# STOCKHOLM 1.0 #=GF ID 3.40.190.10/FF/000215 #=GF DE Peptide ABC transporter substrate-binding protein #=GF AC 3.40.190.10/FF/000215 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 64.197 #=GS 5isuA01/18-48_166-256_468-502 AC Q8YAJ0 #=GS 5isuA01/18-48_166-256_468-502 OS Listeria monocytogenes EGD-e #=GS 5isuA01/18-48_166-256_468-502 DE Lmo0135 protein #=GS 5isuA01/18-48_166-256_468-502 DR CATH; 5isu; A:40-70; A:188-278; A:490-524; #=GS 5isuA01/18-48_166-256_468-502 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A0F7RGK0/47-72_192-282_494-500 AC A0A0F7RGK0 #=GS A0A0F7RGK0/47-72_192-282_494-500 OS Bacillus anthracis #=GS A0A0F7RGK0/47-72_192-282_494-500 DE Oligopeptide ABC transporter, oligopeptide-binding protein #=GS A0A0F7RGK0/47-72_192-282_494-500 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus anthracis; #=GS A0A0F7RGK0/47-72_192-282_494-500 DR GO; GO:0006857; GO:0035673; #=GS A5I165/52-76_196-286_497-503 AC A5I165 #=GS A5I165/52-76_196-286_497-503 OS Clostridium botulinum A str. Hall #=GS A5I165/52-76_196-286_497-503 DE Putative oligopeptide ABC transporter,substrate-binding protein #=GS A5I165/52-76_196-286_497-503 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS Q8YAJ0/45-70_188-278_490-496 AC Q8YAJ0 #=GS Q8YAJ0/45-70_188-278_490-496 OS Listeria monocytogenes EGD-e #=GS Q8YAJ0/45-70_188-278_490-496 DE Lmo0135 protein #=GS Q8YAJ0/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A0T8G8H8/47-72_192-282_494-500 AC A0A0T8G8H8 #=GS A0A0T8G8H8/47-72_192-282_494-500 OS Streptococcus pneumoniae #=GS A0A0T8G8H8/47-72_192-282_494-500 DE Peptide ABC transporter periplasmic protein #=GS A0A0T8G8H8/47-72_192-282_494-500 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; #=GS A0A1S9IBC5/52-76_196-286_497-503 AC A0A1S9IBC5 #=GS A0A1S9IBC5/52-76_196-286_497-503 OS Clostridium tepidum #=GS A0A1S9IBC5/52-76_196-286_497-503 DE Peptide ABC transporter substrate-binding protein #=GS A0A1S9IBC5/52-76_196-286_497-503 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium tepidum; #=GS A0A473HEF5/45-70_188-278_490-496 AC A0A473HEF5 #=GS A0A473HEF5/45-70_188-278_490-496 OS Listeria innocua #=GS A0A473HEF5/45-70_188-278_490-496 DE ABC transporter substrate-binding protein #=GS A0A473HEF5/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria innocua; #=GS A0A2B9C0H5/47-72_192-282_494-500 AC A0A2B9C0H5 #=GS A0A2B9C0H5/47-72_192-282_494-500 OS Bacillus cereus #=GS A0A2B9C0H5/47-72_192-282_494-500 DE ABC transporter substrate-binding protein #=GS A0A2B9C0H5/47-72_192-282_494-500 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; #=GS A0A0M0A039/52-76_196-286_497-503 AC A0A0M0A039 #=GS A0A0M0A039/52-76_196-286_497-503 OS Clostridium botulinum #=GS A0A0M0A039/52-76_196-286_497-503 DE Peptide ABC transporter substrate-binding protein #=GS A0A0M0A039/52-76_196-286_497-503 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS B1KZU4/52-76_196-286_497-503 AC B1KZU4 #=GS B1KZU4/52-76_196-286_497-503 OS Clostridium botulinum A3 str. Loch Maree #=GS