# STOCKHOLM 1.0 #=GF ID 3.40.50.12650/FF/000007 #=GF DE DNA cross-link repair 1A protein, variant #=GF AC 3.40.50.12650/FF/000007 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 81.554 #=GS A0A0D1CBW9/631-803 AC A0A0D1CBW9 #=GS A0A0D1CBW9/631-803 OS Ustilago maydis 521 #=GS A0A0D1CBW9/631-803 DE Uncharacterized protein #=GS A0A0D1CBW9/631-803 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; #=GS Q7S2I1/754-878_931-943 AC Q7S2I1 #=GS Q7S2I1/754-878_931-943 OS Neurospora crassa OR74A #=GS Q7S2I1/754-878_931-943 DE DNA cross-link repair protein pso2/snm1 #=GS Q7S2I1/754-878_931-943 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; #=GS A0A0D0W474/600-767 AC A0A0D0W474 #=GS A0A0D0W474/600-767 OS Cryptococcus gattii EJB2 #=GS A0A0D0W474/600-767 DE Unplaced genomic scaffold supercont1.188, whole genome shotgun sequence #=GS A0A0D0W474/600-767 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; #=GS Q0TZD1/705-879 AC Q0TZD1 #=GS Q0TZD1/705-879 OS Parastagonospora nodorum SN15 #=GS Q0TZD1/705-879 DE Uncharacterized protein #=GS Q0TZD1/705-879 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; #=GS A0A0F7RUR6/639-808 AC A0A0F7RUR6 #=GS A0A0F7RUR6/639-808 OS Sporisorium scitamineum #=GS A0A0F7RUR6/639-808 DE Uncharacterized protein #=GS A0A0F7RUR6/639-808 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; #=GS R9P3Q0/636-805 AC R9P3Q0 #=GS R9P3Q0/636-805 OS Pseudozyma hubeiensis SY62 #=GS R9P3Q0/636-805 DE Uncharacterized protein #=GS R9P3Q0/636-805 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; #=GS A0A178A7L3/602-777 AC A0A178A7L3 #=GS A0A178A7L3/602-777 OS Stagonospora sp. SRC1lsM3a #=GS A0A178A7L3/602-777 DE DRMBL-domain-containing protein #=GS A0A178A7L3/602-777 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Massarineae; Massarinaceae; Stagonospora; Stagonospora sp. SRC1lsM3a; #=GS E6ZXY5/639-808 AC E6ZXY5 #=GS E6ZXY5/639-808 OS Sporisorium reilianum SRZ2 #=GS E6ZXY5/639-808 DE Uncharacterized protein #=GS E6ZXY5/639-808 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GS A0A1K0H507/646-815 AC A0A1K0H507 #=GS A0A1K0H507/646-815 OS Ustilago bromivora #=GS A0A1K0H507/646-815 DE Uncharacterized protein #=GS A0A1K0H507/646-815 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; #=GS Q5KDG6/580-745 AC Q5KDG6 #=GS Q5KDG6/580-745 OS Cryptococcus neoformans var. neoformans JEC21 #=GS Q5KDG6/580-745 DE Uncharacterized protein #=GS Q5KDG6/580-745 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; #=GS F7VKT5/771-896_955-967 AC F7VKT5 #=GS F7VKT5/771-896_955-967 OS Sordaria macrospora k-hell #=GS F7VKT5/771-896_955-967 DE WGS project CABT00000000 data, contig 2.1 #=GS F7VKT5/771-896_955-967 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria; Sordaria macrospora; #=GS A0A095D600/581-749 AC A0A095D600 #=GS A0A095D600/581-749 OS Cryptococcus gattii VGII R265 #=GS A0A095D600/581-749 DE DNA cross-link repair 1A protein #=GS A0A095D600/581-749 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; #=GS A0A0D0VRQ6/195-360 AC A0A0D0VRQ6 #=GS A0A0D0VRQ6/195-360 OS Cryptococcus gattii CA1280 #=GS A0A0D0VRQ6/195-360 DE Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence #=GS A0A0D0VRQ6/195-360 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; #=GS A0A226BBI2/583-749 AC A0A226BBI2 #=GS A0A226BBI2/583-749 OS Cryptococcus neoformans var. grubii Bt85 #=GS A0A226BBI2/583-749 DE DNA cross-link repair 1A protein #=GS A0A226BBI2/583-749 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS A0A2N8UAA5/639-808 