# STOCKHOLM 1.0
#=GF ID 3.40.395.10/FF/000016
#=GF DE Deubiquitinase and deneddylase Dub1
#=GF AC 3.40.395.10/FF/000016
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 18.748
#=GS O84876/242-388      AC O84876
#=GS O84876/242-388      OS Chlamydia trachomatis D/UW-3/CX
#=GS O84876/242-388      DE Deubiquitinase and deneddylase Dub1
#=GS O84876/242-388      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS O84876/242-388      DR GO; GO:0000338; GO:0004843; GO:0005576; GO:0009405; GO:0016579; GO:0019784; 
#=GS B0B9A0/196-376      AC B0B9A0
#=GS B0B9A0/196-376      OS Chlamydia trachomatis 434/Bu
#=GS B0B9A0/196-376      DE Deubiquitinase and deneddylase Dub1
#=GS B0B9A0/196-376      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS B0B9A0/196-376      DR GO; GO:0000338; GO:0004843; GO:0005576; GO:0009405; GO:0016579; GO:0019784; 
#=GS C4PQR0/240-388      AC C4PQR0
#=GS C4PQR0/240-388      OS Chlamydia trachomatis B/Jali20/OT
#=GS C4PQR0/240-388      DE Deubiquitinase and deneddylase Dub1
#=GS C4PQR0/240-388      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS C4PQR0/240-388      DR GO; GO:0000338; GO:0004843; GO:0005576; GO:0009405; GO:0016579; GO:0019784; 
#=GS C4PLJ5/236-388      AC C4PLJ5
#=GS C4PLJ5/236-388      OS Chlamydia trachomatis B/TZ1A828/OT
#=GS C4PLJ5/236-388      DE Deubiquitinase and deneddylase Dub1
#=GS C4PLJ5/236-388      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS C4PLJ5/236-388      DR GO; GO:0000338; GO:0004843; GO:0005576; GO:0009405; GO:0016579; GO:0019784; 
#=GS D3UTF4/242-388      AC D3UTF4
#=GS D3UTF4/242-388      OS Chlamydia trachomatis Sweden2
#=GS D3UTF4/242-388      DE Deubiquitinase and deneddylase Dub1
#=GS D3UTF4/242-388      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS D3UTF4/242-388      DR GO; GO:0000338; GO:0004843; GO:0005576; GO:0009405; GO:0016579; GO:0019784; 
#=GS Q3KKG8/236-388      AC Q3KKG8
#=GS Q3KKG8/236-388      OS Chlamydia trachomatis A/HAR-13
#=GS Q3KKG8/236-388      DE Deubiquitinase and deneddylase Dub1
#=GS Q3KKG8/236-388      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS Q3KKG8/236-388      DR GO; GO:0000338; GO:0004843; GO:0005576; GO:0009405; GO:0016579; GO:0019784; 
#=GS A0A0E9AT26/196-376  AC A0A0E9AT26
#=GS A0A0E9AT26/196-376  OS Chlamydia trachomatis
#=GS A0A0E9AT26/196-376  DE Membrane thiol protease
#=GS A0A0E9AT26/196-376  DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS K0GC02/242-388      AC K0GC02
#=GS K0GC02/242-388      OS Chlamydia trachomatis
#=GS K0GC02/242-388      DE Membrane thiol protease
#=GS K0GC02/242-388      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GF SQ 8
O84876/242-388              ---------------------------------EENYRRHLHGTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMSPEDMEKDLQSFAQQLDQVYPAYDSQKFSVKIAAKEVIQKGSGSSCGAWCCQFLHWYLRDPFTDALNDLPVDSVER-
B0B9A0/196-376              IFNFKQKIISILEDKKAVLRGEPIKGPLPICCSKENYRRHLQRTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMPPENMKKELQSFAQQLDQVYPAYDSKKFSVKIAAKEVIQRGSGSSCGAWCCQFLHWYLKDPLTDALNDLPVDSVERH
C4PQR0/240-388              -------------------------------CSEENYRRHLQGTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMSPEDMKKDLQSFAQQLDQVYPAYDSQIFSVKIAAKEVIQKGSGSSCGAWCCQFLHWYLRDPFTDALNDLPVDSVER-
C4PLJ5/236-388              ---------------------------LPICCSEENYRRHLQGTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMSPEDMKKDLQSFAQQLDQVYPAYDSQKFSVKIAAKEVIQKGSGSSCGAWCCQFLHWYLRDPFTDALNDLPVDSVER-
D3UTF4/242-388              ---------------------------------EENYRRHLHGTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMSPEDMEKDLQSFAQQLDQVYPAYDSQKFSVKIAAKEVIQKGSGSSCGAWCCQFLHWYLRDPFTDALNDLPVDSVER-
Q3KKG8/236-388              ---------------------------LPICCSEENYRRHLQGTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMSPEDMKKDLQSFAQQLDQVYPACDSQKFSVKIAAKEVIQKGSGSSCGAWCCQFLHWYLRDPFTDALNDLPVDSVER-
A0A0E9AT26/196-376          IFNFKQKIISILEDKKAVLRGEPIKGPLPICCSKENYRRHLQRTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMPPENMKKELQSFAQQLDQVYPAYDSKKFSVKIAAKEVIQRGSGSSCGAWCCQFLHWYLKDPLTDALNDLPVDSVERH
K0GC02/242-388              ---------------------------------EENYRRHLHGTTLLPVFMWYHPTPKTLSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMSPEDMEKDLQSFAQQLDQVYPAYDSQKFSVKIAAKEVIQKGSGSSCGAWCCQFLHWYLRDPFTDALNDLPVDSVER-
#=GC scorecons              0000000000000000000000000002222445999999965999999999999999999999999999999999999999999999999999999999999959969696999999999999998996799999999999969999999999999999996996999999999999990
#=GC scorecons_70           __________________________________********_*************************************************************_**_*********************_***********************************_**************_
#=GC scorecons_80           __________________________________*******__*************************************************************_**_*_*_*****************_*************_******************_**_**************_
#=GC scorecons_90           __________________________________*******__*************************************************************_**_*_*_**************_**__************_******************_**_**************_
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