# STOCKHOLM 1.0
#=GF ID 3.40.30.10/FF/000320
#=GF DE NHL repeat-containing protein 2
#=GF AC 3.40.30.10/FF/000320
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 64.158
#=GS Q8VZ10/367-538      AC Q8VZ10
#=GS Q8VZ10/367-538      OS Arabidopsis thaliana
#=GS Q8VZ10/367-538      DE Protein SUPPRESSOR OF QUENCHING 1, chloroplastic
#=GS Q8VZ10/367-538      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8VZ10/367-538      DR GO; GO:0009507; GO:0009534; GO:0009570; GO:0010196; GO:0042651; 
#=GS A0A178WFC1/71-244   AC A0A178WFC1
#=GS A0A178WFC1/71-244   OS Arabidopsis thaliana
#=GS A0A178WFC1/71-244   DE SOQ1
#=GS A0A178WFC1/71-244   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178WG82/365-537  AC A0A178WG82
#=GS A0A178WG82/365-537  OS Arabidopsis thaliana
#=GS A0A178WG82/365-537  DE SOQ1
#=GS A0A178WG82/365-537  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q7Q8Q9/63-198       AC Q7Q8Q9
#=GS Q7Q8Q9/63-198       OS Anopheles gambiae
#=GS Q7Q8Q9/63-198       DE AGAP010610-PA
#=GS Q7Q8Q9/63-198       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS A0A2K1INI9/397-565  AC A0A2K1INI9
#=GS A0A2K1INI9/397-565  OS Physcomitrella patens
#=GS A0A2K1INI9/397-565  DE Uncharacterized protein
#=GS A0A2K1INI9/397-565  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9SEV6/348-516      AC A9SEV6
#=GS A9SEV6/348-516      OS Physcomitrella patens
#=GS A9SEV6/348-516      DE Predicted protein
#=GS A9SEV6/348-516      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A0A0P0VWM6/88-229   AC A0A0P0VWM6
#=GS A0A0P0VWM6/88-229   OS Oryza sativa Japonica Group
#=GS A0A0P0VWM6/88-229   DE Os03g0311300 protein
#=GS A0A0P0VWM6/88-229   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A1J3IGT4/82-253   AC A0A1J3IGT4
#=GS A0A1J3IGT4/82-253   OS Noccaea caerulescens
#=GS A0A1J3IGT4/82-253   DE NHL repeat-containing protein 2
#=GS A0A1J3IGT4/82-253   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A078HY95/365-536  AC A0A078HY95
#=GS A0A078HY95/365-536  OS Brassica napus
#=GS A0A078HY95/365-536  DE BnaA09g15360D protein
#=GS A0A078HY95/365-536  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS R0HX00/369-541      AC R0HX00
#=GS R0HX00/369-541      OS Capsella rubella
#=GS R0HX00/369-541      DE Uncharacterized protein
#=GS R0HX00/369-541      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7KB24/369-541      AC D7KB24
#=GS D7KB24/369-541      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KB24/369-541      DE Uncharacterized protein
#=GS D7KB24/369-541      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A0D3E5T6/366-537  AC A0A0D3E5T6
#=GS A0A0D3E5T6/366-537  OS Brassica oleracea var. oleracea
#=GS A0A0D3E5T6/366-537  DE Uncharacterized protein
#=GS A0A0D3E5T6/366-537  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS I0J3D1/369-541      AC I0J3D1
#=GS I0J3D1/369-541      OS Arabidopsis halleri subsp. halleri
#=GS I0J3D1/369-541      DE Haloacid dehalogenase-like hydrolase domain-containing protein
#=GS I0J3D1/369-541      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis halleri; Arabidopsis halleri subsp. halleri; 
#=GS M4EGL8/367-537      AC M4EGL8
#=GS M4EGL8/367-537      OS Brassica rapa subsp. pekinensis
#=GS M4EGL8/367-537      DE Uncharacterized protein
#=GS M4EGL8/367-537      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A453I8E8/1-147    AC A0A453I8E8
#=GS A0A453I8E8/1-147    OS Aegilops tauschii subsp. strangulata
#=GS A0A453I8E8/1-147    DE Uncharacterized protein
#=GS A0A453I8E8/1-147    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; 
#=GS A0A182JIX7/128-264  AC A0A182JIX7
#=GS A0A182JIX7/128-264  OS Anopheles atroparvus
#=GS A0A182JIX7/128-264  DE Uncharacterized protein
#=GS A0A182JIX7/128-264  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Angusticorn; Anopheles; maculipennis group; Anopheles atroparvus; 
#=GF SQ 16
