# STOCKHOLM 1.0
#=GF ID 3.40.50.1010/FF/000046
#=GF DE RAD2p Single-stranded DNA endonuclease
#=GF AC 3.40.50.1010/FF/000046
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.535
#=GS P07276/1-137      AC P07276
#=GS P07276/1-137      OS Saccharomyces cerevisiae S288C
#=GS P07276/1-137      DE DNA repair protein RAD2
#=GS P07276/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P07276/1-137      DR GO; GO:0000014; GO:0000112; GO:0005515; GO:0006295; GO:0006366; 
#=GS A0A1D8PLU8/1-141  AC A0A1D8PLU8
#=GS A0A1D8PLU8/1-141  OS Candida albicans SC5314
#=GS A0A1D8PLU8/1-141  DE SsDNA endodeoxyribonuclease
#=GS A0A1D8PLU8/1-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A1D8PLU8/1-141  DR GO; GO:0000014; GO:0000112; GO:0006295; GO:0034644; 
#=GS A0A0D1DU59/1-141  AC A0A0D1DU59
#=GS A0A0D1DU59/1-141  OS Ustilago maydis 521
#=GS A0A0D1DU59/1-141  DE Uncharacterized protein
#=GS A0A0D1DU59/1-141  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS E3L438/77-225     AC E3L438
#=GS E3L438/77-225     OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS E3L438/77-225     DE Uncharacterized protein
#=GS E3L438/77-225     DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS Q5KPE3/1-155      AC Q5KPE3
#=GS Q5KPE3/1-155      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KPE3/1-155      DE Single-stranded DNA specific endodeoxyribonuclease, putative
#=GS Q5KPE3/1-155      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A077R681/1-142  AC A0A077R681
#=GS A0A077R681/1-142  OS Melanopsichium pennsylvanicum 4
#=GS A0A077R681/1-142  DE Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome
#=GS A0A077R681/1-142  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Melanopsichium; Melanopsichium pennsylvanicum; 
#=GS Q754D7/1-138      AC Q754D7
#=GS Q754D7/1-138      OS Eremothecium gossypii ATCC 10895
#=GS Q754D7/1-138      DE AFR133Cp
#=GS Q754D7/1-138      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS E6R0K2/1-157      AC E6R0K2
#=GS E6R0K2/1-157      OS Cryptococcus gattii WM276
#=GS E6R0K2/1-157      DE Single-stranded DNA specific endodeoxyribonuclease, putative
#=GS E6R0K2/1-157      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS B9WG42/1-137      AC B9WG42
#=GS B9WG42/1-137      OS Candida dubliniensis CD36
#=GS B9WG42/1-137      DE DNA-repair protein RAD2 orthologue, putative
#=GS B9WG42/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS J8PNE1/1-132      AC J8PNE1
#=GS J8PNE1/1-132      OS Saccharomyces arboricola H-6
#=GS J8PNE1/1-132      DE Rad2p
#=GS J8PNE1/1-132      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS A0A0L8VPR2/1-137  AC A0A0L8VPR2
#=GS A0A0L8VPR2/1-137  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VPR2/1-137  DE RAD2p Single-stranded DNA endonuclease
#=GS A0A0L8VPR2/1-137  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS H0GGY8/1-137      AC H0GGY8
#=GS H0GGY8/1-137      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GGY8/1-137      DE Rad2p
#=GS H0GGY8/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0D0XQ93/1-157  AC A0A0D0XQ93
#=GS A0A0D0XQ93/1-157  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0XQ93/1-157  DE Unplaced genomic scaffold supercont2.4, whole genome shotgun sequence
#=GS A0A0D0XQ93/1-157  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS A0A226A103/1-157  AC A0A226A103
#=GS A0A226A103/1-157  OS Cryptococcus neoformans var. grubii c45
#=GS A0A226A103/1-157  DE DNA repair protein rad13
#=GS A0A226A103/1-157  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS C4YHA8/1-142      AC C4YHA8
#=GS C4YHA8/1-142      OS Candida albicans WO-1
#=GS C4YHA8/1-142      DE Uncharacterized protein
#=GS C4YHA8/1-142      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS N1P444/1-137      AC N1P444
#=GS N1P444/1-137      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P444/1-137      DE Rad2p
#=GS N1P444/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z9F0/1-137      AC C8Z9F0
#=GS C8Z9F0/1-137      OS Saccharomyces cerevisiae EC1118
#=GS C8Z9F0/1-137      DE Rad2p
#=GS C8Z9F0/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WEY4/1-137      AC G2WEY4
#=GS G2WEY4/1-137      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WEY4/1-137      DE K7_Rad2p
