# STOCKHOLM 1.0
#=GF ID 3.30.930.10/FF/000238
#=GF DE Lysine--tRNA ligase
#=GF AC 3.30.930.10/FF/000238
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 31.167
#=GS 4upaA02/154-311_377-591  AC C4M7X2
#=GS 4upaA02/154-311_377-591  OS Entamoeba histolytica
#=GS 4upaA02/154-311_377-591  DE Lysine--tRNA ligase
#=GS 4upaA02/154-311_377-591  DR CATH; 4upa; A:146-303; A:369-583; 
#=GS 4upaA02/154-311_377-591  DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS 4up9A02/154-311_378-591  AC C4M7X2
#=GS 4up9A02/154-311_378-591  OS Entamoeba histolytica
#=GS 4up9A02/154-311_378-591  DE Lysine--tRNA ligase
#=GS 4up9A02/154-311_378-591  DR CATH; 4up9; A:146-302; A:369-583; 
#=GS 4up9A02/154-311_378-591  DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS 4up7A02/154-311_373-591  AC C4M7X2
#=GS 4up7A02/154-311_373-591  OS Entamoeba histolytica
#=GS 4up7A02/154-311_373-591  DE Lysine--tRNA ligase
#=GS 4up7A02/154-311_373-591  DR CATH; 4up7; A:146-366; A:367-583; 
#=GS 4up7A02/154-311_373-591  DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS H3F5L4/1-197             AC H3F5L4
#=GS H3F5L4/1-197             OS Pristionchus pacificus
#=GS H3F5L4/1-197             DE Uncharacterized protein
#=GS H3F5L4/1-197             DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS C4M7X2/370-562           AC C4M7X2
#=GS C4M7X2/370-562           OS Entamoeba histolytica
#=GS C4M7X2/370-562           DE Lysine--tRNA ligase
#=GS C4M7X2/370-562           DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M2Q560/370-562           AC M2Q560
#=GS M2Q560/370-562           OS Entamoeba histolytica KU27
#=GS M2Q560/370-562           DE Lysyl-tRNA synthetase cytoplasmic, putative
#=GS M2Q560/370-562           DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GF SQ 6
4upaA02/154-311_377-591          YGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITHHNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNMVKDITGGSTKLEIK----KKMVLDFTAPFKRISYVHALEEKFGEKIPRP--LDGPEALTFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDELEKKAREAKEDAMVAQEKA
4up9A02/154-311_378-591          YGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITHHNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNMVKDITGGSTKLEI-----KKMVLDFTAPFKRISYVHALEEKFGEKIPRP--LDGPEALTFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDELEKKAREAKEDAMVAQEKA
4up7A02/154-311_373-591          YGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITHHNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNMVKDITGGSTKLEIKFVTEKKMVLDFTAPFKRISYVHALEEKFGEKIPRP--LDGPEALTFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDELEKKAREAKEDAMVAQELA
H3F5L4/1-197                     ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYDGLEDVLKCKLPPPNTLHTPEAREALDALCKKHNVDCTEPRTAARLLDKLVGEFLESTFISPTFLIGHPQIMSPLAKWHRSIEGLTERFELFAVTREIANAYTELNDPIIQRERFEQQAKDKDAGDDEAQCVDETFCNALEYGLPPTAGWGMGIDRLSMILTDSNNIKEVLLFPAMRPEDNNKEAEKETPKDSTA-----
C4M7X2/370-562                   -------------------------------------------------------------------------------------------------------------------------------------------------------------------KMVLDFTAPFKRISYVHALEEKFGEKIPRP--LDGPEALTFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPE---------------------
M2Q560/370-562                   -------------------------------------------------------------------------------------------------------------------------------------------------------------------KMVLDFTAPFKRISYVHALEEKFGEKIPRP--LDGPEALAFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPE---------------------
#=GC scorecons                   1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111000001555555555555555566997566596969009669995459665657696596996969967999697669666769996567996999999699955699999999666999999999996997996699999999699999995999695696976699969997999996969696699999699969999321221123212322211101
#=GC scorecons_70                ___________________________________________________________________________________________________________________________________________________________________________________*****_*__***_*__******___**____****_********************__**_****_***************__***********_*****************_*********_*******_*****_**************************_***************_____________________
#=GC scorecons_80                _____________________________________________________________________________________________________________________________________________________________________________________***____*_*_*__*__***___*_____*_*__*_**_*_**__***_**__*___*_***____**_******_***___********___***********_*****__********_*******_***_*__*_**__***_***_*****_*_*_*__*****_***_****_____________________
#=GC scorecons_90                _____________________________________________________________________________________________________________________________________________________________________________________**_____*_*_*__*__***___*_______*__*_**_*_**__***_*___*_____***____**_******_***___********___***********_**_**__********_*******_***_*__*_*___***_***_*****_*_*_*__*****_***_****_____________________
//