# STOCKHOLM 1.0
#=GF ID 3.30.70.960/FF/000003
#=GF DE MUC16 isoform 1
#=GF AC 3.30.70.960/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.954
#=GS 1ivzA00/1-132           AC Q9D1H1
#=GS 1ivzA00/1-132           OS Mus musculus
#=GS 1ivzA00/1-132           DE MCG4778
#=GS 1ivzA00/1-132           DR CATH; 1ivz; A:1-132; 
#=GS 1ivzA00/1-132           DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS 1ivzA00/1-132           DR GO; GO:0005615; GO:0009897; GO:0045409; GO:0050680; GO:0061045; 
#=GS Q8WXI7/12379-12508      AC Q8WXI7
#=GS Q8WXI7/12379-12508      OS Homo sapiens
#=GS Q8WXI7/12379-12508      DE Mucin-16
#=GS Q8WXI7/12379-12508      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q8WXI7/12379-12508      DR GO; GO:0002223; GO:0005515; GO:0005796; GO:0005886; GO:0007155; GO:0016266; GO:0019898; GO:0031982; GO:0070062; 
#=GS Q9D1H1/61-191           AC Q9D1H1
#=GS Q9D1H1/61-191           OS Mus musculus
#=GS Q9D1H1/61-191           DE MCG4778
#=GS Q9D1H1/61-191           DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q9D1H1/61-191           DR GO; GO:0005615; GO:0009897; GO:0045409; GO:0050680; GO:0061045; 
#=GS A0A140LIA5/165-295      AC A0A140LIA5
#=GS A0A140LIA5/165-295      OS Mus musculus
#=GS A0A140LIA5/165-295      DE Mucin 16
#=GS A0A140LIA5/165-295      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A140LIA5/165-295      DR GO; GO:0005615; GO:0009897; GO:0045409; GO:0050680; GO:0061045; 
#=GS A0A140LJ72/7720-7847    AC A0A140LJ72
#=GS A0A140LJ72/7720-7847    OS Mus musculus
#=GS A0A140LJ72/7720-7847    DE Mucin 16
#=GS A0A140LJ72/7720-7847    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A140LJ72/7720-7847    DR GO; GO:0005615; GO:0009897; GO:0045409; GO:0050680; GO:0061045; 
#=GS A0A140LI05/1808-1935    AC A0A140LI05
#=GS A0A140LI05/1808-1935    OS Mus musculus
#=GS A0A140LI05/1808-1935    DE Mucin 16
#=GS A0A140LI05/1808-1935    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A140LI05/1808-1935    DR GO; GO:0005615; GO:0009897; GO:0045409; GO:0050680; GO:0061045; 
#=GS A0A024R7C8/86-214       AC A0A024R7C8
#=GS A0A024R7C8/86-214       OS Homo sapiens
#=GS A0A024R7C8/86-214       DE HCG21930, isoform CRA_a
#=GS A0A024R7C8/86-214       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS M0QZZ9/466-595          AC M0QZZ9
#=GS M0QZZ9/466-595          OS Homo sapiens
#=GS M0QZZ9/466-595          DE Mucin-16
#=GS M0QZZ9/466-595          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS M0R2S7/466-595          AC M0R2S7
#=GS M0R2S7/466-595          OS Homo sapiens
#=GS M0R2S7/466-595          DE Mucin-16
#=GS M0R2S7/466-595          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS B3KY81/889-1018         AC B3KY81
#=GS B3KY81/889-1018         OS Homo sapiens
#=GS B3KY81/889-1018         DE cDNA FLJ46662 fis, clone TRACH3006800, highly similar to Homo sapiens mucin 16, cell surface associated (MUC16), mRNA
#=GS B3KY81/889-1018         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS M0R2Y5/246-375          AC M0R2Y5
#=GS M0R2Y5/246-375          OS Homo sapiens
