# STOCKHOLM 1.0
#=GF ID 3.40.50.1440/FF/000044
#=GF DE Tubulin alpha chain
#=GF AC 3.40.50.1440/FF/000044
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 97.899
#=GS A0D020/1-295  AC A0D020
#=GS A0D020/1-295  OS Paramecium tetraurelia
#=GS A0D020/1-295  DE Uncharacterized protein
#=GS A0D020/1-295  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEG5/1-347  AC Q3SEG5
#=GS Q3SEG5/1-347  OS Paramecium tetraurelia
#=GS Q3SEG5/1-347  DE Alpha tubulin,putative
#=GS Q3SEG5/1-347  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEH5/1-356  AC Q3SEH5
#=GS Q3SEH5/1-356  OS Paramecium tetraurelia
#=GS Q3SEH5/1-356  DE Alpha_tubulin,putative
#=GS Q3SEH5/1-356  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEH2/1-355  AC Q3SEH2
#=GS Q3SEH2/1-355  OS Paramecium tetraurelia
#=GS Q3SEH2/1-355  DE Alpha_tubulin,putative
#=GS Q3SEH2/1-355  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEH1/1-354  AC Q3SEH1
#=GS Q3SEH1/1-354  OS Paramecium tetraurelia
#=GS Q3SEH1/1-354  DE Alpha_tubulin,putative
#=GS Q3SEH1/1-354  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEF8/1-355  AC Q3SEF8
#=GS Q3SEF8/1-355  OS Paramecium tetraurelia
#=GS Q3SEF8/1-355  DE Tubulin alpha chain
#=GS Q3SEF8/1-355  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEH0/2-356  AC Q3SEH0
#=GS Q3SEH0/2-356  OS Paramecium tetraurelia
#=GS Q3SEH0/2-356  DE Putative alpha tubulin
#=GS Q3SEH0/2-356  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A0E9A7/1-336  AC A0E9A7
#=GS A0E9A7/1-336  OS Paramecium tetraurelia
#=GS A0E9A7/1-336  DE Uncharacterized protein
#=GS A0E9A7/1-336  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SEG7/1-352  AC Q3SEG7
#=GS Q3SEG7/1-352  OS Paramecium tetraurelia
#=GS Q3SEG7/1-352  DE Theta tubuline, putative
#=GS Q3SEG7/1-352  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SD83/1-259  AC Q3SD83
#=GS Q3SD83/1-259  OS Paramecium tetraurelia
#=GS Q3SD83/1-259  DE Beta tubulin,putative
#=GS Q3SD83/1-259  DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GF SQ 10
A0D020/1-295          MSSAFHIHIGGAGVMIGDMLW-KL---YEKEYNEA----------TQNNYIYEEVDGNHY-PLALFFDTDDGMIHEVQRNNSIKYKNHSFLH--GKEEAL-TYARGRYTVGKKVTKQAIDCIRKQIETMSRLDEFVITSSISGGTGSGCLSFLSIVLDEQFG-NKSKQNGFIIFPSSEMSNNVVGPYNAVFPIHTMIDHFQSITMFDNQSMYNVIDYQVELDFVDYQHLNNLVAQVISSYTGLRRFNNCDN---SKFLSNLCPYPSVHYLIPSYGKMTLINDYARTELQETQFIHYLTKKKCQLYQ--CPINPCLIKII------------------------------------------------------------------
