# STOCKHOLM 1.0
#=GF ID 3.40.50.1010/FF/000042
#=GF DE Ribonuclease VapC
#=GF AC 3.40.50.1010/FF/000042
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.228
#=GS P95004/1-128      AC P95004
#=GS P95004/1-128      OS Mycobacterium tuberculosis H37Rv
#=GS P95004/1-128      DE 23S rRNA-specific endonuclease VapC20
#=GS P95004/1-128      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P95004/1-128      DR GO; GO:0004521; GO:0005515; GO:0016075; GO:0045926; 
#=GS Q5JGM2/8-140      AC Q5JGM2
#=GS Q5JGM2/8-140      OS Thermococcus kodakarensis KOD1
#=GS Q5JGM2/8-140      DE Ribonuclease VapC
#=GS Q5JGM2/8-140      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS Q7NHV6/6-134      AC Q7NHV6
#=GS Q7NHV6/6-134      OS Gloeobacter violaceus PCC 7421
#=GS Q7NHV6/6-134      DE Gll2429 protein
#=GS Q7NHV6/6-134      DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; 
#=GS B0R9L2/4-137      AC B0R9L2
#=GS B0R9L2/4-137      OS Halobacterium salinarum R1
#=GS B0R9L2/4-137      DE Ribonuclease VapC
#=GS B0R9L2/4-137      DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium; Halobacterium salinarum; 
#=GS P73415/23-155     AC P73415
#=GS P73415/23-155     OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS P73415/23-155     DE Sll1715 protein
#=GS P73415/23-155     DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS A0A1H6BRL4/4-138  AC A0A1H6BRL4
#=GS A0A1H6BRL4/4-138  OS Halobellus limi
#=GS A0A1H6BRL4/4-138  DE Ribonuclease VapC
#=GS A0A1H6BRL4/4-138  DR ORG; Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halobellus; Halobellus limi; 
#=GS C7P4V1/4-139      AC C7P4V1
#=GS C7P4V1/4-139      OS Halomicrobium mukohataei DSM 12286
#=GS C7P4V1/4-139      DE PilT protein domain protein
#=GS C7P4V1/4-139      DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloarculaceae; Halomicrobium; Halomicrobium mukohataei; 
#=GS M0DCQ1/4-138      AC M0DCQ1
#=GS M0DCQ1/4-138      OS Halorubrum tebenquichense DSM 14210
#=GS M0DCQ1/4-138      DE Ribonuclease VapC
#=GS M0DCQ1/4-138      DR ORG; Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halorubraceae; Halorubrum; Halorubrum tebenquichense; 
#=GS A0A1H0BQR3/4-138  AC A0A1H0BQR3
#=GS A0A1H0BQR3/4-138  OS Haloarchaeobius iranensis
#=GS A0A1H0BQR3/4-138  DE Ribonuclease VapC
#=GS A0A1H0BQR3/4-138  DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarchaeobius; Haloarchaeobius iranensis; 
#=GS A0A1I2VZT6/4-139  AC A0A1I2VZT6
#=GS A0A1I2VZT6/4-139  OS Halopelagius inordinatus
#=GS A0A1I2VZT6/4-139  DE Ribonuclease VapC
#=GS A0A1I2VZT6/4-139  DR ORG; Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halopelagius; Halopelagius inordinatus; 
#=GS A0A1X0K1N7/1-128  AC A0A1X0K1N7
#=GS A0A1X0K1N7/1-128  OS Mycobacterium shinjukuense
#=GS A0A1X0K1N7/1-128  DE Ribonuclease VapC
#=GS A0A1X0K1N7/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium shinjukuense; 
#=GS Q9HHY6/4-137      AC Q9HHY6