#=GS M0R2Y5/246-375          DE Mucin-16
#=GS M0R2Y5/246-375          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS K7E488/6-132            AC K7E488
#=GS K7E488/6-132            OS Monodelphis domestica
#=GS K7E488/6-132            DE Uncharacterized protein
#=GS K7E488/6-132            DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS D3ZM49/45-176           AC D3ZM49
#=GS D3ZM49/45-176           OS Rattus norvegicus
#=GS D3ZM49/45-176           DE Uncharacterized protein
#=GS D3ZM49/45-176           DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS A0A0D9R602/422-551      AC A0A0D9R602
#=GS A0A0D9R602/422-551      OS Chlorocebus sabaeus
#=GS A0A0D9R602/422-551      DE Uncharacterized protein
#=GS A0A0D9R602/422-551      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS H2NXF3/342-473          AC H2NXF3
#=GS H2NXF3/342-473          OS Pongo abelii
#=GS H2NXF3/342-473          DE Uncharacterized protein
#=GS H2NXF3/342-473          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A2J8LX28/12360-12489  AC A0A2J8LX28
#=GS A0A2J8LX28/12360-12489  OS Pan troglodytes
#=GS A0A2J8LX28/12360-12489  DE MUC16 isoform 1
#=GS A0A2J8LX28/12360-12489  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS H9H8W3/256-383          AC H9H8W3
#=GS H9H8W3/256-383          OS Monodelphis domestica
#=GS H9H8W3/256-383          DE Uncharacterized protein
#=GS H9H8W3/256-383          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS K7E1M2/193-321          AC K7E1M2
#=GS K7E1M2/193-321          OS Monodelphis domestica
#=GS K7E1M2/193-321          DE Uncharacterized protein
#=GS K7E1M2/193-321          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS H2NXF4/4194-4325        AC H2NXF4
#=GS H2NXF4/4194-4325        OS Pongo abelii
#=GS H2NXF4/4194-4325        DE Uncharacterized protein
#=GS H2NXF4/4194-4325        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A2J8S1M2/10636-10764  AC A0A2J8S1M2
#=GS A0A2J8S1M2/10636-10764  OS Pongo abelii
#=GS A0A2J8S1M2/10636-10764  DE MUC16 isoform 1
#=GS A0A2J8S1M2/10636-10764  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GF SQ 20
1ivzA00/1-132                   GSSGSSGSSSSQHFNLNFTITNLPYSQDIAQPSTTKYQQTKRSIENALNQLFRNSSIKSYFSDCQVLAFRSVSNNNNHTGVDSLCNFSPL--ARRVDRVAIYEEFLRMTHNGTQLLNFTLDRKSVFVDSGPSSG
Q8WXI7/12379-12508              --TIMAAGPLLVPFTLNFTITNLQYGEDMGHPGSRKFNTTERVLQGLLGPIFKNTSVGPLYSGCRLTSLRS-EKDGAATGVDAICIHHLDPKSPGLNRERLYWELSQLTNGIKELGPYTLDRNSLYVNGFTHR-
Q9D1H1/61-191                   -AEIPTTSSSSQHFNLNFTITNLPYSQDIAQPSTTKYQQTKRSIENALNQLFRNSSIKSYFSDCQVLAFRSVSNNNNHTGVDSLCNFSPL--ARRVDRVAIYEEFLRMTHNGTQLLNFTLDRKSVFVDGYSQNR
A0A140LIA5/165-295              -TLSTVPGSPLVPFIINFTITNLEYEEGMSHAGSWKFNATEKILQRLLWSLFNKTSIGLLYSDCRLALLRP-EKDGAATGVDAICTHHAGPIGPGLDSERVFWELCNLTNNVTKLGPYTLDKNSLYINGYTHQ-
A0A140LJ72/7720-7847            TESTTAVGYHLKTVTVSFTISNLPYSAHMN-NGSAVFNSTETVLKHLLEPLLHN---GSFNSSCRLDSLRP-EKNGTATAVEAICTYYHNAANSGIDTQELYSELSHLTYGITQLGNYTLDQESLHVSGYNEP-
A0A140LI05/1808-1935            TESTTAVGYHLKTVTVSFTISNLPYSAHMN-NGSAVFNSTETVLKHLLEPLLHN---GSFNSSCRLDSLRP-EKNGTATAVEAICTYYHNAANSGIDTQELYSELSHLTYGITQLGNYTLDQESLHVSGYNEP-
