# STOCKHOLM 1.0
#=GF ID 3.40.140.10/FF/000060
#=GF DE Cytidine deaminase
#=GF AC 3.40.140.10/FF/000060
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 83.965
#=GS Q2FY04/3-129      AC Q2FY04
#=GS Q2FY04/3-129      OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS Q2FY04/3-129      DE Cytidine deaminase
#=GS Q2FY04/3-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q9RSE7/14-148     AC Q9RSE7
#=GS Q9RSE7/14-148     OS Deinococcus radiodurans R1
#=GS Q9RSE7/14-148     DE Cytidine deaminase
#=GS Q9RSE7/14-148     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans; 
#=GS A0A0H3JMT6/3-129  AC A0A0H3JMT6
#=GS A0A0H3JMT6/3-129  OS Staphylococcus aureus subsp. aureus N315
#=GS A0A0H3JMT6/3-129  DE Cytidine deaminase
#=GS A0A0H3JMT6/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A2D7V2/2-138      AC A2D7V2
#=GS A2D7V2/2-138      OS Trichomonas vaginalis
#=GS A2D7V2/2-138      DE Cytidine deaminase
#=GS A2D7V2/2-138      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0A3P6L2P5/4-131  AC A0A3P6L2P5
#=GS A0A3P6L2P5/4-131  OS Sphingomonas paucimobilis
#=GS A0A3P6L2P5/4-131  DE Cytidine deaminase
#=GS A0A3P6L2P5/4-131  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas paucimobilis; 
#=GS A0A0B7LTD7/4-131  AC A0A0B7LTD7
#=GS A0A0B7LTD7/4-131  OS Streptococcus pneumoniae
#=GS A0A0B7LTD7/4-131  DE Cytidine deaminase
#=GS A0A0B7LTD7/4-131  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A1E8X2U9/3-129  AC A0A1E8X2U9
#=GS A0A1E8X2U9/3-129  OS Staphylococcus sp. HMSC055H04
#=GS A0A1E8X2U9/3-129  DE Cytidine deaminase
#=GS A0A1E8X2U9/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus sp. HMSC055H04; 
#=GS W8TT41/3-129      AC W8TT41
#=GS W8TT41/3-129      OS Staphylococcus aureus
#=GS W8TT41/3-129      DE Cytidine deaminase
#=GS W8TT41/3-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A2FCA3/3-138      AC A2FCA3
#=GS A2FCA3/3-138      OS Trichomonas vaginalis
#=GS A2FCA3/3-138      DE Cytidine deaminase
#=GS A2FCA3/3-138      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS Q8DPF7/4-131      AC Q8DPF7
#=GS Q8DPF7/4-131      OS Streptococcus pneumoniae R6
#=GS Q8DPF7/4-131      DE Cytidine deaminase
#=GS Q8DPF7/4-131      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS C1C7T7/4-131      AC C1C7T7
#=GS C1C7T7/4-131      OS Streptococcus pneumoniae 70585
#=GS C1C7T7/4-131      DE Cytidine deaminase
#=GS C1C7T7/4-131      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A5M7S1/4-131      AC A5M7S1
#=GS A5M7S1/4-131      OS Streptococcus pneumoniae SP14-BS69
#=GS A5M7S1/4-131      DE Cytidine deaminase
#=GS A5M7S1/4-131      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0H2ZNN0/4-131  AC A0A0H2ZNN0
#=GS A0A0H2ZNN0/4-131  OS Streptococcus pneumoniae D39
#=GS A0A0H2ZNN0/4-131  DE Cytidine deaminase
#=GS A0A0H2ZNN0/4-131  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0H2XFN0/3-129  AC A0A0H2XFN0
#=GS A0A0H2XFN0/3-129  OS Staphylococcus aureus subsp. aureus USA300
#=GS A0A0H2XFN0/3-129  DE Cytidine deaminase
#=GS A0A0H2XFN0/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1AIK0/3-129  AC A0A0E1AIK0
#=GS A0A0E1AIK0/3-129  OS Staphylococcus aureus subsp. aureus Z172
#=GS A0A0E1AIK0/3-129  DE Cytidine deaminase
#=GS A0A0E1AIK0/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3JXQ8/3-129  AC A0A0H3JXQ8
#=GS A0A0H3JXQ8/3-129  OS Staphylococcus aureus subsp. aureus MW2
#=GS A0A0H3JXQ8/3-129  DE Cytidine deaminase
#=GS A0A0H3JXQ8/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3JRT6/3-129  AC A0A0H3JRT6
#=GS A0A0H3JRT6/3-129  OS Staphylococcus aureus subsp. aureus Mu50
#=GS A0A0H3JRT6/3-129  DE Cytidine deaminase
#=GS A0A0H3JRT6/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3K8E4/3-129  AC A0A0H3K8E4
#=GS A0A0H3K8E4/3-129  OS Staphylococcus aureus subsp. aureus str. Newman
