# STOCKHOLM 1.0
#=GF ID 3.40.50.10810/FF/000076
#=GF DE ATP-dependent helicase ULS1
#=GF AC 3.40.50.10810/FF/000076
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 34.399
#=GS Q08562/912-1057_1089-1217      AC Q08562
#=GS Q08562/912-1057_1089-1217      OS Saccharomyces cerevisiae S288C
#=GS Q08562/912-1057_1089-1217      DE ATP-dependent helicase ULS1
#=GS Q08562/912-1057_1089-1217      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q08562/912-1057_1089-1217      DR GO; GO:0000778; GO:0005634; GO:0005730; GO:0005737; GO:0005739; GO:0006333; GO:0007533; GO:0008094; GO:0032183; GO:2001033; 
#=GS Q75EC7/866-1010_1048-1173      AC Q75EC7
#=GS Q75EC7/866-1010_1048-1173      OS Eremothecium gossypii ATCC 10895
#=GS Q75EC7/866-1010_1048-1173      DE AAR147Wp
#=GS Q75EC7/866-1010_1048-1173      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS J8PYZ0/912-1056_1088-1216      AC J8PYZ0
#=GS J8PYZ0/912-1056_1088-1216      OS Saccharomyces arboricola H-6
#=GS J8PYZ0/912-1056_1088-1216      DE Uls1p
#=GS J8PYZ0/912-1056_1088-1216      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GNR6/912-1057_1089-1217      AC H0GNR6
#=GS H0GNR6/912-1057_1089-1217      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GNR6/912-1057_1089-1217      DE Uls1p
#=GS H0GNR6/912-1057_1089-1217      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VH54/912-1057_1089-1217  AC A0A0L8VH54
#=GS A0A0L8VH54/912-1057_1089-1217  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VH54/912-1057_1089-1217  DE ULS1p Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL)
#=GS A0A0L8VH54/912-1057_1089-1217  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RB82/913-1058_1089-1217  AC A0A0L8RB82
#=GS A0A0L8RB82/913-1058_1089-1217  OS Saccharomyces eubayanus
#=GS A0A0L8RB82/913-1058_1089-1217  DE ULS1-like protein
#=GS A0A0L8RB82/913-1058_1089-1217  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS B3LJM1/912-1057_1089-1217      AC B3LJM1
#=GS B3LJM1/912-1057_1089-1217      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LJM1/912-1057_1089-1217      DE SWI2/SNF2 DNA-dependent ATPase family member
#=GS B3LJM1/912-1057_1089-1217      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1NYL4/560-704_736-864         AC N1NYL4
#=GS N1NYL4/560-704_736-864         OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1NYL4/560-704_736-864         DE Uls1p
#=GS N1NYL4/560-704_736-864         DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WN64/912-1057_1089-1217      AC G2WN64
#=GS G2WN64/912-1057_1089-1217      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WN64/912-1057_1089-1217      DE K7_Ris1p
#=GS G2WN64/912-1057_1089-1217      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZGV1/912-1057_1089-1217      AC C8ZGV1
#=GS C8ZGV1/912-1057_1089-1217      OS Saccharomyces cerevisiae EC1118
#=GS C8ZGV1/912-1057_1089-1217      DE Uls1p
#=GS C8ZGV1/912-1057_1089-1217      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZP36/912-1057_1089-1217      AC A6ZP36
#=GS A6ZP36/912-1057_1089-1217      OS Saccharomyces cerevisiae YJM789
#=GS A6ZP36/912-1057_1089-1217      DE Member of the SWI/SNF family of DNA-dependent ATPases
#=GS A6ZP36/912-1057_1089-1217      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VS75/502-643_675-803         AC B5VS75
#=GS B5VS75/502-643_675-803         OS Saccharomyces cerevisiae AWRI1631
#=GS B5VS75/502-643_675-803         DE YOR191Wp-like protein
#=GS B5VS75/502-643_675-803         DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 12
Q08562/912-1057_1089-1217              QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
Q75EC7/866-1010_1048-1173              -QSLNELLESLKQAETSIDGEELTPPDMTVNLLKHQRQGLYWLLKTESSKFKGGLLADDMGLGKTVQAIALMLANRSADSTCKTNLVVGPVAVLRVWHDEINTKVKKQAQFSVMIYGGFGGKKVENFKAMHNYDVVLVSYQTLAVE----WSPFFSDDSNFYRIILDEAQNIKNKQTQAAKACCTLNGTYRWALSGTPIQNNILELYSLLRFLRIAPYNREQKFKEDIGNALL-SRGGDFDSMDTKRALKKVRVLLRAIMLRRAKTSQINGQPILEL
J8PYZ0/912-1056_1088-1216              -EQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLSNRSEIQKCKTNLIVAPVSVLRVWKGELETKVKKNAKFNTFIFGGSGNGKVKHWKDLARYDAVLVSYQTLANE-REYYSPFYCNESTFYRVLLDEGQNIKNKNTRASKACCTISSIYRWILSGTPIQNSMDELYSLLRFLKIPPYHKEQRFKLDIGRFFQKNKQYEYDNEDRKNALRKIRVLLNAIMLRRSKTDKIDGKPLLE-
H0GNR6/912-1057_1089-1217              QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
A0A0L8VH54/912-1057_1089-1217          QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
A0A0L8RB82/913-1058_1089-1217          QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVESSAKKGGLLADDMGLGKTIQAIALMLENRSEDHKCRTNLIVAPVSVLRVWKGEIETKVKKRAKFNTFIFGGAGNGKVKHWKDLARYDAVLVSYQTLANERNEYYSPFYCNDSMFYRVLLDEGQNIKNKNTRASKACCTINSMYRWILSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQKNKQYEYDNEDRKNALKKVRVLLNAIMLRRSKADKIDGEPLL--
B3LJM1/912-1057_1089-1217              QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
N1NYL4/560-704_736-864                 -EQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
G2WN64/912-1057_1089-1217              QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
C8ZGV1/912-1057_1089-1217              QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
A6ZP36/912-1057_1089-1217              QEQIRALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
B5VS75/502-643_675-803                 ----RALLENVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAILVSYQTLANE-NEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLE-
#=GC scorecons                         1545559995699595599995999499999999999499699965959539999999999999969999999699955659899969599599999559659999959694559799495599555656459958999999994903335999756895999769995999999596959999967659995999999995649999969998959956996994999546435654579549595996989999599999959656969596970
#=GC scorecons_70                      ______***_***_*__****_***_***********_*******_*_*__**************************__*_*******_**_*****__*__*****_***___****_*__**___*_*__**_*********_*_____****_***_********_******_***_********_***_********_*_*****_*****_**_******_***__*___*___**__*_*_*********_******_*__****_****_
#=GC scorecons_80                      ______***__**_*__****_***_***********_**_***__*_*__**************_*******_***____*****_*_**_*****__*__*****_*_*___****_*__**________**_*********_*_____****__**_****_***_******_*_*_*****_*__***_********___*****_*****_**__**_**_***__________**__*_*_**_******_******_*___*_*_*_*__
#=GC scorecons_90                      ______***__**_*__****_***_***********_**_***__*_*__**************_*******_***____*****_*_**_*****__*__*****_*_*___*_**_*__**________**_*********_*_____***___**_***__***_******_*_*_*****____***_********___*****_*****_**__**_**_***___________*__*_*_**_******_******_*___*_*_*_*__
//