A0A024R7C8/86-214               --GPSAASHLLILFTLNFTITNLRYEENMW-PGSRKFNTTERVLQGLLRPLFKNTSVGPLYSGCRLTLLRP-EKDGEATGVDAICTHRPDPTGPGLDREQLYLELSQLTHSITELGPYTLDRDSLYVNGFTHR-
M0QZZ9/466-595                  --GPSAASPLLVLFTLNFTITNLRYEENMQHPGSRKFNTTERVLQGLLRSLFKSTSVGPLYSGCRLTLLRP-EKDGTATGVDAICTHHPDPKSPRLDREQLYWELSQLTHNITELGPYALDNDSLFVNGFTHR-
M0R2S7/466-595                  --GPSAASPLLVLFTLNFTITNLRYEENMQHPGSRKFNTTERVLQGLLRSLFKSTSVGPLYSGCRLTLLRP-EKDGTATGVDAICTHHPDPKSPRLDREQLYWELSQLTHNITELGPYALDNDSLFVNGFTHR-
B3KY81/889-1018                 --GPSAASPLLVLFTLNFTITNLRYEENMQHPGSRKFNTTERVLQGLLRSLFKSTSVGPLYSGCRLTLLRP-EKDGTATGVDAICTHHPDPKSPRLDREQLYWELSQLTHNITELGPYALDNDSLFVNGFTHR-
M0R2Y5/246-375                  --GPSAASPLLVLFTLNFTITNLRYEENMQHPGSRKFNTTERVLQGLLRSLFKSTSVGPLYSGCRLTLLRP-EKDGTATGVDAICTHHPDPKSPRLDREQLYWELSQLTHNITELGPYALDNDSLFVNGFTHR-
K7E488/6-132                    -FCTVSWSSYYKNFTLSFTITNMFYTTKMNQKDSRTFEAAEHILQILLKVLFGSSRIGSQYSGCSDLSLRS-LRNRIATGVDILCTFKKYSSNHVLDKKVVYWELIEQL-CTRKLKHLVIDNDSLIVNGK----
D3ZM49/45-176                   ALNTTTGELSEELFTVNFTINNLRYSADMSQIGSPKFNITDTLMQHLLSSLFQRSSLGPLYTGCRVDTLKS-VKNGAQTQVDVLCTYHQVFNSRGLPAKSIFYDLSWQTHGITKLGPYSLDKDSLFINGYNEP-
A0A0D9R602/422-551              -ASPTTAGPVLVPFTLNFTITNLKYEEDMRRPGSRKFNTTERVLQSLLGPMFKNTSVGPLYSGCRLTLLRS-EKDGAATGVDAICTHRLDPKSPGVDRKQLYWELSQLTHGIKELGPYTLDRNSLYVNGFTY--
H2NXF3/342-473                  SEATTAMGYHLKTLTLNFTISNLQYSPDMG-KGSATFNSTERVLQHLLRPLFQKSSMGPFYLGCQLISLRP-EKDGAATGVDTSCTYHPDPVGPGLDIQQLYWELSQLTHGVTQLGFYVLDRDSLFINGYAPQN
A0A2J8LX28/12360-12489          --TIMAAGPLLVPFTLNFTITNLQYGEDMGHPGSRQFNTTERFLQGLLGPIFKNTSVGPLYSGCRLTSLRS-EKDGAATGVDAICTHHLDPKSPRLNREWLYWELSQLTNGIKELGPYTLDSNSLYVNGFTHR-
H9H8W3/256-383                  ----DAGRYNWKSFILNFTITNMFYTTKMAQRDSSTFRLPECFLQRMFKVLFERSSLGFQYCGCNVILLRS-MKNGAATGVEVICFYKEVFSVPVLDKKKIYQELSQETNGITRLGHYILDKKSLYVDGYNPQ-
K7E1M2/193-321                  ---AIAGRYNWKTFILNFTITNMFYTTKMAQRDSSTFRLPECFLQRMFKVLFERSSLGSQYCGCNVILLRS-MKNGAATGVEVICFYKEVFSVPVLDKKKIYQELSQETNGITRLGHYILDKKSLYVDGYNPQ-
H2NXF4/4194-4325                PSSTATTVPFMVPFTLNFTITNLHYEEDMLNPGSRKFHATYRELQGLLKPLFRNSSLEYLYSGCRLASLRP-EKDSSATAVDAICTHRPDPEGLGLDRERLYSELSNLTNGIQELGRYTLDRNSLYVNGFTHR-
A0A2J8S1M2/10636-10764          --TIIAAGPLLVPFTLNFTITNLQYGEDMGHPGSRKFNTTERVLQSLLGPIFKNTSVGPLYSGCRLTSL-S-KKDGAATGVDAICIRHLDPKGPGLNREQLYWELSQLTNGIKELGPYTLDSNSLYVNGFTHQ-
#=GC scorecons                  00234534434437677999697394447334674585376547636734774546464466695534776047664696975695543332444675436838765584555596475894597676854330
#=GC scorecons_70               _____________*_********_*___*____*__*__**__**_**__**_____*__****____**___***_*****_**__________**____*_**___*_____*__*_**__**_*_*_____
#=GC scorecons_80               _____________*__****_**_*___*____*__*__*___*___*__**___________*____**___*____*_**__*________________*_**___*_____*__*_**__**_*_*_____
#=GC scorecons_90               _________________***_*__*___________*__________________________*______________*_*___*________________*_*____*_____*____**__*____*_____
//