#=GS A0A0H3K8E4/3-129  DE Cytidine deaminase
#=GS A0A0H3K8E4/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H2WZG9/3-129  AC A0A0H2WZG9
#=GS A0A0H2WZG9/3-129  OS Staphylococcus aureus subsp. aureus COL
#=GS A0A0H2WZG9/3-129  DE Cytidine deaminase
#=GS A0A0H2WZG9/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS T1Y9S7/3-129      AC T1Y9S7
#=GS T1Y9S7/3-129      OS Staphylococcus aureus subsp. aureus CN1
#=GS T1Y9S7/3-129      DE Cytidine deaminase
#=GS T1Y9S7/3-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1VJ45/3-129  AC A0A0E1VJ45
#=GS A0A0E1VJ45/3-129  OS Staphylococcus aureus subsp. aureus USA300_TCH959
#=GS A0A0E1VJ45/3-129  DE Cytidine deaminase
#=GS A0A0E1VJ45/3-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GF SQ 21
Q2FY04/3-129              ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
Q9RSE7/14-148             DGNALH--LTPDPQLLAGAQAAFKQAYAPYSKFRVGAALRTPDGQVFFGANVENSSFGLTRCAEQSAVQALATAGGR--TFTDLVVYTE-ASPPATPCGACRQILFEFA-PDARVVCTNAQG-EVISGLVRDFLPHGFRLAQ---
A0A0H3JMT6/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A2D7V2/2-138              ---AYHTSDEDIKRLFEVASAKKVNSYSPYSHFRVSAALLCRDGSIINGVNVENCSYPNGCCAERSAIYSAISQGYK--DFVAILITSDMKDDFIYPCGMCRQVIAEWG--NLEVISTKADGKEIKRYHISDLLPEASTPADLT-
A0A3P6L2P5/4-131          ---------INKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGE-TEDYLPPCNICRQVMVEFCEPDTLVFLLNGKG-NILELRLEELVPYSFS------
A0A0B7LTD7/4-131          ---------INKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGE-TEDYLPPCNICRQVMVEFCEPDTLVFLLNGKG-NILELRLEELVPYSFS------
A0A1E8X2U9/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
W8TT41/3-129              ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A2FCA3/3-138              ----YHTSDEDVKRMFEMATVNQKNCYVPYSHYPVSAALLCKDGTIVLGVNVENCSYPNGCCAERSAIFGAVSNGHR--DFVSILITSKMGDDFILPCGMCRQVIAEWG--NLEVISTKGNG-EIKRYHISDLLPEAFTPADLTK
Q8DPF7/4-131              ---------INKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGE-TEDYLPPCNICRQVMVEFCEPDTLVFLLNGKG-NILELRLEELVPYSFS------
C1C7T7/4-131              ---------INKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGE-TEDYLPPCNICRQVMVEFCEPDTLVFLLNGKG-NILELRLEELVPYSFS------
A5M7S1/4-131              ---------INKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGE-TEDYLPPCNICRQVMVEFCEPDTLVFLLNGKG-NILELRLEELVPYSFS------
A0A0H2ZNN0/4-131          ---------INKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGE-TEDYLPPCNICRQVMVEFCEPDTLVFLLNGKG-NILELRLEELVPYSFS------
A0A0H2XFN0/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A0A0E1AIK0/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A0A0H3JXQ8/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A0A0H3JRT6/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A0A0H3K8E4/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A0A0H2WZG9/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
T1Y9S7/3-129              ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
A0A0E1VJ45/3-129          ----------YQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKG-DMVMMTVAELLPFGFS------
#=GC scorecons            0000000001444455546565455595999584979564479955549597994975553999866644558797825763584754605654449965999863956337449545746905643446478694576000000
#=GC scorecons_70         __________________________*_***_*_***_*__***____*_****_**____****_______*****__*___*_*__*__*____**__****__*____*__*___*_**__*______****__**______
#=GC scorecons_80         __________________________*_***_*_***____***____*_****_**____****_______*_*_*__*___*_*__________**__****__*____*__*___*__*_________**_*__*_______
#=GC scorecons_90         __________________________*_***_*_*_*_____**____*_*_**_*_____****_______*_*_*______*____________**__****__*_______*______*__________*_*__________
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