# STOCKHOLM 1.0
#=GF ID 3.40.50.2300/FF/000226
#=GF DE Sigma-54-dependent Fis family transcriptional regulator
#=GF AC 3.40.50.2300/FF/000226
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 6.291
#=GS P14375/1-129      AC P14375
#=GS P14375/1-129      OS Escherichia coli K-12
#=GS P14375/1-129      DE Transcriptional regulatory protein ZraR
#=GS P14375/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS P14375/1-129      DR GO; GO:0000156; GO:0000160; GO:0003677; GO:0006351; 
#=GS Q32AH7/1-129      AC Q32AH7
#=GS Q32AH7/1-129      OS Shigella dysenteriae Sd197
#=GS Q32AH7/1-129      DE Sensor HydH response regulator of hydrogenase 3 activity
#=GS Q32AH7/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella dysenteriae; 
#=GS A0A0M9JAU4/1-129  AC A0A0M9JAU4
#=GS A0A0M9JAU4/1-129  OS Achromobacter sp.
#=GS A0A0M9JAU4/1-129  DE Transcriptional regulatory protein ZraR
#=GS A0A0M9JAU4/1-129  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter; Achromobacter sp.; 
#=GS A0A3V4XB22/1-129  AC A0A3V4XB22
#=GS A0A3V4XB22/1-129  OS Salmonella enterica subsp. enterica
#=GS A0A3V4XB22/1-129  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A3V4XB22/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0H2VYI7/1-129  AC A0A0H2VYI7
#=GS A0A0H2VYI7/1-129  OS Shigella flexneri
#=GS A0A0H2VYI7/1-129  DE Response regulator of hydrogenase 3 activity (Sensor HydH)
#=GS A0A0H2VYI7/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A200LDI5/1-129  AC A0A200LDI5
#=GS A0A200LDI5/1-129  OS Shigella sonnei
#=GS A0A200LDI5/1-129  DE DNA-binding response regulator
#=GS A0A200LDI5/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella sonnei; 
#=GS A0A236LZG6/1-129  AC A0A236LZG6
#=GS A0A236LZG6/1-129  OS Shigella boydii
#=GS A0A236LZG6/1-129  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A236LZG6/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii; 
#=GS E2X3J7/1-129      AC E2X3J7
#=GS E2X3J7/1-129      OS Shigella dysenteriae 1617
#=GS E2X3J7/1-129      DE Transcriptional regulatory protein zraR
#=GS E2X3J7/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella dysenteriae; 
#=GS A0A090NHW8/1-129  AC A0A090NHW8
#=GS A0A090NHW8/1-129  OS Shigella dysenteriae WRSd3
#=GS A0A090NHW8/1-129  DE Two-component response regulator hydG
#=GS A0A090NHW8/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella dysenteriae; 
#=GS D2AD81/1-129      AC D2AD81
#=GS D2AD81/1-129      OS Shigella flexneri 2002017
#=GS D2AD81/1-129      DE Two component, sigma54 specific, transcriptional regulator, Fis family
#=GS D2AD81/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS I6G828/1-129      AC I6G828
#=GS I6G828/1-129      OS Shigella flexneri 1235-66
#=GS I6G828/1-129      DE Transcriptional regulatory protein zraR
#=GS I6G828/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A2Y2RGA5/1-129  AC A0A2Y2RGA5
#=GS A0A2Y2RGA5/1-129  OS Shigella flexneri 2a
#=GS A0A2Y2RGA5/1-129  DE Transcriptional regulator ZraR
#=GS A0A2Y2RGA5/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A2S4N461/1-129  AC A0A2S4N461
#=GS A0A2S4N461/1-129  OS Shigella flexneri
#=GS A0A2S4N461/1-129  DE DNA-binding response regulator
#=GS A0A2S4N461/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A127GSA5/1-129  AC A0A127GSA5
#=GS A0A127GSA5/1-129  OS Shigella flexneri 4c
#=GS A0A127GSA5/1-129  DE Transcriptional regulator
#=GS A0A127GSA5/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS S1HNQ8/1-129      AC S1HNQ8
#=GS S1HNQ8/1-129      OS Escherichia coli KTE107
#=GS S1HNQ8/1-129      DE Transcriptional regulatory protein zraR
#=GS S1HNQ8/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A069XP91/1-129  AC A0A069XP91
#=GS A0A069XP91/1-129  OS Escherichia coli 3-373-03_S4_C2
#=GS A0A069XP91/1-129  DE Transcriptional regulatory protein zraR
#=GS A0A069XP91/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A024L937/1-129  AC A0A024L937
#=GS A0A024L937/1-129  OS Escherichia coli
#=GS A0A024L937/1-129  DE Fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein
#=GS A0A024L937/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A1X3J9J0/1-129  AC A0A1X3J9J0
#=GS A0A1X3J9J0/1-129  OS Escherichia coli H386
#=GS A0A1X3J9J0/1-129  DE Transcriptional regulatory protein ZraR
#=GS A0A1X3J9J0/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A070SL67/1-129  AC A0A070SL67
#=GS A0A070SL67/1-129  OS Escherichia coli 2-210-07_S3_C3
#=GS A0A070SL67/1-129  DE Transcriptional regulatory protein zraR
#=GS A0A070SL67/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS G0F9W2/1-129      AC G0F9W2
#=GS G0F9W2/1-129      OS Escherichia coli UMNF18
#=GS G0F9W2/1-129      DE Transcriptional regulatory protein zraR
#=GS G0F9W2/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0E1M4I4/1-129  AC A0A0E1M4I4
#=GS A0A0E1M4I4/1-129  OS Escherichia coli 1303
#=GS A0A0E1M4I4/1-129  DE Fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein
#=GS A0A0E1M4I4/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS I2XFM8/1-129      AC I2XFM8
