# STOCKHOLM 1.0
#=GF ID 3.40.1340.10/FF/000007
#=GF DE RNA polymerase II subunit Rpb5a
#=GF AC 3.40.1340.10/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 12.105
#=GS E2RU58/6-151      AC E2RU58
#=GS E2RU58/6-151      OS Giardia lamblia ATCC 50803
#=GS E2RU58/6-151      DE RNA polymerase II subunit Rpb5a
#=GS E2RU58/6-151      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS E1F2Z7/5-151      AC E1F2Z7
#=GS E1F2Z7/5-151      OS Giardia lamblia P15
#=GS E1F2Z7/5-151      DE RNA polymerase II subunit Rpb5a
#=GS E1F2Z7/5-151      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS Q8MUV0/6-151      AC Q8MUV0
#=GS Q8MUV0/6-151      OS Giardia intestinalis
#=GS Q8MUV0/6-151      DE RNA polymerase II subunit Rpb5a
#=GS Q8MUV0/6-151      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS C6LZS6/6-156      AC C6LZS6
#=GS C6LZS6/6-156      OS Giardia intestinalis ATCC 50581
#=GS C6LZS6/6-156      DE RNA polymerase II subunit Rpb5a
#=GS C6LZS6/6-156      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6U2X7/6-156      AC V6U2X7
#=GS V6U2X7/6-156      OS Giardia intestinalis
#=GS V6U2X7/6-156      DE RNA polymerase Rpb5, C-terminal domain
#=GS V6U2X7/6-156      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0A132NZZ0/6-156  AC A0A132NZZ0
#=GS A0A132NZZ0/6-156  OS Giardia intestinalis assemblage B
#=GS A0A132NZZ0/6-156  DE RNA polymerase II subunit Rpb5a C-terminal domain
#=GS A0A132NZZ0/6-156  DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6TMT2/9-154      AC V6TMT2
#=GS V6TMT2/9-154      OS Giardia intestinalis
#=GS V6TMT2/9-154      DE RNA polymerase Rpb5, C-terminal domain
#=GS V6TMT2/9-154      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GF SQ 7
E2RU58/6-151              -GTAESFKVRRTVIEMLIDRGYMVQSDDMSPWSAEMLLNQTFQDFDGEFHTAPFSWKILGTHKLRKSSANSLNQETIKVRPVPVIDKDLIDKLKVETQNRETRPLDRVIYVIYGREGKKLDSPNKTIQARIDEAQRANGIVIEHFLV-----
E1F2Z7/5-151              YGTAESFKVRRTVVEMLIDRGYMVQSDDMSPWSAEMLLNQTFQDFDGEFHTAPFSWKILGTHKLRKSSANSLNQETIKVRPVPVIDKDLIDKLKVETQNRETRPLDRIIYVIYGREGKKLDPPNKTIQARIDEAQRANGIVIEHFLV-----
Q8MUV0/6-151              -GTAESFKVRRTVIEMLIDRGYMVQSDDMSPWSAEMLLNQTFQDFDGEFHTAPFSWKILGTHKLRKSSANSLNQETIKVRPVPVIDKDLIDKLKVETQNRETRPLDRVIYVIYGREGKKLDSPNKTIQARIDEAQRANGIVIEHFLV-----
C6LZS6/6-156              -GTAESFKVRRTVVEMLIDRGYMVQSDDISPWSAEMLLGQTFQDFEAEFHTAPFSWKILGTHKLRKSNANSLNQETIKVRPVPVIDKELIDKLRVETQNKETRPLDRIIYVIYGREGKKLDSPNKTIQARIDEAQRVNGIIIEHFLVTRLLI
V6U2X7/6-156              -GTAESFKVRRTVVEMLIDRGYMVQSDDISPWSAEMLLGQTFQDFEAEFHTAPFSWKILGTHKLRKSNANSLNQETIKVRPVPVIDKELIDKLRVETQNKETRPLDRIIYVIYGREGKKLDSPNKTIQARIDEAQRVNGIIIEHFLVTRLLI
A0A132NZZ0/6-156          -GTAESFKVRRTVVEMLIDRGYMVQSDDISPWSAEMLLGQTFQDFEAEFHTAPFSWKILGTHKLRKSNANSLNQETIKVRPVPVIDKELIDKLRVETQNKETRPLDRIIYVIYGREGKKLDSPNKTIQARIDEAQRVNGIIIEHFLVTRLLI
V6TMT2/9-154              -GTAESFKVRRTVIEMLIDRGYMVQSDDMSPWSAEMLLNQTFQDFDGEFHTAPFSWKILGTHKLRKSSANSLNQETIKVRPVPVIDKDLIDKLKVETQNRETRPLDRVIYVIYGREGKKLDSPNKTIQARIDEAQRANGIVIEHFLV-----
#=GC scorecons            09999999999997999999999999996999999999599999965999999999999999999995999999999999999999969999969999969999999799999999999997999999999999995999699999911111
#=GC scorecons_70         _*************************************_*******_********************_********************************************************************_**********_____
#=GC scorecons_80         _************_**************_*********_******__********************_*******************_*****_*****_*******_****************************_***_******_____
#=GC scorecons_90         _************_**************_*********_******__********************_*******************_*****_*****_*******_*************_**************_***_******_____
//