AC A0A2N8UAA5 #=GS A0A2N8UAA5/639-808 OS Sporisorium reilianum f. sp. reilianum #=GS A0A2N8UAA5/639-808 DE Uncharacterized protein #=GS A0A2N8UAA5/639-808 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GS E6R8Z5/600-767 AC E6R8Z5 #=GS E6R8Z5/600-767 OS Cryptococcus gattii WM276 #=GS E6R8Z5/600-767 DE Uncharacterized protein #=GS E6R8Z5/600-767 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; #=GS A0A0D0U1P6/581-749 AC A0A0D0U1P6 #=GS A0A0D0U1P6/581-749 OS Cryptococcus gattii VGII Ram5 #=GS A0A0D0U1P6/581-749 DE Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence #=GS A0A0D0U1P6/581-749 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; #=GS J9VSN0/582-748 AC J9VSN0 #=GS J9VSN0/582-748 OS Cryptococcus neoformans var. grubii H99 #=GS J9VSN0/582-748 DE DNA cross-link repair 1A protein, variant #=GS J9VSN0/582-748 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS A0A225Y8F7/582-749 AC A0A225Y8F7 #=GS A0A225Y8F7/582-749 OS Cryptococcus neoformans var. grubii c45 #=GS A0A225Y8F7/582-749 DE DNA cross-link repair 1A protein #=GS A0A225Y8F7/582-749 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS Q55PZ9/578-745 AC Q55PZ9 #=GS Q55PZ9/578-745 OS Cryptococcus neoformans var. neoformans B-3501A #=GS Q55PZ9/578-745 DE Uncharacterized protein #=GS Q55PZ9/578-745 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; #=GS A0A0B0DP78/754-878_931-943 AC A0A0B0DP78 #=GS A0A0B0DP78/754-878_931-943 OS Neurospora crassa #=GS A0A0B0DP78/754-878_931-943 DE DRMBL-domain-containing protein #=GS A0A0B0DP78/754-878_931-943 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; #=GF SQ 21 A0A0D1CBW9/631-803 -----SNWLTKHTELSREAASSMRRRDGGRLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELHSMLTRSP-LASVHVTNLHAINGEALRDVVAALRTHGHDFTHAVAFRPTGWTYKPPAGMDTVSPSLDRLIQ-WNQSRSFTFHNLLPTRDSTPDYMIYGVPYSEH Q7S2I1/754-878_931-943 ------------PNAFTALT-SSSTIRKNRLLVVCGTYSIGKERICVAIAQALRSKIFA-SPSKIRITKQLDDPELSSLMTADPREAQVHMQALGEIRADTLAEYLELHRSNG--FSRIVGFRPSGWSYRPGSGSNN-----------------------NQNSGSGREAMCFGVPY--- A0A0D0W474/600-767 ------KKKDRVKEEVKEESGQVGKKAKSRTLVVVGTYSIGKERIVKAIAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLLYPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQARRFGEGDLKTMRGSSRNFMMYGVPYSEH Q0TZD1/705-879 -RAGQGMVKFVRKDSNADNPEQPKSPERGRLLVVVGTYSIGKERICVGIAKALGSKIFA-PANKQRICAALEDPELNALLTKDPRAAQVHMTPLFEIRADTLDDYMRNYADT---FSRCVGFRPSGWNYRPPNSRFTESPAVQTVLHSQNWKSAFSMKDLTPQRGSTSRASCFGVPYSEH A0A0F7RUR6/639-808 --------LTKHSESSREAVSLMRRRDGGRLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELHSLLTRSP-SASVHVTNLHAINGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPPAGMDTVSPSLDRLIQ-WNQSRSFGFQNLYPTRDSTPDYMIYGVPYSEH R9P3Q0/636-805 --------LTKHSETSRDAVSSMRRRDGGRLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELHSMLTRSP-SASVHVTNLHAINGEGLRDVVAALRTRGHDFTHAVAFRPTGWTYKPPAGMDTVSPSLDRLIQ-WNQSRSFGFQNLYPTRDSTPDYMIYGVPYSEH A0A178A7L3/602-777 ERAGQGMVKFVRKDSNTDTTEEPRSPARGRLLVVVGTYSIGKERICVGIAKALGSKIFA-PPNKQRICAALEDSELNALLTKDPRAAQVHMTPLFEIRADTLDDYLRDYADT---YSRCVGFRPSGWNYRPPNSRFTESPAVQTVLHSQNWKSSFSMKDLTPQRGSTSRASCFGVPYSEH E6ZXY5/639-808 --------LAKHSESSRDAVSSMRRRDGGRLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELHSLLTRSP-SASVHVTNLHAINGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPPAGLDTVSPSLDRLIQ-WNQARSFGCQNLYPTRDSTPDYMIYGVPYSEH A0A1K0H507/646-815 --------LTKHSESSRDAVSGLRRRDGGRLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELHSLLTRSP-SASVHVANLHAINGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPSAGMDTVSPSLDRLIQ-WNQSRSFGPHNLFPTRDSTPDYMIYGVPYSEH