# STOCKHOLM 1.0
#=GF ID 3.40.50.150/FF/000473
#=GF DE RNA-directed RNA polymerase L
#=GF AC 3.40.50.150/FF/000473
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.082
#=GS P03523/1648-1843  AC P03523
#=GS P03523/1648-1843  OS Vesicular stomatitis Indiana virus strain San Juan
#=GS P03523/1648-1843  DE RNA-directed RNA polymerase L
#=GS P03523/1648-1843  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Vesiculovirus; Indiana vesiculovirus; 
#=GS P03523/1648-1843  DR GO; GO:0005515; GO:0019012; GO:0039689; 
#=GS P03523/1648-1843  DR EC; 2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88; 
#=GS Q91DR9/1632-1835  AC Q91DR9
#=GS Q91DR9/1632-1835  OS Carp sprivivirus
#=GS Q91DR9/1632-1835  DE RNA-directed RNA polymerase L
#=GS Q91DR9/1632-1835  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Sprivivirus; Carp sprivivirus; 
#=GS Q91DR9/1632-1835  DR GO; GO:0039689; 
#=GS Q91DR9/1632-1835  DR EC; 2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88; 
#=GS O76726/98-310     AC O76726
#=GS O76726/98-310     OS Caenorhabditis elegans
#=GS O76726/98-310     DE Uncharacterized protein
#=GS O76726/98-310     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q8I931/97-253     AC Q8I931
#=GS Q8I931/97-253     OS Caenorhabditis elegans
#=GS Q8I931/97-253     DE Uncharacterized protein
#=GS Q8I931/97-253     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS B7UCZ7/1648-1843  AC B7UCZ7
#=GS B7UCZ7/1648-1843  OS Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP
#=GS B7UCZ7/1648-1843  DE Large structural protein
#=GS B7UCZ7/1648-1843  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Vesiculovirus; Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP; 
#=GS Q98776/1648-1843  AC Q98776
#=GS Q98776/1648-1843  OS Vesicular stomatitis Indiana virus strain Mudd-Summers
#=GS Q98776/1648-1843  DE RNA-directed RNA polymerase L
#=GS Q98776/1648-1843  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Vesiculovirus; Indiana vesiculovirus; 
#=GS Q98776/1648-1843  DR GO; GO:0039689; 
#=GS Q98776/1648-1843  DR EC; 2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88; 
#=GS Q8B0I0/1649-1843  AC Q8B0I0
#=GS Q8B0I0/1649-1843  OS Vesicular stomatitis Indiana virus (strain 98COE North America)
#=GS Q8B0I0/1649-1843  DE RNA-directed RNA polymerase L
#=GS Q8B0I0/1649-1843  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Vesiculovirus; Indiana vesiculovirus; 
#=GS Q8B0I0/1649-1843  DR GO; GO:0039689; 
#=GS Q8B0I0/1649-1843  DR EC; 2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88; 
#=GS Q8B0H5/1657-1845  AC Q8B0H5
#=GS Q8B0H5/1657-1845  OS Vesicular stomatitis Indiana virus (strain 85CLB South America)
#=GS Q8B0H5/1657-1845  DE RNA-directed RNA polymerase L
#=GS Q8B0H5/1657-1845  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Vesiculovirus; Indiana vesiculovirus; 
#=GS Q8B0H5/1657-1845  DR GO; GO:0039689; 
#=GS Q8B0H5/1657-1845  DR EC; 2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88; 
#=GS Q8B0H0/1650-1843  AC Q8B0H0
#=GS Q8B0H0/1650-1843  OS Vesicular stomatitis Indiana virus (strain 94GUB Central America)
#=GS Q8B0H0/1650-1843  DE RNA-directed RNA polymerase L
#=GS Q8B0H0/1650-1843  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Vesiculovirus; Indiana vesiculovirus; 
#=GS Q8B0H0/1650-1843  DR GO; GO:0039689; 
#=GS Q8B0H0/1650-1843  DR EC; 2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88; 
#=GS Q91DS4/1632-1835  AC Q91DS4
#=GS Q91DS4/1632-1835  OS 
#=GS Q91DS4/1632-1835  DE Large structural protein
#=GS Q91DS4/1632-1835  DR ORG; 
#=GF SQ 10