#=GS I2XFM8/1-129      OS Escherichia coli 2.3916
#=GS I2XFM8/1-129      DE Transcriptional regulator ZraR
#=GS I2XFM8/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS F4SS61/1-129      AC F4SS61
#=GS F4SS61/1-129      OS Escherichia coli H736
#=GS F4SS61/1-129      DE Transcriptional regulatory protein ZraR
#=GS F4SS61/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0V9RRQ5/1-129  AC A0A0V9RRQ5
#=GS A0A0V9RRQ5/1-129  OS Escherichia coli
#=GS A0A0V9RRQ5/1-129  DE Sigma-54-dependent response regulator transcription factor ZraR
#=GS A0A0V9RRQ5/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS S1P3V0/1-129      AC S1P3V0
#=GS S1P3V0/1-129      OS Escherichia coli KTE182
#=GS S1P3V0/1-129      DE Transcriptional regulatory protein zraR
#=GS S1P3V0/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A454AA33/1-129  AC A0A454AA33
#=GS A0A454AA33/1-129  OS Escherichia coli 536
#=GS A0A454AA33/1-129  DE Transcriptional regulatory protein ZraR
#=GS A0A454AA33/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0H2VD06/1-129  AC A0A0H2VD06
#=GS A0A0H2VD06/1-129  OS Escherichia coli CFT073
#=GS A0A0H2VD06/1-129  DE Transcriptional Regulatory protein zraR
#=GS A0A0H2VD06/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0H3PGH8/1-129  AC A0A0H3PGH8
#=GS A0A0H3PGH8/1-129  OS Escherichia coli O157:H7 str. EC869
#=GS A0A0H3PGH8/1-129  DE Response regulator ZraR
#=GS A0A0H3PGH8/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0F6CBW2/1-129  AC A0A0F6CBW2
#=GS A0A0F6CBW2/1-129  OS Escherichia coli Xuzhou21
#=GS A0A0F6CBW2/1-129  DE Transcriptional regulatory protein ZraR
#=GS A0A0F6CBW2/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS C3SI23/1-129      AC C3SI23
#=GS C3SI23/1-129      OS Escherichia coli
#=GS C3SI23/1-129      DE Response regulator HydG
#=GS C3SI23/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A1Z3UWK6/1-129  AC A0A1Z3UWK6
#=GS A0A1Z3UWK6/1-129  OS Escherichia coli O157
#=GS A0A1Z3UWK6/1-129  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A1Z3UWK6/1-129  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS Q8X613/1-129      AC Q8X613
#=GS Q8X613/1-129      OS Escherichia coli O157:H7
#=GS Q8X613/1-129      DE Transcriptional regulatory protein ZraR
#=GS Q8X613/1-129      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GF SQ 32
P14375/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
Q32AH7/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A0M9JAU4/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A3V4XB22/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHIIDA
A0A0H2VYI7/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A200LDI5/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A236LZG6/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
E2X3J7/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A090NHW8/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
D2AD81/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
I6G828/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A2Y2RGA5/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A2S4N461/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A127GSA5/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKALAHTHSIDA
S1HNQ8/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A069XP91/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A024L937/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A1X3J9J0/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A070SL67/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
G0F9W2/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A0E1M4I4/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
I2XFM8/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
F4SS61/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA
A0A0V9RRQ5/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSVDA
S1P3V0/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSVDA
A0A454AA33/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSVDA
A0A0H2VD06/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSVDA
A0A0H3PGH8/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHIIDA
A0A0F6CBW2/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHIIDA
C3SI23/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHIIDA
A0A1Z3UWK6/1-129          MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHIIDA
Q8X613/1-129              MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHIIDA
#=GC scorecons            999999999999999999999999999999999999979999999997999999999999999999999999797999999999999999999999999969999999999999999999999996899
#=GC scorecons_70         *********************************************************************************************************************************
#=GC scorecons_80         ***********************************************_****************************************************_************************_***
#=GC scorecons_90         *************************************_*********_************************_*_*************************_************************__**
//