# STOCKHOLM 1.0
#=GF ID 3.30.70.660/FF/000019
#=GF DE tRNA pseudouridine synthase
#=GF AC 3.30.70.660/FF/000019
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 88.250
#=GS F4JZU2/262-332_394-458  AC F4JZU2
#=GS F4JZU2/262-332_394-458  OS Arabidopsis thaliana
#=GS F4JZU2/262-332_394-458  DE tRNA pseudouridine synthase
#=GS F4JZU2/262-332_394-458  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4JZU2/262-332_394-458  DR GO; GO:0009982; 
#=GS F6HT31/279-420          AC F6HT31
#=GS F6HT31/279-420          OS Vitis vinifera
#=GS F6HT31/279-420          DE tRNA pseudouridine synthase
#=GS F6HT31/279-420          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS B8C9R0/287-433          AC B8C9R0
#=GS B8C9R0/287-433          OS Thalassiosira pseudonana
#=GS B8C9R0/287-433          DE tRNA pseudouridine synthase
#=GS B8C9R0/287-433          DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS H3GHX8/136-292          AC H3GHX8
#=GS H3GHX8/136-292          OS Phytophthora ramorum
#=GS H3GHX8/136-292          DE tRNA pseudouridine synthase
#=GS H3GHX8/136-292          DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A1D6LQ69/165-332      AC A0A1D6LQ69
#=GS A0A1D6LQ69/165-332      OS Zea mays
#=GS A0A1D6LQ69/165-332      DE tRNA pseudouridine synthase
#=GS A0A1D6LQ69/165-332      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1KPQ1/255-433          AC I1KPQ1
#=GS I1KPQ1/255-433          OS Glycine max
#=GS I1KPQ1/255-433          DE tRNA pseudouridine synthase
#=GS I1KPQ1/255-433          DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A1W0VU61/245-412      AC A0A1W0VU61
#=GS A0A1W0VU61/245-412      OS Sorghum bicolor
#=GS A0A1W0VU61/245-412      DE tRNA pseudouridine synthase
#=GS A0A1W0VU61/245-412      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A1D6LQ68/248-415      AC A0A1D6LQ68
#=GS A0A1D6LQ68/248-415      OS Zea mays
#=GS A0A1D6LQ68/248-415      DE tRNA pseudouridine synthase
#=GS A0A1D6LQ68/248-415      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1W0VU60/141-308      AC A0A1W0VU60
#=GS A0A1W0VU60/141-308      OS Sorghum bicolor
#=GS A0A1W0VU60/141-308      DE tRNA pseudouridine synthase
#=GS A0A1W0VU60/141-308      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A0R0K9F1/198-376      AC A0A0R0K9F1
#=GS A0A0R0K9F1/198-376      OS Glycine max
#=GS A0A0R0K9F1/198-376      DE tRNA pseudouridine synthase
#=GS A0A0R0K9F1/198-376      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 10
F4JZU2/262-332_394-458          -----------------SED------------DELEIEETSNALEVVEKP--SDFSVSKVDQLLQHLQGKVLSYKMFARDTKAARNEGPPTECFMYHARAAEGR-------------RVMCVELVANRFLRKMVRVLVATSIREA--AAGAEDDALLKLLEASCRRATAPPAPSEGLCLFDV----
F6HT31/279-420                  ---------------------------------ENLIFDDDGEFESRKKP--STFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFS---DDGEGTKVMCIELVANRFLRKMVRVLVATSIREA--AAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDV----
B8C9R0/287-433                  -CRAYIYLIDV------NDDASD---------------------AITPKI--TRHIVPKLNSVLKTLEGKELDYLAMSHGKVKTQT----TLCTLLHARAGIVEWKCNNDSESPKRKQAICIELVGDRFLRRMVRLLVATALREASGADGCDDNALLNILTSMDRTYRARAAPPDGLIFVG-----
H3GHX8/136-292                  KRKRYEY---------------------ELIAGGLRPVAHRRNVWHVRKPLDVASMQAAVEQLMAPPTTKDFSSFTPQKSVDSDRGNVCTVSAIELHAEKLDGRGDAQYEDDVATR---IRLVFEGNRFRYKMVRNLVGTIVDVG--LGRLSPDDIPAILAAKNRGNAGQGAPPQGLTLVWVK---
A0A1D6LQ69/165-332              KWRRYMYIFPL------DEDAD-------LILGEAQSSKTLENSEHNIKP--QSFDVSKVDEILKPLAGKTLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHSANE-DHKGGMVVMCVELVANRFLRKMVRVLVATAIREA--AAGAGADALLNLMEATDRRATAPPAPPEGLCLVDVGYED
I1KPQ1/255-433                  KWRRYLYIFPLTNGGYTDQSSDNGEFYDSFKYNEIHDSASKDELENEKKS--YAFSISKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPTECFVYHARAMEVKLPAT---DHGEETKVMCVELVANRFLRKMVRVLVATSIREA--AAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTE
A0A1W0VU61/245-412              KWRRYMYIFPL------DEDAN-------LILGEAHSSKILENSEHNIKP--QSFDVAKVDKILKTLAGKTLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHYANE-DYKEGMMVMCVELVANRFLRKMVRVLVATAIREA--AAGAGDDALLNLMEATDRRATAPPAPPEGLCLIDVGYED
A0A1D6LQ68/248-415              KWRRYMYIFPL------DEDAD-------LILGEAQSSKTLENSEHNIKP--QSFDVSKVDEILKPLAGKTLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHSANE-DHKGGMVVMCVELVANRFLRKMVRVLVATAIREA--AAGAGADALLNLMEATDRRATAPPAPPEGLCLVDVGYED
A0A1W0VU60/141-308              KWRRYMYIFPL------DEDAN-------LILGEAHSSKILENSEHNIKP--QSFDVAKVDKILKTLAGKTLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHYANE-DYKEGMMVMCVELVANRFLRKMVRVLVATAIREA--AAGAGDDALLNLMEATDRRATAPPAPPEGLCLIDVGYED
A0A0R0K9F1/198-376              KWRRYLYIFPLTNGRYTDQSNDNGHFYNSCKYNEIHDSASKDELENGKKS--YMFSTSKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPTECFVYHARAMEVKPPTT---DHGEETKVMCVELVADRFLRKMVRVLVATSIREA--AAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTE
#=GC scorecons                  334452522220000003332100000002212522232223324333950033534567545753747937764555655455742445756545967633452223120622332256666766799667999599794666700657544767546647449555755997599576562111
#=GC scorecons_70               ________________________________________________*_________**___*__*_**_***____*_____*_____*_*___****___________________****************_****_****__*_*___***__**_*__*___*__***_**_**_*____
#=GC scorecons_80               ________________________________________________*__________*___*_____*_**___________*___________*__________________________*___**__****_****____*________*_*_____*__*___*__***_**_*_______
#=GC scorecons_90               ________________________________________________*____________________*__________________________*______________________________**___***_**_*________________________*______**__**_________
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