P03523/1648-1843          ----AHYKI--------RSILHGMGIHYRDFLSCGDGSGGMTAALLRENVHSRGIFNSLLELS-GSVMRGASPEPPSALETLGGDKSRCVNGETCWEYPSDLCDPRTWDYFLRLKAGLGLQIDLIVMDMEVRDSSTSLKIETNVRNYVH-------RILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTVDLVQTEFSSSQTSEVYMVCKGLKK-------
Q91DR9/1632-1835          ---GAHYKL--------RSLLKGMKIHYQDAIGCGDGSGGLSSCLLRENKHCRVIFNSLLELT-GNTLRGSTPDPPSAINGIPQIRDRCVNLNNVWEHPSDLSHPDTWKYFGELKAQFNMDVDLIVMDMEVQDIDISRRIEQNLRDHVH-------SLLSRHGTVIYKTYMTIMSENEKSVLDIVGVLFEDVQLCQTQYSSSQTSEVYCVMRRLRQKVDSQHV
O76726/98-310             -KNKAFLKLCEIFEVFKFDIFEGSSI--SSFHLC-EGPGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFDKLIDDSHIRPTMDQWYFGPSDDGDIEKFTEEYLIKQKLAGTFDLVTADGSTNTQGKEGEIESIVSSLISAEVEVALKLLRRNGRLILKTY-RFCAKSTRDVMNLLADNFSSIKAIKPMASRPGSSERYIVCDGFGGSM-----
Q8I931/97-253             CKNKAFLKLCEIFEVFKFDIFEGSSI--SSFHLC-EGPGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFDKLIDDSHIRPTMDQWYFGPSDDGDIEKFTEEYLIKQKLAGTFDLVTADGSTNTQGKEGEIESI------------------------KKW------------------------------SSDSENLSILCQKY---------
B7UCZ7/1648-1843          ----AHYKI--------RSILHGMGIHYRDFLSCGDGSGGMTAALLRENVHSRGIFNSLLELS-GSVMRGASPEPPSALETLGGDKSRCVNGETCWEYPSDLCDPRTWDYFLRLKAGLGLQIDLIVMDMEVRDSSTSLKIETNVRNYVH-------RILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTVDLVQTEFSSSQTSEVYMVCKGLKK-------
Q98776/1648-1843          ----AHYKI--------RSILHGMGIHYRDFLSCGDGSGGMTAALLRENVHSRGIFNSLLELS-GSVMRGASPEPPSALETLGGDKSRCVNGETCWEYPSDLCDPRTWDYFLRLKAGLGLQIDLIVMDMEVRDSSTSLKIETNVRNYVH-------RILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTVDLVQTEFSSSQTSEVYMVCKGLKK-------
Q8B0I0/1649-1843          -----HYKI--------RSILHGMGIHYRDFLSCGDGSGGMTAALLRENVHSRGIFNSLLELS-GSVMRGASPEPPSALETLGGDKSRCVNGETCWEHPSDLCDPRTWDYFLRLKAGLGLQIDLIVMDMEVRDSSTSLKIETNVRNYVH-------RILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTVDLVQTEFSSSQTSEVYMVCKGLKK-------
Q8B0H5/1657-1845          ---------------------HGMGIHYRDFLSCGDGSGGMTAALLRENVHSRGIFNSLLELS-GSVMRGASPEPPSALETLGGDRSRCVNGETCWEHPSDLCDPRTWDYFLRLKAGLGLQIDLIVMDMEVRDSSTSLKIESNVRNYVH-------RILDEQGVLIYKTYGTYICESEKNAVTILGPLFKTVDLVQTEFSSSQTSELYMVCKGLKKLI-----
Q8B0H0/1650-1843          ------YKI--------RSILHGMGIHYRDFLSCGDGSGGITAALLRENVHSRGIFNSLLELS-GSVMRGASPEPPSALETLGGDKSRCVNGETCWEHPSDLCDPRTWDYFLRLKAGLGLQIDLIVMDMEVRDYSASLKIETNVRNYVH-------RILDEQGVLIYKTYGTYICESEKNAVTILGPMFRTVDLVQTEFSSSQTSEVYMVCKSLKK-------
Q91DS4/1632-1835          ---GAHYKL--------RSLLKGMKIHYQDAIGCGDGSGGLSSCLLRENKHCRVIFNSLLELT-GNTLRGSTPDPPSAINGIPQIRDRCVNLNNVWEHPSDLSHPDTWKYFGELKAQFNMDVDLIVMDMEVQDIGISRRIEQNLRDHVH-------SLLSRHGTVIYKTYMTIMSENEKSVLDIVGVLFEDVQLCQTQYSSSQTSEVYCVMRRLRQKVDSQHV
#=GC scorecons            0001534750000000034554954933455439379694444665454466964465654540944445545755955547345444556354454499944654554443369547434599755945545353535994544334400000003352335245496614333444433334442252343434423567566746476445330000000
#=GC scorecons_70         _______*______________*__*_______*_**_*____**_____***_____*_____*________*__*____*________________***__*_________**__*____***__*___________**__________________________***______________________________**__**_*_*_____________
#=GC scorecons_80         _______*______________*__*_______*__*_*_____________*___________*________*__*_____________________***_____________*_______**___*___________**__________________________*_________________________________*_______*_____________
#=GC scorecons_90         ______________________*__*_______*__*_*_____________*___________*___________*_____________________***_____________*_______**___*___________**__________________________*_______________________________________________________
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