# STOCKHOLM 1.0
#=GF ID 3.40.50.10130/FF/000011
#=GF DE Crossover junction endonuclease MUS81
#=GF AC 3.40.50.10130/FF/000011
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.801
#=GS P87231/326-473      AC P87231
#=GS P87231/326-473      OS Schizosaccharomyces pombe 972h-
#=GS P87231/326-473      DE Crossover junction endonuclease mus81
#=GS P87231/326-473      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS P87231/326-473      DR GO; GO:0000709; GO:0000712; GO:0000724; GO:0000737; GO:0005515; GO:0005634; GO:0005739; GO:0006301; GO:0006302; GO:0007131; GO:0008821; GO:0010520; GO:0031297; GO:0031573; GO:0033314; GO:0048476; 
#=GS Q04149/350-493      AC Q04149
#=GS Q04149/350-493      OS Saccharomyces cerevisiae S288C
#=GS Q04149/350-493      DE Crossover junction endonuclease MUS81
#=GS Q04149/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q04149/350-493      DR GO; GO:0000712; GO:0000727; GO:0004857; GO:0005515; GO:0005634; GO:0006265; GO:0006974; GO:0007131; GO:0048476; GO:0051097; 
#=GS Q551H0/631-800      AC Q551H0
#=GS Q551H0/631-800      OS Dictyostelium discoideum
#=GS Q551H0/631-800      DE Probable crossover junction endonuclease mus81
#=GS Q551H0/631-800      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS F0ZL61/412-576      AC F0ZL61
#=GS F0ZL61/412-576      OS Dictyostelium purpureum
#=GS F0ZL61/412-576      DE Uncharacterized protein
#=GS F0ZL61/412-576      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS Q59NG5/316-469      AC Q59NG5
#=GS Q59NG5/316-469      OS Candida albicans SC5314
#=GS Q59NG5/316-469      DE Crossover junction endonuclease MUS81
#=GS Q59NG5/316-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q754C9/317-464      AC Q754C9
#=GS Q754C9/317-464      OS Eremothecium gossypii ATCC 10895
#=GS Q754C9/317-464      DE Crossover junction endonuclease MUS81
#=GS Q754C9/317-464      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XI78/317-464      AC R9XI78
#=GS R9XI78/317-464      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XI78/317-464      DE AaceriAFR141Cp
#=GS R9XI78/317-464      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS B9WID7/316-469      AC B9WID7
#=GS B9WID7/316-469      OS Candida dubliniensis CD36
#=GS B9WID7/316-469      DE Crossover junction endonuclease, putative
#=GS B9WID7/316-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS H0GEJ8/350-493      AC H0GEJ8
#=GS H0GEJ8/350-493      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GEJ8/350-493      DE Mus81p
#=GS H0GEJ8/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VTR4/350-493  AC A0A0L8VTR4
#=GS A0A0L8VTR4/350-493  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VTR4/350-493  DE MUS81p Subunit of structure-specific Mms4p-Mus81p endonuclease
#=GS A0A0L8VTR4/350-493  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS C7GSD6/350-493      AC C7GSD6
#=GS C7GSD6/350-493      OS Saccharomyces cerevisiae JAY291
#=GS C7GSD6/350-493      DE Mus81p
#=GS C7GSD6/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P8S9/350-493      AC N1P8S9
#=GS N1P8S9/350-493      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P8S9/350-493      DE Mus81p
#=GS N1P8S9/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LFR4/350-493      AC B3LFR4
#=GS B3LFR4/350-493      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LFR4/350-493      DE Class II crossover junction endonuclease MUS81
#=GS B3LFR4/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z5V0/350-493      AC C8Z5V0
#=GS C8Z5V0/350-493      OS Saccharomyces cerevisiae EC1118
#=GS C8Z5V0/350-493      DE Mus81p