#=GS Q9HHY6/4-137      OS Halobacterium salinarum NRC-1
#=GS Q9HHY6/4-137      DE Ribonuclease VapC
#=GS Q9HHY6/4-137      DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium; Halobacterium salinarum; 
#=GS A0A0H3LD77/1-128  AC A0A0H3LD77
#=GS A0A0H3LD77/1-128  OS Mycobacterium tuberculosis str. Erdman = ATCC 35801
#=GS A0A0H3LD77/1-128  DE Ribonuclease VapC
#=GS A0A0H3LD77/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A109SYS6/1-128  AC A0A109SYS6
#=GS A0A109SYS6/1-128  OS Mycobacterium tuberculosis variant africanum
#=GS A0A109SYS6/1-128  DE Ribonuclease VapC
#=GS A0A109SYS6/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P0DMV7/1-128      AC P0DMV7
#=GS P0DMV7/1-128      OS Mycobacterium tuberculosis CDC1551
#=GS P0DMV7/1-128      DE 23S rRNA-specific endonuclease VapC20
#=GS P0DMV7/1-128      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS R4MKL3/1-128      AC R4MKL3
#=GS R4MKL3/1-128      OS Mycobacterium tuberculosis CAS/NITR204
#=GS R4MKL3/1-128      DE Ribonuclease VapC
#=GS R4MKL3/1-128      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U5P9/1-128      AC A5U5P9
#=GS A5U5P9/1-128      OS Mycobacterium tuberculosis H37Ra
#=GS A5U5P9/1-128      DE Ribonuclease VapC
#=GS A5U5P9/1-128      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A1R3Y1S7/1-128  AC A0A1R3Y1S7
#=GS A0A1R3Y1S7/1-128  OS Mycobacterium tuberculosis variant bovis AF2122/97
#=GS A0A1R3Y1S7/1-128  DE Ribonuclease VapC
#=GS A0A1R3Y1S7/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A328GCS7/1-128  AC A0A328GCS7
#=GS A0A328GCS7/1-128  OS Mycobacterium tuberculosis variant pinnipedii
#=GS A0A328GCS7/1-128  DE Ribonuclease VapC
#=GS A0A328GCS7/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3M6N3/1-128  AC A0A0H3M6N3
#=GS A0A0H3M6N3/1-128  OS Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2
#=GS A0A0H3M6N3/1-128  DE Ribonuclease VapC
#=GS A0A0H3M6N3/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A045GUL7/1-128  AC A0A045GUL7
#=GS A0A045GUL7/1-128  OS Mycobacterium tuberculosis
#=GS A0A045GUL7/1-128  DE Ribonuclease VapC
#=GS A0A045GUL7/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0K2HYP8/1-128  AC A0A0K2HYP8
#=GS A0A0K2HYP8/1-128  OS Mycobacterium tuberculosis variant bovis BCG
#=GS A0A0K2HYP8/1-128  DE Ribonuclease VapC
#=GS A0A0K2HYP8/1-128  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GF SQ 22
P95004/1-128              MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
Q5JGM2/8-140              VIYLDTSALIALFNRNDKNHERAVSYLREALESGNL--FLLSRPVLMEYLNGLSKRYGKEIAKENYDALTSSSFVYIENETEADWRKAWEFFFKYRDQRGIDLFDSLSFAIMERLGLKTAFTFDSDFEVHG--FRTV----
Q7NHV6/6-134              -LLLDTVFIQALLNRRDQYHFQS-RAA-FPMVREAL-EVWVTQAVLTEVGNALSG-IDRSAAVQFIEQCYQTVNVRVVSVDRALLMRALRLY-GSRQDKTWGLTDCISFAVMQEQGLLEALTADEHFVQAG--YRAL----
B0R9L2/4-137              -ALIDTSVLFAAAYKRDDSHDTALPAL-HGIDTGTLPEAVVLDYVLAETLNGLTTHAGHDAAVDLLDRIEENARFHIDSLTTSALATGKALF---RQHEPLSFVDACIVAYMQTEGLGHLYAFDDDFDAVEDIYRLGTA--
