-209  AC A0A0N2QPL0
#=GS A0A0N2QPL0/4-209  OS Bordetella pertussis H921
#=GS A0A0N2QPL0/4-209  DE Virulence factors putative positive transcription regulator BvgA
#=GS A0A0N2QPL0/4-209  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS P0A4H3/4-209      AC P0A4H3
#=GS P0A4H3/4-209      OS Bordetella bronchiseptica RB50
#=GS P0A4H3/4-209      DE Virulence factors putative positive transcription regulator BvgA
#=GS P0A4H3/4-209      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella bronchiseptica; 
#=GS A0A1C7BSD2/3-207  AC A0A1C7BSD2
#=GS A0A1C7BSD2/3-207  OS Pseudomonas aeruginosa BL04
#=GS A0A1C7BSD2/3-207  DE Two-component system response regulator
#=GS A0A1C7BSD2/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS V6AD60/3-207      AC V6AD60
#=GS V6AD60/3-207      OS Pseudomonas aeruginosa MH27
#=GS V6AD60/3-207      DE Virulence factors putative positive transcription regulator BvgA
#=GS V6AD60/3-207      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS W1MGS4/3-207      AC W1MGS4
#=GS W1MGS4/3-207      OS Pseudomonas aeruginosa VRFPA03
#=GS W1MGS4/3-207      DE LuxR family transcriptional regulator
#=GS W1MGS4/3-207      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H2ZDA6/3-207  AC A0A0H2ZDA6
#=GS A0A0H2ZDA6/3-207  OS Pseudomonas aeruginosa UCBPP-PA14
#=GS A0A0H2ZDA6/3-207  DE Putative two-component response regulator
#=GS A0A0H2ZDA6/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A069QJZ7/3-207  AC A0A069QJZ7
#=GS A0A069QJZ7/3-207  OS Pseudomonas aeruginosa
#=GS A0A069QJZ7/3-207  DE DNA-binding response regulator
#=GS A0A069QJZ7/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0A8RH30/3-207  AC A0A0A8RH30
#=GS A0A0A8RH30/3-207  OS Pseudomonas aeruginosa
#=GS A0A0A8RH30/3-207  DE Virulence factors putative positive transcription regulator BvgA
#=GS A0A0A8RH30/3-207  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GF SQ 22
P0A4H2/4-209              KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
Q9HZG3/3-207              RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A1M9K4N4/4-209          KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
A0A157VNK0/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A1G5DP98/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A261W679/4-209          KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
A0A291KZA7/4-209          KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
P0A4H4/4-209              KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
A0A448BIB7/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A1F0J7V0/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A2V2TSR4/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A1S1C5T8/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A0E8BMW2/4-209          KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
A0A0T7CP47/4-209          KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
A0A0N2QPL0/4-209          KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
P0A4H3/4-209              KVLIIDDHPVLRFAVRVLMEKEGFEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTYKTRLLQKLNATSLVELIDLAKRNNLA
A0A1C7BSD2/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
V6AD60/3-207              RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
W1MGS4/3-207              RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A0H2ZDA6/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A069QJZ7/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
A0A0A8RH30/3-207          RILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLRRELKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVCKQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYS-DDVELLGRLSDREVSVLQYLSQGYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI
#=GC scorecons            77997999996959676969599567797999979665659944969979999997999999969955969997799999966999949665699999999665959676966995699699996665566595562595596649969966999596994999596759969999999996999599995999799769999695
#=GC scorecons_70         ************_*******_**_***********_*_*_**__*******************_**__*_***********__****_*_*__*********__*_***_*__**__**_****_**__**_*_____*__**__******_***_*_**_***_*_*_****************_****_************_*_
#=GC scorecons_80         __**_*****_*_*___*_*_**____*_****_*_____**__*_**_******_*******_**__*_***__******__****_*____********___*_*___*__**__**_****________*_____*__*___**_**__***_*_**_***_*___**_*********_***_****_***_**__****_*_
#=GC scorecons_90         __**_*****_*_*___*_*_**____*_****_*_____**__*_**_******_*******_**__*_***__******__****_*____********___*_*___*__**__**_****________*_____*__*___**_**__***_*_**_***_*___**_*********_***_****_***_**__****_*_
//