#=GS C8Z5V0/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZYY7/350-493      AC A6ZYY7
#=GS A6ZYY7/350-493      OS Saccharomyces cerevisiae YJM789
#=GS A6ZYY7/350-493      DE MMS and UV sensitive protein
#=GS A6ZYY7/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WBC6/350-493      AC G2WBC6
#=GS G2WBC6/350-493      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WBC6/350-493      DE K7_Mus81p
#=GS G2WBC6/350-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 16
P87231/326-473              ---SNCTVFLLIDTREIRSPLDRNLIIDKLTNDFGVNCQVRSLELGDALWVARDMESGQEVVLDFVVERKRYDDLVASIKDGRFHEQKARLKKSGIRSVTYILEESSY--DE--SFT----------------ESIRTAVSNTQVDQLFHVRHTRSLEHSVSLLAEMTKQI-------
Q04149/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
Q551H0/631-800              ----FKNIKCIIDNREVKSVTERDYICNKLNER-GINAQVKKLELGDFVWVAID-EHDNEWLLNYIIERKRVDDLSSSIIDGRYKEQKFRLSKSGCDNIIYLIEGIVS--NTINSSSQSQKKTWGTVNFSLSPDALATALVTTSICEGIIIKETKTIDNTIDYIVNITEYFKEKLLKN
F0ZL61/412-576              ----FKEIKCFIDNREVKSVTERDYIVNKLKNN-GINAEIKKLELGDFIWVAID-EKGEEWLLDYIMERKRIDDLSSSIMDGRYKEQKFRLKKTGCNNIIYLVEGVLS--NNIMASQQYKK--WGSVNFGLSPDALASALVSTQINDDITIKQTISLEETIEYITFTTEYFKDKL---
Q59NG5/316-469              WRKEDYEVIVYMDNREIRSRADRDHFQTRLQTL-GVKCEVKPLSSGDVLWVGRNTSTGTEAVLNYLCERKRLDDLCDSIKDGRFQEQKNRMKKTGIKHCYYLVEDMVSYQDKVYDLM----------------DSIQSSLTQTMTTARLYLRRFKDIDETTAFIASNTKVI-------
Q754C9/317-464              ---GSYDIELYIDHREVRAKSERDFFVNALLTR-GVTVEGKALALGDMVWVARHRDSRSTCVLNFMLERKRLDDLAMSIRDNRFMEQKNRLKKTGCKHIFYLVEETSG--TNVAGME----------------GAIKTSIWMTYVYSGFHVKRTRNADDTVEWLHDMTCT--------
R9XI78/317-464              ---GSYDIELYIDHREVRAKSERDFFVNALLTR-GVNVEGKALALGDMVWVARHKDSRSACVLNFMLERKRLDDLAMSIRDNRFMEQKNRLKKTGCKHIFYLVEETSG--TNVAGME----------------EAIKTSIWMTYVYSGFHVKRTRNADDTVEWLHDMTST--------
B9WID7/316-469              WRKEDYEVIVYMDNREIRSRADRDHFQNRLQTL-GVKCEVKPLSSGDVLWVGRNTSTGTEAVLNYLCERKRLDDLYDSIKDGRFQEQKNRMKKTGLKHCYYLVEDMVSYQDKVSNLM----------------DSIQSSLTQTMTTARLYLRRFKDIDETTAFIASNTKVI-------
H0GEJ8/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
A0A0L8VTR4/350-493          -------VFPIIDHREIKSQSDREFFSRAFERK-RMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
C7GSD6/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
N1P8S9/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
B3LFR4/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
C8Z5V0/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
A6ZYY7/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCDHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
G2WBC6/350-493              -------VFPIIDHREIKSQSDREFFSRAFERK-GMKSEIRQLALGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCDHKYYLIEETMS--GNIGNMN----------------EALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTV--------
#=GC scorecons              0000111733479599777357965634563440865475749469946997553456354797464999969994399595974999597596954635986964460045534430000000000000000666566733636434535466354768653743453410000000
#=GC scorecons_70           _______*___**_*****__***_*___*____*___*_*_*_***__***_____*___***___****_***__**_*_**_***_**_*_*_____****___*_________________________***_***____________**___*_*___*______________
#=GC scorecons_80           _______*___**_***_*__**___________*___*___*__**__***_________***___****_***__**_*_**_***_**_*_*_____**_*_____________________________________________________*_*__________________
#=GC scorecons_90           ____________*_**______*___________*_______*__**__**___________*____****_***__**_*_*__***_*__*_*_____**_*__________________________________________________________________________
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