#=GS G2WEY4/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZUR7/1-137      AC A6ZUR7
#=GS A6ZUR7/1-137      OS Saccharomyces cerevisiae YJM789
#=GS A6ZUR7/1-137      DE Radiation sensitive protein
#=GS A6ZUR7/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GNH3/1-137      AC C7GNH3
#=GS C7GNH3/1-137      OS Saccharomyces cerevisiae JAY291
#=GS C7GNH3/1-137      DE Rad2p
#=GS C7GNH3/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 20
P07276/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
A0A1D8PLU8/1-141          MGVHSLWKIVGPTARPVRLEALSKKKLAIDASIWIYQFLKAMRDKDGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPALKKQTINNRKQRREKNSESRQETAQKLLAIQLQREAENALNRSKKPSNNTTNGDDDDVI----------------
A0A0D1DU59/1-141          MGVQGLWQLLQPVARPIKIETLEGKRLAIDSSLWLYHFQMAMRDKDGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAPAMKRKTLSGRKARKQGAKESHARTAEKLLAAQMRQAAVKHVADSQNRASSSSAAQVSTSQ----------------
E3L438/77-225             SNTIGLWTLISPVARPVNLETMGSKKLAIDSSIWLYQFQKAMRDREGKGIVNAHILGFLRRISKLLYYGIKPVFVFDGGVPTLKKQTINERKKRKRGVQENLAKTAEKLLAAQLRQAAVIEAQKRSQVKATGELITPDAVYF-DHP------IAQD-
Q5KPE3/1-155              MGVKGLWSLLNPVARPVQIESMEGKRLAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRSTIAERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQVAQEQKEAKASAEAAAEYARRYPDEAGEQIAE--
A0A077R681/1-142          MGVQGLWQLLQPVARPIKIETLEGKRLAIDSSLWLYHFQMAMRDKEGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAPVMKRKTLSARKSRKQGAKESHARTAEKLLAAQMRQAAIKHVADGQVRSSSSSAQQATTSKD---------------
Q754D7/1-138              MGVHALWDILGPTARPVKLESLSNNRMAVDASIWIYQFLKAARDKNGNRLKGAHIIGFFRRICKLLYFGIKPVFVFDGGVPPLKRETIRQRKERREGKRESAAVTARKLLALQVQQQGDTAFKGNSRSKSEGSVTFRP-------------------
E6R0K2/1-157              MGVKGLWSLLNPVARPVQIESMEGKRLAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRSTIAERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQVAHEQKEAKAAAEAAAEYARRYPDEAGEQIAEGA
B9WG42/1-137              MGVHSLWKIIGPTARPVRLEALSRKKLAIDASIWIYQFLKAMRDKDGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPVLKKQTINNRRQRREKNSESRQETAQKLLAIQLQREAENALNRSKKLSSNNVNDDS--------------------
J8PNE1/1-132              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKETRQGKRDNAKSTARKLLALQLQNASNDGTSSPVKKSGSG-------------------------
A0A0L8VPR2/1-137          MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
H0GGY8/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
A0A0D0XQ93/1-157          MGVKGLWSLLNPVARPVQIESMEGKRLAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRSTIAERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQVAHEQKEAKAAAEAAAEYARRYPDEAGEQIAEGA
A0A226A103/1-157          MGVKGLWSLLNPVARPVQIESMEGKRLAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRSTIAERKRKKAGAAANHAKVAEKLFAAQMRREAVKAAQVAQEQKEAKAAAEAAAEYARRYPDEAGEQIAEGA
C4YHA8/1-142              MGVHSLWKIVGPTARPVRLEALSKKKLAIDASIWIYQFLKAMRDKDGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPALKKQTINNRKQRREKNSESRQETAQKLLAIQLQREAENALNRLKKPSNNTTNGDDDDVIY---------------
N1P444/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
C8Z9F0/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
G2WEY4/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
A6ZUR7/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
C7GNH3/1-137              MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRESAKSTARKLLALQLQNGSNDNVKNSTPSSGSSVQIFK--------------------
#=GC scorecons            8885569464595999856967648769796979698955769966954636697599679949997598597999999695897497449847747446644469599795966546444443433354443332311110000000000000000
#=GC scorecons_70         ***__**_*__*_****_**_*__******_*******__*_*****__*_*_**_******_****_**_**********_***_**__**_**_*___*___**_****_***__________________________________________
#=GC scorecons_80         ***___*____*_****__*____**_*_*_***_***____**__*______**_**_***_****_**_********_*_***_**__**_____________*_**_*_*____________________________________________
#=GC scorecons_90         ***___*____*_****__*____*__*_*_*_*_*_*____**__*______*__**__**_***__**_*_******_*__*__*___**_____________*_**_*_*____________________________________________
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