P73415/23-155             EVFLDTSFAIALSSITDQNHVRAIQLA-NQIEANKI-RLVTTQGILLEIGNALSKQRYRKAAIQLLESLETDPSVEVVLLTNSLYKSAFNLF-KQREDKEWGLVDCISFIVMQDRGITDVLTADIHFQQAG--FRALL---
A0A1H6BRL4/4-138          -ALIDTTALFAAAYRRDGSHDAALPVL-QGIDNGTLPEAVVLNYVLAETLNDLTTHAGHDAAVDLLDRIEENARFHIDSLTTDALATGKALF---RQHEPLSFVDACIVAYMQTEGLGYLYAFDDDFDAVEDVYRLDTAT-
C7P4V1/4-139              -ALIDTSVLFAAAYKRDNSHDGALPVL-QGIDTGTLPEAVVLDYVLAETLNGLTTHAGHDAAVDLLDRIEENARFHIDTLTIDALATGKSLF---RQHEPLSFVDACIVAYMQTEGLGYLYAFDDDFDAVEDVYRLETATN
M0DCQ1/4-138              -ALIDTSVLFAAAYKQDTSHDAALPVL-HGIDTGTLPEGVILDYVLAETLNGLTTHAGHDAAVDLLDRLEENAHFHIDSLTTTALATGKSLF---RQHEPLSFVDACIVAYMQTEGLGYLYAFDDDFDAVEDVYRLESAT-
A0A1H0BQR3/4-138          -ALIDTSVLFAAAYKRDNSHDAALPVL-HGIDNGTLPEAVVLDYVLAETLNGLTTHAGHDAAVDLLDRIEENARFHIDSLTTNALATGKALF---RQHEPLSFVDACIVAYMQTEGLGYLYAFDDDFDAVEDVYRLESAT-
A0A1I2VZT6/4-139          -ALIDTTVLFAAAYRRDGSHDAALPVL-QGIDNGALPEAVVLDYVLAETLNGLTTHAGHDAAVDLLDRIEENARFHIDSLTTDALATGKALF---RQHEPLSFVDACIIAYMQTEGLGYLYAFDDDFDAVEDVYRLETATN
A0A1X0K1N7/1-128          MIFADTSFWAALGNVGDARHGAA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRFSTVVRVEHVTADLEEQAWEWL-ARHDEREYSFVDATSFALMRKKSIRNAYAFDGDFSAAG--FVEV----
Q9HHY6/4-137              -ALIDTSVLFAAAYKRDDSHDTALPAL-HGIDTGTLPEAVVLDYVLAETLNGLTTHAGHDAAVDLLDRIEENARFHIDSLTTSALATGKALF---RQHEPLSFVDACIVAYMQTEGLGHLYAFDDDFDAVEDIYRLGTA--
A0A0H3LD77/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A0A109SYS6/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
P0DMV7/1-128              MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
R4MKL3/1-128              MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A5U5P9/1-128              MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A0A1R3Y1S7/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A0A328GCS7/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A0A0H3M6N3/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A0A045GUL7/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
A0A0K2HYP8/1-128          MIFVDTSFWAALGNAGDARHGTA-----KRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAV-AAAAIRLSTVVRVEHVTADLEEQAWEWL-VRHDEREYSFVDATSFAVMRKKGIQNAYAFDGDFSAAG--FVEV----
#=GC scorecons            156599754495454494494481112044634545545554558949646395454774897144546435536575458455344644560126555446779645584964486445777947946561075340100
#=GC scorecons_70         ____***___*_____*__*__*_____________________**_**___*____**_***_____*_______*___*______*_______*_____*****___*_*___**___****_**_*_*__*_______
#=GC scorecons_80         ____**____*_____*__*__*_____________________**_*____*_______***_________________*_____________________***____*_*___*_____*_*_**______*_______
#=GC scorecons_90         ____**____*_____*__*__*_____________________**_*____*_______**__________________________________________*____*_*___*_______*__*______________
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