Q5KDG6/580-745 --------EEGVKEEVKEELGGVGKRAKSRTLVVVGTYSIGKERIVKAVAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLLHPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTIIR-RDQARRFGEGDLKTMRGSSRNFMMYGVPYSEH F7VKT5/771-896_955-967 ------------SNAFTALTSSSSSFRKNRLLVVCGTYSIGKERICVAIAQALGSKIFA-SPSKIRITKQLGDAELFGLMTSDPREAQVHMQALGEIRADTLAEYLELHRSNG--FSRIVGFRPSGWSYRPGSGSNN-----------------------NNNNGSGKEAMCFGVPY--- A0A095D600/581-749 -----VKKEEKVKEEVKEESGQVGKRAKSRTLVVVGTYSIGKERIVKAIAKAVASKIYC-DQRKKGILLCQTDPELHFMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLFYPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQARRFGEQDLKTMRGSSRNFMMYGVPYSEH A0A0D0VRQ6/195-360 -----VKKEERVKEEVKEESGQVGKRANSRTLVAVGTYSIGKERIVKAIAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLNLLYPH---FDRVLGFRPTGWSYSSPAGTDML-PDVNTVIR-RDQARRFGEGDLKTMRGSSRNFMMYGVPY--- A0A226BBI2/583-749 -------KEEGVKEEVKEDLGEVGKRVKGRTLVVVGTYSIGKERIVKAVAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPTEAQVHLLPLGNIQLDRLQSYLTLLHPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQAKRFGEGDLKTMRGSNRNFMMYGVPYSEH A0A2N8UAA5/639-808 --------LAKHSESSRDAVSSMRRRDGGRLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELHSLLTRSP-SASVHVTNLHAINGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPPAGLDTVSPSLDRLIQ-WNQARSFGCQNLYPTRDSTPDYMIYGVPYSEH E6R8Z5/600-767 ------KKKDRVKEEVKEESGQVGKKAKSRTLVVVGTYSIGKERIVKAIAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLLYPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQARRFGEGDLKTMRGSSRNFMMYGVPYSEH A0A0D0U1P6/581-749 -----VKKEEKVKEEVKEESGQVGKRAKSRTLVVVGTYSIGKERIVKAIAKAVGSKIYC-DQRKKGILLCQTDPELHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLFYPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQARRFGEQDLKTMRGSSRNFMMYGVPYSEH J9VSN0/582-748 -------KEEGVKEEVKEDLGEVGKRVKGRTLVVVGTYSIGKERIVKAVAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPTEAQVHLLPLGNIQLDRLQSYLTLLHPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQAKRFGEGDLKTMRGSNRNFMMYGVPYSEH A0A225Y8F7/582-749 ------KKEEGVKEEVKEDLGEVGKRVKGRTLVVVGTYSIGKERIVKAVAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPTEAQVHLLPLGNIQLDRLQSYLTLLHPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTVIR-RDQAKRFGEGDLKTMRGSNRNFMMYGVPYSEH Q55PZ9/578-745 ------KKEERVKEEVKEELGGVGKRAKSRTLVVVGTYSIGKERIVKAVAKAIGSKIYC-DQRKKGILLCQTDPELHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLLHPH---FDRVLGFRPTGWSYSPPAGTDML-PDVNTIIR-RDQARRFGEGDLKTMRGSSRNFMMYGVPYSEH A0A0B0DP78/754-878_931-943 ------------PNAFTALT-SSSTIRKNRLLVVCGTYSIGKERICVAIAQALRSKIFA-SPSKIRITKQLDDPELSSLMTADPREAQVHMQALGEIRADTLAEYLELHRSNG--FSRIVGFRPSGWSYRPGSGSNN-----------------------NQNSGSGREAMCFGVPY--- #=GC scorecons 000000012222464445343444443559599859996999999557796955999750545936734454979956679469249699545944954749455644544420084646699969959586674543153433343034434354224534466944547479999555 #=GC scorecons_70 _____________*_______________*_***_**********__***_*__****_____*__*_____****_****_**__*_**___*__*__*_*___*_________*_*_********_*_**_*_____________________________***____*_*****___ #=GC scorecons_80 _____________________________*_***_***_******__*_*_*__****_____*__*_____****___**__*__*_**___*__*__*_*_____________*_____***_**_*_*__*_______________________________*____*_*****___ #=GC scorecons_90 _____________________________*_***_***_******____*_*__***______*________*_**____*__*__*_**___*__*____*_____________*_____***_**_*_*__________________________________*_______****___ //