Q3SEG5/1-347          MNQLITIHIGGAGSNIGSKLW------YNLSQHRQ----------EDLSSIFQENSHQSYKPRSIFVNTID---DQVPKYDEPQFSPNQFFY--TKEDTGNIYTVGHYCVAKDLIPKIQDEIRRQVENCDHFSGFLFTHSISGGFGSGYTTLLSSLLKNEY--QKSMSFSFCLMPSPNYRNNVIESYNSIMSLNSMVEAFDGVILLQNEAIYQIIENQLDIEFPSYNEVNQVITQPIIS---LLKFNQQQS--LQMLKLNLWNKNKLNIWSCSFGPLIN---YDQKHFSKKITSNSLKDIISQNSYICNKSKPNYKQAFLYAEQ-INQTLLSKTLSELVENKQYSIYQQGQEGQIKQFKEPFQQINSQ----KENLV--FIHKST
Q3SEH5/1-356          MSSAFHIHIGGAGVMMGDMLW-KL---YEKEHNET----------TLKNYVYQQVDGHSH-PLTLFADLDDRMISEVQRNKQIQFKKNSFLY--GKEEASNIYSRGCYTIGKEIIDKGLDQIRKQIETMDRLDQFVITTSIMGGTGSGFSTLLLQRLEVDYK-NKVKTNGFIIFPSSGMSNNILGIYNAMFSIQMTRNHFHSITMFDNQSMYNVIDQQLDLDYVDYSHLNNLVAQTISSYTGLRRFNNIDN---SKFFSGMCPYPNLHYFVPSYGKMTLINDYTRKELSQNEFIKYLTKKEIKLYQ--SPNNPQHLSTTLLFRQ-KEPNHFYGKFNQTLQNLSHVY---NQSPRIFQCNSSNYQVLSELAQMKQTGI--FFSNDA
Q3SEH2/1-355          MSSAFHIHIGGAGVMIGDMLW-QL---YEKEYNET----------NQKNYIYNEVDGNHY-PLALFVDTDDRMIHEVQRNKSVKFKKHSFLH--GKEDAL-TYARGCYDGGRLIQDEALECIRKQIETMDRLDEFVITSSISGGTGSGFCTRLVAELNWQGGYREVRKNGFIIFPSSEMSNNIIDTYNAVLSINIMREYLTSITIFDNQSMYNVIDHQLGLDFVDYQHLNNLVAQIISSYTGLRRFNSEDN---SEFFSNMCPYPHLQFIIPSYGKLTLMNDYNRKELESKQFIQYLTTKDQKLYQ--CPSNPNHILTTLLLRQ-QYLNPFFGKLDIIHKNLDYFF---GYRSDIFQCKSSNYQVLPELAEMKQTGT--FFSND-
Q3SEH1/1-354          MSSALHIHVGGAGIKMGDMLW-KL---YEKEYNET----------TQKNYIYDEFEGNHY-PQAFFVDTDDRMIHEVQRNQSVKFKKHSFFH--GTEDAS-TFARGLCTIGGGIEQQALDCIQKQIETMDRLDEFVITSSISGGTGSGFLSNLVSLLKIYY--RKVRCNGFIIFPSSKISNNVVAIYNAVLSMENLMYSFNSITMFDNESMYNFIDRQLDLDFVDYSQLNNLVAQIISAYTGIRRFNSEDN---SIFFKNLCPHPRLHFLIPSYSKMTLINDYARKELEQREFIQLLLKKDQKLYQ--CSTTPNYICTALLFRQ-KQLNPFYGKLDQALNNLNNYF---GQSSQIYQCKSSNYQVLPELAEMKQTGT--FFSNDT
Q3SEF8/1-355          MSSAIHLHIGGAGVMIGDALW-KL---YQKEQEET----------NVKSYIYNENDNNH--PLSMFIDLDDRMVNEIKKDKSVNYKSNSFVT--GKEDSSNNYCRAHYSIGKELVEKCLDNIRKQVESVGRIDSFIITSALSGGTGSGFTSLLLHRLYVEYG-EKVNRNAFLIYPSKEISNNTVDIYNAVLATRMTIEHCNSVVMLDNQSMYNTIDSQIGLDYVDYSHLNNLVCQIISSYTGLRRYSNIDN---GKLFTGLCPYPLIHYVIPSYGQLASINDQINKQLNEKQLIQQITKPAQRLFY--SEMKPEHICASFVHRS-QHQNKFFGQQDLTLQRMKIKY---QANPNVFQCQSKNYTVIPELAQLKQTAI--FLSNDA
Q3SEH0/2-356          TSSVIHLHIGGAGVMIGDALW-KL---YEKEESDT----------NVKSYIYNENENNNY-PLALFVDSDEQMINKVKKNQSIKYKSTSFVS--GKEDASNNFCRAFNAVGKQLIEQSLDQLRKQIESIDRLDQFIITSALSGGTGSGFAALLLERISKEYG-RKTQKNAFLVYPSQEMSNNIVDLYNVIYSIDLTLEDCHSVVMLDNQSMYESIDSQFGLDFVDYTLLNNLISQLISSYTGLRRFSQIDN---KKLLSGLCSYDRIHYITPSYGPLATINDQIKYELNEKQLISYITKPEQRLFQ--NKIKPYHLSAALVHRS-KGENQFFGQSDQAFQKMKIRY---QESPYVLQCISQNYTVIPELAQLKQTGV--FLSND-
A0E9A7/1-336          MQEIIIIGIGQCGISIGLEFIKQLNYDHCLNNHQE--LINQDRNRQKINVFFNENSRQQFLPRCLFLDLEPKSIDKLFIQKDELWKWQQLCT--------------------ELMDKCKHILDKYFEESGKLQGIMMFFSTGGGSGSGIASNLIQYFREKDP--TKIVHCNPIFSQG-ITHNCLEIYNTAFIMNSMIEIVDIVTVYDNVALQHIC--KINMLEQNYDIYNKILAESLIQTTASYRFPGFLNGGMKKLTLNLIPFPRLHFFQPSYMIINQ-----RD--------WNITNILNKQYKLCNFENNLPSEFLSYQIQLRGNCFEIPDSPSLLIR--------KDNIYQIPDLDTHYRVHTTVQHIDHENIVGFLGNS-
