# STOCKHOLM 1.0
#=GF ID 3.40.1310.20/FF/000003
#=GF DE Rep protein
#=GF AC 3.40.1310.20/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 15.153
#=GS 5xorE00/1-112 AC A9YPG7
#=GS 5xorE00/1-112 OS Porcine circovirus 2
#=GS 5xorE00/1-112 DE Rep protein
#=GS 5xorE00/1-112 DR CATH; 5xor; E:13-112; 
#=GS 5xorE00/1-112 DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GS Q8BB16/1-112  AC Q8BB16
#=GS Q8BB16/1-112  OS Porcine circovirus 2
#=GS Q8BB16/1-112  DE Replication-associated protein
#=GS Q8BB16/1-112  DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GS Q8BB16/1-112  DR GO; GO:0039684; 
#=GS Q8BB16/1-112  DR EC; 3.6.1.3; 
#=GS 5xorD00/1-112 AC A9YPG7
#=GS 5xorD00/1-112 OS Porcine circovirus 2
#=GS 5xorD00/1-112 DE Rep protein
#=GS 5xorD00/1-112 DR CATH; 5xor; D:12-112; 
#=GS 5xorD00/1-112 DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GS 5xorC00/1-112 AC A9YPG7
#=GS 5xorC00/1-112 OS Porcine circovirus 2
#=GS 5xorC00/1-112 DE Rep protein
#=GS 5xorC00/1-112 DR CATH; 5xor; C:11-112; 
#=GS 5xorC00/1-112 DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GS 5xorB00/1-112 AC A9YPG7
#=GS 5xorB00/1-112 OS Porcine circovirus 2
#=GS 5xorB00/1-112 DE Rep protein
#=GS 5xorB00/1-112 DR CATH; 5xor; B:12-112; 
#=GS 5xorB00/1-112 DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GS 5xorA00/1-112 AC A9YPG7
#=GS 5xorA00/1-112 OS Porcine circovirus 2
#=GS 5xorA00/1-112 DE Rep protein
#=GS 5xorA00/1-112 DR CATH; 5xor; A:12-112; 
#=GS 5xorA00/1-112 DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GS Q805H4/2-109  AC Q805H4
#=GS Q805H4/2-109  OS Porcine circovirus 1 (isolate China)
#=GS Q805H4/2-109  DE Replication-associated protein
#=GS Q805H4/2-109  DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 1; 
#=GS Q805H4/2-109  DR GO; GO:0039684; 
#=GS Q805H4/2-109  DR EC; 3.6.1.3; 
#=GS C4NCB0/2-109  AC C4NCB0
#=GS C4NCB0/2-109  OS Porcine circovirus 1
#=GS C4NCB0/2-109  DE Rep
#=GS C4NCB0/2-109  DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 1; 
#=GS C4NCB0/2-109  DR EC; 3.6.1.3; 
#=GS Q3L227/2-109  AC Q3L227
#=GS Q3L227/2-109  OS Porcine circovirus 1
#=GS Q3L227/2-109  DE Replication associated protein
#=GS Q3L227/2-109  DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 1; 
#=GS Q3L227/2-109  DR EC; 3.6.1.3; 
#=GS A9YPG7/1-112  AC A9YPG7
#=GS A9YPG7/1-112  OS Porcine circovirus 2
#=GS A9YPG7/1-112  DE Rep protein
#=GS A9YPG7/1-112  DR ORG; Viruses; Circoviridae; Circovirus; Porcine circovirus 2; 
#=GF SQ 10
5xorE00/1-112         MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
Q8BB16/1-112          MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIREPPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
5xorD00/1-112         MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
5xorC00/1-112         MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
5xorB00/1-112         MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
5xorA00/1-112         MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
Q805H4/2-109          -PSKK---SGPQPHKRWVFTLNNPSEEEKNKIRELPISLFDYFVCGEEGLEEGRTPHLQGFANFAKKQTFNKVKWYFGARCHIEKAKGTDQQNKEYCSKEGHILIECGAPRN
C4NCB0/2-109          -PSKK---SGPQPHKRWVFTLNNPSEEEKNKIRELPISLFDYFVCGEEGLEEGRTPHLQGFANFAKKQTFNKVKWYFGARCHIEKAKGTDQQNKEYCSKEGHILIECGAPRN
Q3L227/2-109          -PSKK---SGPQPHKRWVFTLNNPSEEEKNKIRELPISLFDYFVCGEEGLEEGRTPHLQGFANFAKKQTFNKVKWYFGARCHIEKAKGTDQQNKEYCSKEGHILIECGAPRN
A9YPG7/1-112          MPSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEYCSKEGNLLIECGAPRS
#=GC scorecons        2999922299999999999999999969659997799999999649999499999999999999599999999999699999999999999999999999956999999995
#=GC scorecons_70     _****___*********************_**************_****_**************_***********_************************__********_
#=GC scorecons_80     _****___******************_*__***_*********__****_**************_***********_************************__********_
#=GC scorecons_90     _****___******************_*__***__********__****_**************_***********_************************__********_
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