Q8VZ10/367-538              --SFTQNQGEG---RVQQFVDYIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYY----
A0A178WFC1/71-244           SPSFTQNQGEG---RVQQFVDYIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYY----
A0A178WG82/365-537          -PSFTQNQGEG---RVQQFVDYIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYY----
Q7Q8Q9/63-198               ------------------------------------EFPDGLDWFNVTEPLTLQGSLRGKVVVLDFFTYCCINCMHILPNLKRLEHLYPIEEGLAVVGVHSAKFRNEKDSANIRAAVERYEISHPVVNDNVSAMWRKLRVQCWPTLMILGPRANPLFVIMGEGNYEDLKLYV-----------
A0A2K1INI9/397-565          ------LARPE---RVRQFKQYITDIESKGAGQVVPEFQPKLEWLN-TAPLSLKKDLKGKVVVLDFWTYCCINCMHILPDLAFLEKKYK-DQPMTVIGVHSAKFDNEKDSAAIRNAVLRYDVTHPVVNDGEMTMWRQLGVSSWPTLAVVSPKGRLIAMLSGEGHREDLDDLLEASLEFYG---
A9SEV6/348-516              ------ANGSE---RVRQFKQYITDIESKYAGQVVPEFQPKLEWLN-TAPLSLKKDLKGKVVVLDFWTYCCINCMHILPDLAFLEKKYK-DQPMTVIGVHSAKFDNEKDSAAIRNAVLRYDVTHPVVNDGEMTMWRQLGVSSWPTLAVVSPKGRLIAMLSGEGHREDLDDLLEASLEFYG---
A0A0P0VWM6/88-229           --------------------------------TCVPEFPRKLDWLN-TAPLQFGRDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYK-DKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAAL-------
A0A1J3IGT4/82-253           -----QNQGEGRLSRVQQFVDYIADLESKQTATSVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYEITHPVVNDGDMYMWRELGINSWPTFALVSPNGKLIAQIAGEGHRKDLDDLVAAALMYY----
A0A078HY95/365-536          SPSFTQNQGEG---RVQQFVDYIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYA-DKPFTVVGVHSAKFDNEKDLEAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGESHRKDLDDLVAAALI------
R0HX00/369-541              -PSFTQNQGEG---RVQQFVDYIADLESKQTATSVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLGFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDLVAAALTYY----
D7KB24/369-541              -PSFTQNQGEG---RVQQFVDYITDLESKQTATAVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLNAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDLVAAALTYY----
A0A0D3E5T6/366-537          SPSFTQNQGEG---RVQQFVDYIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYA-DKPFTVVGVHSAKFDNEKDSEAIRSAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGESHRKDLDDLVAAALI------
I0J3D1/369-541              -PSFTQNQGEG---RVQQFVDYIADLESKQTATAVPEFPSKLDWLN-TAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLAFLEKKYK-DMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDLVAAALTYY----
M4EGL8/367-537              -PSFTQNQGEG---RVQQFVEYIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYA-DKPFTVVGVHSAKFDNEKDLEAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGESHRKDLDDLVAAALI------
A0A453I8E8/1-147            ----------------------------------VPEFPRKLDWLN-TAPLQFGRDLKGRVVVLDFWTYCCINCMHVLPDLEFIEKKYK-DKPFTVVGVHSAKFDNEKDLEAIRSAVLRYNVTHPVVNDGDMYLWRELGVNSWPTFVVVAPNGKVLAQISGEGHRKDLDDVVGAALEFYDERK
A0A182JIX7/128-264          ------------------------------------EFPDGLDWFNVTEPLTMQASLRGKVVVLDFFTYCCINCMHILPNLKRLEHMYPIEEGLVVVGVHSAKFRNEKDSNNIRAAVERYEISHPVVNDNVAAMWRKLRVQCWPTLMILGPRANPLFVIMGEGSFEDLKLYIS----------
#=GC scorecons              011111222220003323312332323332222155997469897909699565569797996999699999999979979457965950736569899999996999954699599599676999999656479959675699965765956656547499765699654635351220000
#=GC scorecons_70           ____________________________________***_******_****____**************************__***_*__*_*_***************__***_**_**_*********___***_***_*****_**_*_*__*__*_****__***__*___________
#=GC scorecons_80           ____________________________________***__***_*_*_**_____******_***_*********_**_*__**__*__*____*********_****___**_**_**_*_******____***_*____***_____*_______*_***___**_______________
#=GC scorecons_90           ____________________________________**___*_*_*_*_**_____*_*_**_***_*********_**_*___*__*_______*_*******_****___**_**_**___******_____**_*____***_____*_________**____**_______________
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