Q3SEG7/1-352          MSELIQLNAGWNSNEISLKYLEKLIQDHHLSQQQMNNRENKDQFFERISTCFEEHEKYRS-FRGVFLD-EQQSMDQILTMQDQGFIDPNYMI-GKNVYLDGTYYQGKNIFAQVYQQEFEDKLRQIYENSDQLFGCNLIHSLSDKF-CGISMQLMPSLES-----QLFFSSTSIFPNL-QSCSAIEIYNTILSLNQLIFNCNYCMVYDYNSLSKRVQEQ--YKYPTQSNCHDIIAETLLQNNCSMRFPGYQNGDLRKLAVNLISFPRMHFLSNAFCVISP-----SKILSNQ--IYKLTEPANQNFTFSEDAKNFYRMQATVSRT-KNLYYEIQESTSKCKNTTAWV---KDGFCNINCKVEHYELGDTVLYIGHH----------
Q3SD83/1-259          MGEIIQLSFGDIANNIGHQYLEKLIDDHCLDDKNN---STKDQYRQKIHVSFEELKTQQYQFRGIFVNSSDQSIHKLLISPESEYINNDLILENGNRNKSGTFSNSQLNFRDQIKDKLFEKLRHQIEKCDKFFGCQFAHSTYDYS-SGSSSVAIDSYKEGYP-YSPFCSSFSILPNI-VSSNTIEIYNTCFSMHKLIEYCDVVMLFDYGALENQLTKL--RQLSTLENCNNVIAECLLQMNCSQRFPGYQNGDQKKLSTNLIPFPRL----------------------------------------------------------------------------------------------------------------------
#=GC scorecons        7544546559456437733540570007345344300000000004335347483434440544595734534545633344336434463300444333145234232343353452362666559436563453554755654479434374325322310143224453757531465746559954555425443444545576366453532622444445334755666364535343884424700045633674556465432455324321222133242221132244322243430022234232122221320211212222221122311101000222112233221242312222123321200322220
#=GC scorecons_70     *_____*__*__*__**______*___*_______________________*_*___________*_*_____________________*_____________________________*_**___*____*_______*__*___**____*___________________*_*____*_*____**__________________*______________________*__*_*_*_______**____*_____*__**___*________________________________________________________________________________________________________________________
#=GC scorecons_80     *________*_____**__________________________________*_*___________*____________________________________________________________*____________*______**____*___________________*_*______*____**__________________*______________________*______________**____*_________*____________________________________________________________________________________________________________________________
#=GC scorecons_90     _________*___________________________________________*___________*____________________________________________________________*____________________*______________________________________**________________________________________________________**___________________________________________________________________________________________________________________________________________
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