# STOCKHOLM 1.0
#=GF ID 3.40.50.11580/FF/000002
#=GF DE Replicase polyprotein 1ab
#=GF AC 3.40.50.11580/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 21.942
#=GS 2gtiA02/65-195        AC Q9J3E8
#=GS 2gtiA02/65-195        OS Murine hepatitis virus
#=GS 2gtiA02/65-195        DE RNA-directed RNA polymerase
#=GS 2gtiA02/65-195        DR CATH; 2gti; A:64-194; 
#=GS 2gtiA02/65-195        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X8/6515-6645      AC P0C6X8
#=GS P0C6X8/6515-6645      OS Murine hepatitis virus strain 2
#=GS P0C6X8/6515-6645      DE Replicase polyprotein 1ab
#=GS P0C6X8/6515-6645      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X8/6515-6645      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS 2gthA02/65-195        AC Q9J3E8
#=GS 2gthA02/65-195        OS Murine hepatitis virus
#=GS 2gthA02/65-195        DE RNA-directed RNA polymerase
#=GS 2gthA02/65-195        DR CATH; 2gth; A:64-194; 
#=GS 2gthA02/65-195        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS A0A096XNH7/6434-6564  AC A0A096XNH7
#=GS A0A096XNH7/6434-6564  OS Longquan Rl rat coronavirus
#=GS A0A096XNH7/6434-6564  DE Orf1ab polyprotein
#=GS A0A096XNH7/6434-6564  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Longquan Rl rat coronavirus; 
#=GS P0C6Y0/6571-6701      AC P0C6Y0
#=GS P0C6Y0/6571-6701      OS Murine hepatitis virus strain JHM
#=GS P0C6Y0/6571-6701      DE Replicase polyprotein 1ab
#=GS P0C6Y0/6571-6701      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6Y0/6571-6701      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6X9/6567-6697      AC P0C6X9
#=GS P0C6X9/6567-6697      OS Murine hepatitis virus strain A59
#=GS P0C6X9/6567-6697      DE Replicase polyprotein 1ab
#=GS P0C6X9/6567-6697      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X9/6567-6697      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS I7AWB5/6572-6702      AC I7AWB5
#=GS I7AWB5/6572-6702      OS Murine coronavirus
#=GS I7AWB5/6572-6702      DE Polyprotein ORF1ab
#=GS I7AWB5/6572-6702      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C6GHR8/6563-6693      AC C6GHR8
#=GS C6GHR8/6563-6693      OS Rat coronavirus Parker
#=GS C6GHR8/6563-6693      DE Orf1ab polyprotein
#=GS C6GHR8/6563-6693      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS Q9J3E8/2124-2254      AC Q9J3E8
#=GS Q9J3E8/2124-2254      OS Murine hepatitis virus
#=GS Q9J3E8/2124-2254      DE RNA-directed RNA polymerase
#=GS Q9J3E8/2124-2254      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYS9/2124-2254      AC C0KYS9
#=GS C0KYS9/2124-2254      OS Murine coronavirus RA59/SJHM
#=GS C0KYS9/2124-2254      DE ORF1b polyprotein
#=GS C0KYS9/2124-2254      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYQ9/2124-2254      AC C0KYQ9
#=GS C0KYQ9/2124-2254      OS Murine coronavirus RA59/R13
#=GS C0KYQ9/2124-2254      DE ORF1b polyprotein
#=GS C0KYQ9/2124-2254      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS Q7M006/851-976        AC Q7M006
#=GS Q7M006/851-976        OS Murine hepatitis virus
#=GS Q7M006/851-976        DE RNA-directed RNA polymerase
#=GS Q7M006/851-976        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GF SQ 12
2gtiA02/65-195                RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSXIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
P0C6X8/6515-6645              RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRDGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAMRRDGDDVIFSRTGSLEPSH
2gthA02/65-195                RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
A0A096XNH7/6434-6564          RHHPELKLFRNLNIDVCWNHVLWDYVKDSVFCSSTYKVCKYTDIKCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMSKGPQRAELNGVIVEKVGDSDVEFWFAMRKDGDDVIFSRAGSLEPSH
P0C6Y0/6571-6701              RPHPELKLFRSSNIHVCWNHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAMRRDGDDVIFSRTGSLEPSH
P0C6X9/6567-6697              RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
I7AWB5/6572-6702              RPHPELKLFRNLNIDVCWNHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAMRRDGDDVIFSRTGSLEPSH
C6GHR8/6563-6693              RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKNLSMIKGPQRADLNGVVVEKVGDSDVEFWFAMRSDGDDVIFSRTESLEPSH
Q9J3E8/2124-2254              RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
C0KYS9/2124-2254              RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
C0KYQ9/2124-2254              RPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
Q7M006/851-976                VSH-----MCKCGIDVCWSHVLWDYAKDSVFCSSTYKVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH
#=GC scorecons                55955555665469799969999997999999999999999997799999999999999999999999989999999999899779999998999989999999999999969699999999978999999
#=GC scorecons_70             __*_____**__***********************************************************************************************************************
#=GC scorecons_80             __*__________*****_*****************************************************************_**************************_*_*****************
#=GC scorecons_90             __*__________*_***_******_*****************__***********************************_**__******_****_**************_*_*********__******
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