B1KZU4/52-76_196-286_497-503 DE Putative oligopeptide ABC transporter, oligopeptide-binding protein #=GS B1KZU4/52-76_196-286_497-503 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS S5LGR8/45-70_188-278_490-496 AC S5LGR8 #=GS S5LGR8/45-70_188-278_490-496 OS Listeria monocytogenes #=GS S5LGR8/45-70_188-278_490-496 DE ABC transporter substrate-binding protein #=GS S5LGR8/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A3T1U062/45-70_188-278_490-496 AC A0A3T1U062 #=GS A0A3T1U062/45-70_188-278_490-496 OS Listeria monocytogenes serotype 1/2a #=GS A0A3T1U062/45-70_188-278_490-496 DE ABC transporter substrate-binding protein #=GS A0A3T1U062/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A241SKM6/45-70_188-278_490-496 AC A0A241SKM6 #=GS A0A241SKM6/45-70_188-278_490-496 OS Listeria monocytogenes serotype 1/2b str. 10-0811 #=GS A0A241SKM6/45-70_188-278_490-496 DE Putative peptide/nickel transport system substrate-binding protein #=GS A0A241SKM6/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A0E1R396/45-70_188-278_490-496 AC A0A0E1R396 #=GS A0A0E1R396/45-70_188-278_490-496 OS Listeria monocytogenes serotype 4b str. LL195 #=GS A0A0E1R396/45-70_188-278_490-496 DE Oligopeptide-binding protein AppA #=GS A0A0E1R396/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A478C035/45-70_188-278_490-496 AC A0A478C035 #=GS A0A478C035/45-70_188-278_490-496 OS Listeria monocytogenes serotype 1/2b #=GS A0A478C035/45-70_188-278_490-496 DE ABC transporter substrate-binding protein #=GS A0A478C035/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A0E0UT81/45-70_188-278_490-496 AC A0A0E0UT81 #=GS A0A0E0UT81/45-70_188-278_490-496 OS Listeria monocytogenes M7 #=GS A0A0E0UT81/45-70_188-278_490-496 DE Putative oligopeptide ABC transporter, substrate binding protein #=GS A0A0E0UT81/45-70_188-278_490-496 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS A0A3P1U5R9/47-72_192-282_494-500 AC A0A3P1U5R9 #=GS A0A3P1U5R9/47-72_192-282_494-500 OS Bacillus anthracis #=GS A0A3P1U5R9/47-72_192-282_494-500 DE Oligopeptide ABC transporter, oligopeptide-binding protein #=GS A0A3P1U5R9/47-72_192-282_494-500 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus anthracis; #=GS R8GX11/47-72_192-282_494-500 AC R8GX11 #=GS R8GX11/47-72_192-282_494-500 OS Bacillus cereus VD196 #=GS R8GX11/47-72_192-282_494-500 DE Oligopeptide-binding protein oppA #=GS R8GX11/47-72_192-282_494-500 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; #=GS Q81HA9/2-9_129-219_431-437 AC Q81HA9 #=GS Q81HA9/2-9_129-219_431-437 OS Bacillus cereus ATCC 14579 #=GS Q81HA9/2-9_129-219_431-437 DE Oligopeptide-binding protein oppA #=GS Q81HA9/2-9_129-219_431-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; #=GF SQ 19 5isuA01/18-48_166-256_468-502 GSLIIGVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLALDSRYGGQKAATPQPVTMFRDLSKLYLTE A0A0F7RGK0/47-72_192-282_494-500 -----GVSDNPETMNPLYANDRVSLTVQQALAKSKKNLQPVGSGPFKFKEYKSDEYVALDRFDDYVGGKAKLDSIVYRVVKDRNTANVSLQNGQINMKMIEPQDFKKLDSTGNFSMVTFPEGPKAVIAV---------------------------- A5I165/52-76_196-286_497-503 ------IRGEPEILNPIYAYDRDTMTMDNALKKSIKNEKPIGSGAFRFKESKKGESITLERFDNYVGGKPHLDTITYRIIADPNSSKVALENGEVSANYIDISGISKFEKNEKLKVVAYDEGSNATIAV---------------------------- Q8YAJ0/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A0T8G8H8/47-72_192-282_494-500 -----GVSDNPDTMNPLYANDRVSLTVQQALAKSKKNLQPVGSGPFKFKEYKSDEYVALDRFDDYVGGKAKLDSIVYRVVKDRNTANVSLQNGQINMKMIEPQDFKKLDSTGNFSMVTFPEGPKAVIAV---------------------------- A0A1S9IBC5/52-76_196-286_497-503 ------IRGEPEILNPIYAYDRDTMTMNNALKKSAKNEKPIGSGPFKFKESKKGESITLEKFDNYVGGKPHLDTITYRIIADPNSSRVALENAEISANYIDISGISKFEKNEKLKVVAYDEGSNATIAV---------------------------- A0A473HEF5/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A2B9C0H5/47-72_192-282_494-500 -----GVSDNPDTMNPLYANDRVSLTVQQALAKSKKNLQPVGSGPFKFKEYKSDEYVALDRFDDYVGGKAKLDSIVYRVVKDRNTANVSLQNGQINMKMIEPQDFKKLDSTGNFSMVTFPEGPKAVIAV---------------------------- A0A0M0A039/52-76_196-286_497-503 ------IRGEPEILNPIYAYDRDTMTMDNALKKSIKNEKPIGSGAFRFKESKKGESITLERFDNYVGGKPHLDTITYRIIADPNSSKVALENGEVSANYIDISGISKFEKNEKLKVVAYDEGSNATIAV---------------------------- B1KZU4/52-76_196-286_497-503 ------IRGEPEILNPIYAYDRDTMTMDNALKKSVKNEKPIGSGAFKFKESKKGESITLERFDNYVGGKPHLDTITYRIVADQNSSGVALENGEISANYIDISGISKFEKNEKLKVVAYDEGSNATIAV---------------------------- S5LGR8/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A3T1U062/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A241SKM6/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A0E1R396/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A478C035/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A0E0UT81/45-70_188-278_490-496 -----GVTGDPEVINPNYASDRVTLTIQQAVEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYPENDNAVLAL---------------------------- A0A3P1U5R9/47-72_192-282_494-500 -----GVSDNPETMNPLYANDRVSLTVQQALAKSKKNLQPVGSGPFKFKEYKSDEYVALDRFDDYVGGKAKLDSIVYRVVKDRNTANVSLQNGQINMKMIEPQDFKKLDSTGNFSMVTFPEGPKAVIAV---------------------------- R8GX11/47-72_192-282_494-500 -----GVSDNPDTMNPLYANDRVSLTVQQALAKSKKNLQPVGSGPFKFKEYKSDEYVALDRFDDYVGGKAKLDSIVYRVVKDRNTANVSLQNGQINMKMIEPQDFKKLDSTGNFSMVTFPEGPKAVIAV---------------------------- Q81HA9/2-9_129-219_431-437 -----------------------SLTVQQALAKSKKNLQPVGSGPFKFKEYKSDEYVALDRFDDYVGGKAKLDSIVYRVVKDRNTANVSLQNGQINMKMIEPQDFKKLDSTGNFSMVTFPEGPKAVIAV---------------------------- #=GC scorecons 0000036455764577377477467966696499399459799977895969469675978967956996699476797569595666697986865649565635957554455677769546966960000000000000000000000000000 #=GC scorecons_70 ______*___**__**_**_**_***_****_**_**__*********_*_*_**_*_*******__******_*_***__*_*_***********_*_*___*__*_*_______***_*__******____________________________ #=GC scorecons_80 __________*___**_**_**__**___*__**_**__*****_***_*_*__*_*_****__*__**__**___***__*_*_____*_**_*____*______*_*_________*_*___*__*_____________________________ #=GC scorecons_90 _________________________*___*__**_**__*_***__**_*_*__*___*_**__*__**__**____*___*_*_____*_**_*____*______*_____________*___*__*_____________________________ //