# STOCKHOLM 1.0
#=GF ID 3.30.830.10/FF/000117
#=GF DE Mitochondrial Processing Peptidase Alpha
#=GF AC 3.30.830.10/FF/000117
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 44.523
#=GS Q95XN2/285-509      AC Q95XN2
#=GS Q95XN2/285-509      OS Caenorhabditis elegans
#=GS Q95XN2/285-509      DE Mitochondrial Processing Peptidase Alpha
#=GS Q95XN2/285-509      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q95XN2/285-509      DR GO; GO:0005515; GO:0006508; GO:0017087; 
#=GS H3DSL3/309-536      AC H3DSL3
#=GS H3DSL3/309-536      OS Pristionchus pacificus
#=GS H3DSL3/309-536      DE Uncharacterized protein
#=GS H3DSL3/309-536      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A8Y1Q3/311-544      AC A8Y1Q3
#=GS A8Y1Q3/311-544      OS Caenorhabditis briggsae
#=GS A8Y1Q3/311-544      DE Protein CBR-MPPA-1
#=GS A8Y1Q3/311-544      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2A6BFJ2/277-504  AC A0A2A6BFJ2
#=GS A0A2A6BFJ2/277-504  OS Pristionchus pacificus
#=GS A0A2A6BFJ2/277-504  DE Mppa-1
#=GS A0A2A6BFJ2/277-504  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 4
Q95XN2/285-509              -----RAQYTGGELRLDTDLTKLTIGKPYPLLSHVVLGLEGCSYKDEDFVAFCVLQSLLGGGGAFSAGGPGKGMYARMYTELMNRHHWIYSAIAHNHSYSDSGVFTVTASSPPENINDALILLVHQILQLQQGVEPTELARARTQLRSHLMMNLE------VRPVLFEDMVRQVLGHGDRKQPEEYAEKI------EKVTNSDIIRVTERLLASKPSLVGYGDIKKLKDLRSLDQAVAKRDL
H3DSL3/309-536              PVDGSRAQYTGGEVREQADLSKVGAGTPYPLLAHLSLGFEGVGYKDEDFVTFCVVQSLLGGGNSFSAGGPGKGMYTRCYVDVLNHHHWMYGCQAFNHSYADAGVFAVNASAPPEGIGYALQVVLDLLLRLTEGAAKEELDRAKTQLKSQLLMNLE------VRPVMFEDMARQVMGHGYRRKPWEYMAAI------DGVTEKDIVRVGNRLLSSRPTLVGYGDIEVLASYEQLDEAVARR--
A8Y1Q3/311-544              ------SQYTGGEVRMQKDLKPLTIGKPYPLLAHVVLGLEGCGYKDEDFVAFCVLQSLLGGGGAFSAGGPGKGMYARMYTELMNRHHWIYSAIAHNHSYSDGGVFTVTASAPPDNIHDALILLVHQILQLQQGIDPTELARARTQLRSHLMMNLEGTERGNSQRSMRRELVSILCASTEFKSLFALKRCLKRVFFAEKVTNEDILRVTERLLSSKPSLVGYGDIETLGNYRSLDQALAKR--
A0A2A6BFJ2/277-504          PVDGSRAQYTGGEVREQADLSKVGAGTPYPLLAHLSLGFEGVGYKDEDFVTFCVVQSLLGGGNSFSAGGPGKGMYTRCYVDVLNHHHWMYGCQAFNHSYADAGVFAVNASAPPEGIGYALQVVLDLLLRLTEGAAKEELDRAKTQLKSQLLMNLE------VRPVMFEDMARQVMGHGYRRKPWEYMAAI------DGVTEKDIVRVGNRLLSSRPTLVGYGDIEVLASYEQLDEAVARR--
#=GC scorecons              11111359999996925399345559499999695499599469999999599959999999559999999999959495656959996954395999959499959599699659349935555459594594344994996999696969999000000565564566554635553463515523260000006499539959955999696959999999639345549959696900
#=GC scorecons_70           _______********___**_____*_*****_*__**_**__*******_***_*******__***********_*_*_*__*_***_*___*_****_*_***_*_**_***_*__**_______*_*__*____**_********_*_****__________*__**__________*_______________*_**__**_**__***_***_*******__*_____**_*_***__
#=GC scorecons_80           _______******_*___**_____*_*****_*__**_**__*******_***_*******__***********_*_*____*_***_*___*_****_*_***_*_**_**__*__**_______*_*__*____**_**_***_*_*_****___________________________________________**__**_**__***_*_*_*******__*_____**_*_*_*__
#=GC scorecons_90           _______******_*___**_____*_*****_*__**_**__*******_***_*******__***********_*_*____*_***_*___*_****_*_***_*_**_**__*__**_______*_*__*____**_**_***_*_*_****___________________________________________**__**_**__***_*_*_*******__*_____**_*_*_*__
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